RNA–Protein interactions for RNA: ENST00000246117.8

NCLN-201, Transcript of nicalin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCLN, Length 4,005 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCLN-201ENST00000246117 ZNF292O60281 2723 aa10.77□□□□□ -0.69
NCLN-201ENST00000246117 FAM104BQ5XKR9 115 aa10.77□□□□□ -0.69
NCLN-201ENST00000246117 AKAP13Q12802 2813 aa10.77□□□□□ -0.69
NCLN-201ENST00000246117 TNFRSF6BO95407 300 aa10.77□□□□□ -0.69
NCLN-201ENST00000246117 LTAP01374 205 aa10.77□□□□□ -0.69
NCLN-201ENST00000246117 RAB9AP51151 201 aa10.77□□□□□ -0.69
NCLN-201ENST00000246117 TMEM95Q3KNT9 176 aa10.77□□□□□ -0.69
NCLN-201ENST00000246117 TEX22C9J3V5 150 aa10.76□□□□□ -0.69
NCLN-201ENST00000246117 H3BRN7 92 aa10.76□□□□□ -0.69
NCLN-201ENST00000246117 I3L2K1 104 aa10.76□□□□□ -0.69
NCLN-201ENST00000246117 LOXL1Q08397 574 aaPredicted RBP10.76□□□□□ -0.69
NCLN-201ENST00000246117 UBE2V1Q13404 147 aa10.76□□□□□ -0.69
NCLN-201ENST00000246117 FOXE3Q13461 319 aa10.76□□□□□ -0.69
NCLN-201ENST00000246117 OR2K2Q8NGT1 345 aa10.76□□□□□ -0.69
NCLN-201ENST00000246117 KIR2DL4Q99706 377 aa10.76□□□□□ -0.69
NCLN-201ENST00000246117 NPFFR1Q9GZQ6 430 aa10.76□□□□□ -0.69
NCLN-201ENST00000246117 KAAG1Q9UBP8 84 aa10.76□□□□□ -0.69
NCLN-201ENST00000246117 IGLV1-47P01700 117 aa10.76□□□□□ -0.69
NCLN-201ENST00000246117 HERVK_113P61574 105 aa10.76□□□□□ -0.69
NCLN-201ENST00000246117 CR1LQ2VPA4 569 aa10.76□□□□□ -0.69
NCLN-201ENST00000246117 TTC9CQ8N5M4 171 aa10.76□□□□□ -0.69
NCLN-201ENST00000246117 TACC2O95359 2948 aa10.76□□□□□ -0.69
NCLN-201ENST00000246117 PCP2Q8IVA1 136 aa10.75□□□□□ -0.69
NCLN-201ENST00000246117 MRPL16Q9NX20 251 aaKnown RBP10.75□□□□□ -0.69
NCLN-201ENST00000246117 LINC01548A6NM66 108 aa10.75□□□□□ -0.69
NCLN-201ENST00000246117 SLC50A1Q9BRV3 221 aa10.75□□□□□ -0.69
NCLN-201ENST00000246117 DPM2O94777 84 aa10.75□□□□□ -0.69
NCLN-201ENST00000246117 IGKCP01834 107 aa10.75□□□□□ -0.69
NCLN-201ENST00000246117 ZFP36P26651 326 aaKnown RBP10.75□□□□□ -0.69
NCLN-201ENST00000246117 KIR3DS1Q14943 382 aa10.75□□□□□ -0.69
NCLN-201ENST00000246117 OR4X2Q8NGF9 303 aa10.75□□□□□ -0.69
NCLN-201ENST00000246117 WIPF2Q8TF74 440 aaPredicted RBP10.75□□□□□ -0.69
NCLN-201ENST00000246117 ITLN2Q8WWU7 325 aaPredicted RBP10.75□□□□□ -0.69
NCLN-201ENST00000246117 TRAV12-2A0A075B6T6 113 aa10.74□□□□□ -0.69
NCLN-201ENST00000246117 A0A1B0GW15 77 aa10.74□□□□□ -0.69
NCLN-201ENST00000246117 KNCNA6PVL3 124 aa10.74□□□□□ -0.69
NCLN-201ENST00000246117 ATP5LO75964 103 aa10.74□□□□□ -0.69
NCLN-201ENST00000246117 RHPN1-AS1Q9BWJ2 59 aa10.74□□□□□ -0.69
NCLN-201ENST00000246117 ZNF492Q9P255 531 aa10.74□□□□□ -0.69
NCLN-201ENST00000246117 FAM231BA6NCW3 169 aa10.74□□□□□ -0.69
NCLN-201ENST00000246117 K7ERJ3 54 aa10.74□□□□□ -0.69
NCLN-201ENST00000246117 PAX1P15863 534 aa10.74□□□□□ -0.69
NCLN-201ENST00000246117 ANKRD39Q53RE8 183 aa10.74□□□□□ -0.69
NCLN-201ENST00000246117 NXT2Q9NPJ8 142 aaKnown RBP10.74□□□□□ -0.69
NCLN-201ENST00000246117 A0A0G2JLM5 398 aa10.73□□□□□ -0.69
NCLN-201ENST00000246117 M0R1W7 72 aa10.73□□□□□ -0.69
NCLN-201ENST00000246117 ADAMTS20P59510 1910 aa10.73□□□□□ -0.69
NCLN-201ENST00000246117 GAGE12BA1L429 117 aa10.73□□□□□ -0.69
NCLN-201ENST00000246117 NPC2P61916 151 aa10.73□□□□□ -0.69
NCLN-201ENST00000246117 C8orf86Q6ZUL3 223 aa10.73□□□□□ -0.69
NCLN-201ENST00000246117 A0A1B0GWB2 263 aa10.73□□□□□ -0.69
NCLN-201ENST00000246117 CCL25O15444 150 aa10.73□□□□□ -0.69
NCLN-201ENST00000246117 LINC00310P59036 64 aa10.73□□□□□ -0.69
NCLN-201ENST00000246117 CDSNQ15517 529 aa10.73□□□□□ -0.69
NCLN-201ENST00000246117 RNF5Q99942 180 aa10.73□□□□□ -0.69
NCLN-201ENST00000246117 TMEM8BA6NDV4 472 aa10.72□□□□□ -0.69
NCLN-201ENST00000246117 AGPAT4-IT1Q9H0P7 198 aa10.72□□□□□ -0.69
NCLN-201ENST00000246117 SNRPD3P62318 126 aaKnown RBP10.72□□□□□ -0.69
NCLN-201ENST00000246117 MOB4Q9Y3A3 225 aa10.72□□□□□ -0.69
NCLN-201ENST00000246117 IGHV7-81A0A0B4J1V7 117 aa10.72□□□□□ -0.69
NCLN-201ENST00000246117 TRAV21A0A0B4J279 112 aa10.72□□□□□ -0.69
NCLN-201ENST00000246117 CTSGP08311 255 aa10.72□□□□□ -0.69
NCLN-201ENST00000246117 VWC2LB2RUY7 222 aa10.71□□□□□ -0.69
NCLN-201ENST00000246117 BLCAPP62952 87 aa10.71□□□□□ -0.69
NCLN-201ENST00000246117 C3orf36Q3SXR2 165 aa10.71□□□□□ -0.69
NCLN-201ENST00000246117 DTX2Q86UW9 622 aa10.71□□□□□ -0.69
NCLN-201ENST00000246117 ZNF747Q9BV97 191 aa10.71□□□□□ -0.69
NCLN-201ENST00000246117 MRPS16Q9Y3D3 137 aaKnown RBP10.71□□□□□ -0.69
NCLN-201ENST00000246117 ZNF815PA8K554 130 aa10.71□□□□□ -0.69
NCLN-201ENST00000246117 SRSF1Q07955 248 aaKnown RBP eCLIP10.71□□□□□ -0.695e-9■□□□□ 8.5
NCLN-201ENST00000246117 CFHR4Q92496 578 aa10.71□□□□□ -0.69
NCLN-201ENST00000246117 DCHS1Q96JQ0 3298 aa10.71□□□□□ -0.7
NCLN-201ENST00000246117 MINOS1Q5TGZ0 78 aa10.71□□□□□ -0.7
NCLN-201ENST00000246117 LYPD1Q8N2G4 141 aa10.71□□□□□ -0.7
NCLN-201ENST00000246117 MINOS1-NBL1R4GNA1 71 aa10.71□□□□□ -0.7
NCLN-201ENST00000246117 CIDEAO60543 219 aa10.7□□□□□ -0.7
NCLN-201ENST00000246117 LGALS3P17931 250 aaKnown RBP10.7□□□□□ -0.7
NCLN-201ENST00000246117 SYNJ2BPP57105 145 aa10.7□□□□□ -0.7
NCLN-201ENST00000246117 LAGE3Q14657 143 aa10.7□□□□□ -0.7
NCLN-201ENST00000246117 MRPL35Q9NZE8 188 aaKnown RBP10.7□□□□□ -0.7
NCLN-201ENST00000246117 KLK9Q9UKQ9 250 aa10.7□□□□□ -0.7
NCLN-201ENST00000246117 MSRB2Q9Y3D2 182 aa10.7□□□□□ -0.7
NCLN-201ENST00000246117 PPBPP02775 128 aa10.7□□□□□ -0.7
NCLN-201ENST00000246117 GFRA4Q9GZZ7 299 aa10.7□□□□□ -0.7
NCLN-201ENST00000246117 CT83Q5H943 113 aa10.7□□□□□ -0.7
NCLN-201ENST00000246117 SAMD5Q5TGI4 173 aa10.7□□□□□ -0.7
NCLN-201ENST00000246117 COX6B1P14854 86 aa10.69□□□□□ -0.7
NCLN-201ENST00000246117 ADORA2A-AS1P86434 159 aa10.69□□□□□ -0.7
NCLN-201ENST00000246117 DUX3Q96PT4 197 aa10.69□□□□□ -0.7
NCLN-201ENST00000246117 CSTL1Q9H114 145 aa10.69□□□□□ -0.7
NCLN-201ENST00000246117 MS4A6AQ9H2W1 248 aa10.69□□□□□ -0.7
NCLN-201ENST00000246117 CHTOPQ9Y3Y2 248 aaKnown RBP10.69□□□□□ -0.7
NCLN-201ENST00000246117 COL5A1P20908 1838 aaPredicted RBP10.69□□□□□ -0.7
NCLN-201ENST00000246117 COL12A1Q99715 3063 aa10.69□□□□□ -0.7
NCLN-201ENST00000246117 FANCD2OSQ96PS1 177 aa10.69□□□□□ -0.7
NCLN-201ENST00000246117 GNRH2O43555 120 aa10.69□□□□□ -0.7
NCLN-201ENST00000246117 ZNF80P51504 273 aaPredicted RBP10.69□□□□□ -0.7
NCLN-201ENST00000246117 PDE6HQ13956 83 aa10.69□□□□□ -0.7
NCLN-201ENST00000246117 SPINK13Q1W4C9 94 aa10.69□□□□□ -0.7
NCLN-201ENST00000246117 BVES-AS1Q5T3Y7 98 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 118 ms