RNA–Protein interactions for RNA: ENST00000234420.9

MSH6-201, Transcript of mutS homolog 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH6, Length 7,476 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-201ENST00000234420 IGKV1D-8A0A087WSZ0 117 aa8.99□□□□□ -0.97
MSH6-201ENST00000234420 IGHMP01871 453 aa8.99□□□□□ -0.97
MSH6-201ENST00000234420 ACYP1P07311 99 aa8.99□□□□□ -0.97
MSH6-201ENST00000234420 MORN2Q502X0 79 aa8.99□□□□□ -0.97
MSH6-201ENST00000234420 WFDC11Q8NEX6 87 aa8.99□□□□□ -0.97
MSH6-201ENST00000234420 NPYP01303 97 aa8.99□□□□□ -0.97
MSH6-201ENST00000234420 PNRC2Q9NPJ4 139 aaKnown RBP8.99□□□□□ -0.97
MSH6-201ENST00000234420 CSRP1P21291 193 aaKnown RBP8.99□□□□□ -0.97
MSH6-201ENST00000234420 IGHV1OR15-1A0A075B7D0 117 aa8.98□□□□□ -0.97
MSH6-201ENST00000234420 RNF138Q8WVD3 245 aa8.98□□□□□ -0.97
MSH6-201ENST00000234420 ZNF503Q96F45 646 aa8.98□□□□□ -0.97
MSH6-201ENST00000234420 FANCD2OSQ96PS1 177 aa8.98□□□□□ -0.97
MSH6-201ENST00000234420 TMEM131Q92545 1883 aa8.98□□□□□ -0.97
MSH6-201ENST00000234420 DSCAMO60469 2012 aa8.98□□□□□ -0.97
MSH6-201ENST00000234420 C2orf66Q6UXQ4 117 aa8.98□□□□□ -0.97
MSH6-201ENST00000234420 MRPL35Q9NZE8 188 aaKnown RBP8.98□□□□□ -0.97
MSH6-201ENST00000234420 IGLC7A0M8Q6 106 aa8.98□□□□□ -0.97
MSH6-201ENST00000234420 XCL1P47992 114 aa8.98□□□□□ -0.97
MSH6-201ENST00000234420 NDUFA12Q9UI09 145 aa8.98□□□□□ -0.97
MSH6-201ENST00000234420 IGHV2-70DA0A0C4DH43 119 aa8.98□□□□□ -0.97
MSH6-201ENST00000234420 LYPD6BQ8NI32 183 aa8.98□□□□□ -0.97
MSH6-201ENST00000234420 RNF183Q96D59 192 aa8.98□□□□□ -0.97
MSH6-201ENST00000234420 NOP10Q9NPE3 64 aaKnown RBP8.98□□□□□ -0.97
MSH6-201ENST00000234420 ZNRD1Q9P1U0 126 aa8.98□□□□□ -0.97
MSH6-201ENST00000234420 IGLV10-54A0A075B6I4 117 aa8.98□□□□□ -0.97
MSH6-201ENST00000234420 RHODO00212 210 aa8.98□□□□□ -0.97
MSH6-201ENST00000234420 WIPF2Q8TF74 440 aaPredicted RBP8.98□□□□□ -0.97
MSH6-201ENST00000234420 A0A0A6YYD4 124 aa8.97□□□□□ -0.97
MSH6-201ENST00000234420 WFDC2Q14508 124 aa8.97□□□□□ -0.97
MSH6-201ENST00000234420 GPHB5Q86YW7 130 aa8.97□□□□□ -0.97
MSH6-201ENST00000234420 RMI2Q96E14 147 aa8.97□□□□□ -0.97
MSH6-201ENST00000234420 ZC2HC1AQ96GY0 325 aa8.97□□□□□ -0.97
MSH6-201ENST00000234420 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.97□□□□□ -0.97
MSH6-201ENST00000234420 BUB3O43684 328 aa8.97□□□□□ -0.97
MSH6-201ENST00000234420 C10orf55Q5SWW7 151 aa8.97□□□□□ -0.97
MSH6-201ENST00000234420 LY96Q9Y6Y9 160 aa8.97□□□□□ -0.97
MSH6-201ENST00000234420 PLXNA3P51805 1871 aa8.97□□□□□ -0.97
MSH6-201ENST00000234420 DENND4CQ5VZ89 1909 aa8.97□□□□□ -0.97
MSH6-201ENST00000234420 CTSGP08311 255 aa8.97□□□□□ -0.97
MSH6-201ENST00000234420 MESP1Q9BRJ9 268 aa8.97□□□□□ -0.97
MSH6-201ENST00000234420 ATG2AQ2TAZ0 1938 aa8.97□□□□□ -0.97
MSH6-201ENST00000234420 TRAV13-2A0A0B4J235 113 aa8.97□□□□□ -0.97
MSH6-201ENST00000234420 HIST2H2BCQ6DN03 193 aa8.97□□□□□ -0.97
MSH6-201ENST00000234420 PLXNA4Q9HCM2 1894 aa8.97□□□□□ -0.97
MSH6-201ENST00000234420 YPEL1O60688 119 aa8.97□□□□□ -0.97
MSH6-201ENST00000234420 IGHV2-5P01817 119 aa8.97□□□□□ -0.97
MSH6-201ENST00000234420 YPEL2Q96QA6 119 aa8.97□□□□□ -0.97
MSH6-201ENST00000234420 TRBV7-1A0A0A6YYK4 115 aa8.97□□□□□ -0.97
MSH6-201ENST00000234420 ZSWIM8A7E2V4 1837 aa8.96□□□□□ -0.97
MSH6-201ENST00000234420 A0A0B4J2C4 111 aa8.96□□□□□ -0.97
MSH6-201ENST00000234420 ANKRD39Q53RE8 183 aa8.96□□□□□ -0.97
MSH6-201ENST00000234420 TRAV26-2A0A0B4J265 109 aa8.96□□□□□ -0.97
MSH6-201ENST00000234420 MST1LQ2TV78 715 aa8.96□□□□□ -0.97
MSH6-201ENST00000234420 SHANK1Q9Y566 2161 aa8.96□□□□□ -0.97
MSH6-201ENST00000234420 MP68P56378 58 aa8.96□□□□□ -0.98
MSH6-201ENST00000234420 ZNF497Q6ZNH5 498 aa8.96□□□□□ -0.98
MSH6-201ENST00000234420 OVOL3O00110 214 aa8.96□□□□□ -0.98
MSH6-201ENST00000234420 UBE2AP49459 152 aa8.96□□□□□ -0.98
MSH6-201ENST00000234420 SUPT4H1P63272 117 aaKnown RBP8.96□□□□□ -0.98
MSH6-201ENST00000234420 LGALS9BQ3B8N2 356 aa8.96□□□□□ -0.98
MSH6-201ENST00000234420 LGALS9CQ6DKI2 356 aa8.96□□□□□ -0.98
MSH6-201ENST00000234420 KLK5Q9Y337 293 aaPredicted RBP8.96□□□□□ -0.98
MSH6-201ENST00000234420 K7EMI3 77 aa8.96□□□□□ -0.98
MSH6-201ENST00000234420 NTF4P34130 210 aa8.95□□□□□ -0.98
MSH6-201ENST00000234420 TIRAPP58753 221 aa8.95□□□□□ -0.98
MSH6-201ENST00000234420 CCL24O00175 119 aa8.95□□□□□ -0.98
MSH6-201ENST00000234420 DKK2Q9UBU2 259 aa8.95□□□□□ -0.98
MSH6-201ENST00000234420 IGHV1-3A0A0C4DH29 117 aa8.95□□□□□ -0.98
MSH6-201ENST00000234420 PFN1P07737 140 aaKnown RBP8.95□□□□□ -0.98
MSH6-201ENST00000234420 CFC1BP0CG36 223 aa8.95□□□□□ -0.98
MSH6-201ENST00000234420 CFC1P0CG37 223 aa8.95□□□□□ -0.98
MSH6-201ENST00000234420 ORMDL1Q9P0S3 153 aa8.95□□□□□ -0.98
MSH6-201ENST00000234420 TRBV25-1A0A075B6N4 114 aa8.95□□□□□ -0.98
MSH6-201ENST00000234420 WISP3O95389 354 aaPredicted RBP8.94□□□□□ -0.98
MSH6-201ENST00000234420 CCL18P55774 89 aa8.94□□□□□ -0.98
MSH6-201ENST00000234420 TMEM141Q96I45 108 aa8.94□□□□□ -0.98
MSH6-201ENST00000234420 WISP1O95388 367 aa8.94□□□□□ -0.98
MSH6-201ENST00000234420 MLST8Q9BVC4 326 aa8.94□□□□□ -0.98
MSH6-201ENST00000234420 RHPN1-AS1Q9BWJ2 59 aa8.94□□□□□ -0.98
MSH6-201ENST00000234420 TRBV19A0A075B6N1 114 aa8.94□□□□□ -0.98
MSH6-201ENST00000234420 TMEM178BH3BS89 294 aa8.94□□□□□ -0.98
MSH6-201ENST00000234420 APRG1Q8IVJ8 170 aa8.94□□□□□ -0.98
MSH6-201ENST00000234420 CYYR1Q96J86 154 aa8.94□□□□□ -0.98
MSH6-201ENST00000234420 C4orf51C9J302 202 aa8.94□□□□□ -0.98
MSH6-201ENST00000234420 LY6G6CO95867 125 aa8.94□□□□□ -0.98
MSH6-201ENST00000234420 ZFP2Q6ZN57 461 aa8.94□□□□□ -0.98
MSH6-201ENST00000234420 NTN3O00634 580 aaPredicted RBP8.94□□□□□ -0.98
MSH6-201ENST00000234420 TRPT1Q86TN4 253 aaKnown RBP8.94□□□□□ -0.98
MSH6-201ENST00000234420 PCP2Q8IVA1 136 aa8.94□□□□□ -0.98
MSH6-201ENST00000234420 C8orf49Q96NF6 230 aa8.94□□□□□ -0.98
MSH6-201ENST00000234420 RETNQ9HD89 108 aa8.94□□□□□ -0.98
MSH6-201ENST00000234420 TRAV3A0A0B4J244 114 aa8.93□□□□□ -0.98
MSH6-201ENST00000234420 LYPD3O95274 346 aa8.93□□□□□ -0.98
MSH6-201ENST00000234420 ASPHD1Q5U4P2 390 aa8.93□□□□□ -0.98
MSH6-201ENST00000234420 LYPD6Q86Y78 171 aa8.93□□□□□ -0.98
MSH6-201ENST00000234420 DEFB125Q8N687 156 aa8.93□□□□□ -0.98
MSH6-201ENST00000234420 Q8N8P6 123 aa8.93□□□□□ -0.98
MSH6-201ENST00000234420 COL4A6Q14031 1691 aa8.93□□□□□ -0.98
MSH6-201ENST00000234420 LYL1P12980 280 aa8.93□□□□□ -0.98
MSH6-201ENST00000234420 MRPL51Q4U2R6 128 aaKnown RBP8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms