RNA–Protein interactions for RNA: ENST00000229829.6

HLA-DOA-201, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DOA, Length 3,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-201ENST00000229829 SPATA25Q9BR10 227 aa7.37□□□□□ -1.23
HLA-DOA-201ENST00000229829 TRAV40A0A0B4J280 105 aa7.36□□□□□ -1.23
HLA-DOA-201ENST00000229829 K7EIM0 57 aa7.36□□□□□ -1.23
HLA-DOA-201ENST00000229829 C12orf74Q32Q52 190 aa7.36□□□□□ -1.23
HLA-DOA-201ENST00000229829 ZFAND6Q6FIF0 208 aa7.36□□□□□ -1.23
HLA-DOA-201ENST00000229829 RNF125Q96EQ8 232 aa7.36□□□□□ -1.23
HLA-DOA-201ENST00000229829 CITED1Q99966 193 aa7.36□□□□□ -1.23
HLA-DOA-201ENST00000229829 GFRA4Q9GZZ7 299 aa7.36□□□□□ -1.23
HLA-DOA-201ENST00000229829 DOPEY2Q9Y3R5 2298 aa7.36□□□□□ -1.23
HLA-DOA-201ENST00000229829 MUC6Q6W4X9 2439 aa7.36□□□□□ -1.23
HLA-DOA-201ENST00000229829 TRBV7-9A0A0J9YWB2 115 aa7.36□□□□□ -1.23
HLA-DOA-201ENST00000229829 SIVA1O15304 175 aa7.36□□□□□ -1.23
HLA-DOA-201ENST00000229829 NDUFS7O75251 213 aa7.36□□□□□ -1.23
HLA-DOA-201ENST00000229829 IL4P05112 153 aa7.36□□□□□ -1.23
HLA-DOA-201ENST00000229829 ORMDL3Q8N138 153 aa7.36□□□□□ -1.23
HLA-DOA-201ENST00000229829 RNF152Q8N8N0 203 aa7.36□□□□□ -1.23
HLA-DOA-201ENST00000229829 KIR2DL4Q99706 377 aa7.36□□□□□ -1.23
HLA-DOA-201ENST00000229829 NGBQ9NPG2 151 aa7.36□□□□□ -1.23
HLA-DOA-201ENST00000229829 CELSR1Q9NYQ6 3014 aa7.36□□□□□ -1.23
HLA-DOA-201ENST00000229829 TRBV19A0A075B6N1 114 aa7.36□□□□□ -1.23
HLA-DOA-201ENST00000229829 HAX1O00165 279 aa7.36□□□□□ -1.23
HLA-DOA-201ENST00000229829 TIMM23O14925 209 aa7.36□□□□□ -1.23
HLA-DOA-201ENST00000229829 HOXB4P17483 251 aaPredicted RBP7.36□□□□□ -1.23
HLA-DOA-201ENST00000229829 LGALS9BQ3B8N2 356 aa7.36□□□□□ -1.23
HLA-DOA-201ENST00000229829 TTC32Q5I0X7 151 aa7.36□□□□□ -1.23
HLA-DOA-201ENST00000229829 LGALS9CQ6DKI2 356 aa7.36□□□□□ -1.23
HLA-DOA-201ENST00000229829 LINC01560Q8TB33 94 aa7.36□□□□□ -1.23
HLA-DOA-201ENST00000229829 C8orf49Q96NF6 230 aa7.36□□□□□ -1.23
HLA-DOA-201ENST00000229829 SOX21Q9Y651 276 aaPredicted RBP7.36□□□□□ -1.23
HLA-DOA-201ENST00000229829 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP7.35□□□□□ -1.23
HLA-DOA-201ENST00000229829 NPIPB5A8MRT5 1133 aa7.35□□□□□ -1.23
HLA-DOA-201ENST00000229829 FOXI1Q12951 378 aa7.35□□□□□ -1.23
HLA-DOA-201ENST00000229829 LYZL1Q6UWQ5 148 aa7.35□□□□□ -1.23
HLA-DOA-201ENST00000229829 SIGLEC15Q6ZMC9 328 aa7.35□□□□□ -1.23
HLA-DOA-201ENST00000229829 Q6ZUT4 128 aa7.35□□□□□ -1.23
HLA-DOA-201ENST00000229829 CEND1Q8N111 149 aa7.35□□□□□ -1.23
HLA-DOA-201ENST00000229829 ZNF491Q8N8L2 437 aa7.35□□□□□ -1.23
HLA-DOA-201ENST00000229829 TMEM14CQ9P0S9 112 aa7.35□□□□□ -1.23
HLA-DOA-201ENST00000229829 ATRXP46100 2492 aa7.35□□□□□ -1.23
HLA-DOA-201ENST00000229829 NPYP01303 97 aa7.35□□□□□ -1.23
HLA-DOA-201ENST00000229829 PIP4P2Q8N4L2 257 aa7.35□□□□□ -1.23
HLA-DOA-201ENST00000229829 PTPRQQ9UMZ3 2332 aa7.35□□□□□ -1.23
HLA-DOA-201ENST00000229829 IGKCP01834 107 aa7.35□□□□□ -1.23
HLA-DOA-201ENST00000229829 GRNP28799 593 aaKnown RBP7.35□□□□□ -1.23
HLA-DOA-201ENST00000229829 SHANK2-AS3Q9BTD1 123 aa7.35□□□□□ -1.23
HLA-DOA-201ENST00000229829 ONECUT1Q9UBC0 465 aa7.35□□□□□ -1.23
HLA-DOA-201ENST00000229829 TRAV8-2A0A0B4J237 113 aa7.34□□□□□ -1.23
HLA-DOA-201ENST00000229829 TMEM189A5PLL7 270 aa7.34□□□□□ -1.23
HLA-DOA-201ENST00000229829 SRSF2Q01130 221 aaKnown RBP7.34□□□□□ -1.23
HLA-DOA-201ENST00000229829 SCNM1Q9BWG6 230 aa7.34□□□□□ -1.23
HLA-DOA-201ENST00000229829 VPS13CQ709C8 3753 aa7.34□□□□□ -1.23
HLA-DOA-201ENST00000229829 LINC01549A6NIU2 74 aa7.33□□□□□ -1.24
HLA-DOA-201ENST00000229829 LINC01548A6NM66 108 aa7.33□□□□□ -1.24
HLA-DOA-201ENST00000229829 LY6LH3BQJ8 138 aa7.33□□□□□ -1.24
HLA-DOA-201ENST00000229829 H3BRN7 92 aa7.33□□□□□ -1.24
HLA-DOA-201ENST00000229829 IGHV3-23P01764 117 aa7.33□□□□□ -1.24
HLA-DOA-201ENST00000229829 GATA1P15976 413 aaPredicted RBP7.33□□□□□ -1.24
HLA-DOA-201ENST00000229829 KLRD1Q13241 179 aa7.33□□□□□ -1.24
HLA-DOA-201ENST00000229829 A0A096LNJ9 63 aa7.33□□□□□ -1.24
HLA-DOA-201ENST00000229829 MRPS12O15235 138 aaKnown RBP7.33□□□□□ -1.24
HLA-DOA-201ENST00000229829 ORM1P02763 201 aa7.33□□□□□ -1.24
HLA-DOA-201ENST00000229829 IGFL4Q6B9Z1 124 aa7.33□□□□□ -1.24
HLA-DOA-201ENST00000229829 NOTCH3Q9UM47 2321 aa7.33□□□□□ -1.24
HLA-DOA-201ENST00000229829 E9PLD3 99 aa7.33□□□□□ -1.24
HLA-DOA-201ENST00000229829 ZNF502Q8TBZ5 544 aa7.33□□□□□ -1.24
HLA-DOA-201ENST00000229829 HIF1ANQ9NWT6 349 aa7.33□□□□□ -1.24
HLA-DOA-201ENST00000229829 ERG28Q9UKR5 140 aa7.33□□□□□ -1.24
HLA-DOA-201ENST00000229829 IGHV3OR16-8A0A075B7F1 116 aa7.32□□□□□ -1.24
HLA-DOA-201ENST00000229829 HOXA3O43365 443 aaPredicted RBP7.32□□□□□ -1.24
HLA-DOA-201ENST00000229829 SNCGO76070 127 aa7.32□□□□□ -1.24
HLA-DOA-201ENST00000229829 GAGE2BQ13066 116 aa7.32□□□□□ -1.24
HLA-DOA-201ENST00000229829 C5orf64Q2M2E5 130 aa7.32□□□□□ -1.24
HLA-DOA-201ENST00000229829 GAGE2EQ4V326 116 aa7.32□□□□□ -1.24
HLA-DOA-201ENST00000229829 ZFP2Q6ZN57 461 aa7.32□□□□□ -1.24
HLA-DOA-201ENST00000229829 MAPKAPK5-AS1Q8N8E1 139 aa7.32□□□□□ -1.24
HLA-DOA-201ENST00000229829 TMEM75Q8N9X5 138 aa7.32□□□□□ -1.24
HLA-DOA-201ENST00000229829 BEX4Q9NWD9 120 aaPredicted RBP7.32□□□□□ -1.24
HLA-DOA-201ENST00000229829 MRPL35Q9NZE8 188 aaKnown RBP7.32□□□□□ -1.24
HLA-DOA-201ENST00000229829 GAGE2DQ9UEU5 116 aa7.32□□□□□ -1.24
HLA-DOA-201ENST00000229829 NCBP2LA6PVI3 153 aaKnown RBP7.32□□□□□ -1.24
HLA-DOA-201ENST00000229829 CD3EP07766 207 aa7.32□□□□□ -1.24
HLA-DOA-201ENST00000229829 RRN3P1Q2M238 152 aa7.32□□□□□ -1.24
HLA-DOA-201ENST00000229829 MRPL51Q4U2R6 128 aaKnown RBP7.32□□□□□ -1.24
HLA-DOA-201ENST00000229829 VKORC1Q9BQB6 163 aa7.32□□□□□ -1.24
HLA-DOA-201ENST00000229829 IGF2RP11717 2491 aa7.32□□□□□ -1.24
HLA-DOA-201ENST00000229829 CCDC179H3BU77 68 aa7.32□□□□□ -1.24
HLA-DOA-201ENST00000229829 DPM2O94777 84 aa7.32□□□□□ -1.24
HLA-DOA-201ENST00000229829 TMEM158Q8WZ71 300 aa7.32□□□□□ -1.24
HLA-DOA-201ENST00000229829 CREBBPQ92793 2442 aa7.31□□□□□ -1.24
HLA-DOA-201ENST00000229829 IGKV2-40A0A087WW87 121 aaPredicted RBP7.31□□□□□ -1.24
HLA-DOA-201ENST00000229829 IGKV2D-40P01614 121 aaPredicted RBP7.31□□□□□ -1.24
HLA-DOA-201ENST00000229829 HLA-DRB4P13762 266 aa7.31□□□□□ -1.24
HLA-DOA-201ENST00000229829 HES1Q14469 280 aa7.31□□□□□ -1.24
HLA-DOA-201ENST00000229829 ZNF672Q499Z4 452 aaPredicted RBP7.31□□□□□ -1.24
HLA-DOA-201ENST00000229829 NFE4Q86UQ8 179 aa7.31□□□□□ -1.24
HLA-DOA-201ENST00000229829 CDIP1Q9H305 208 aa7.31□□□□□ -1.24
HLA-DOA-201ENST00000229829 MAP1LC3AQ9H492 121 aa7.31□□□□□ -1.24
HLA-DOA-201ENST00000229829 MSRB1Q9NZV6 116 aa7.31□□□□□ -1.24
HLA-DOA-201ENST00000229829 HLA-DRB4X5D2U9 266 aa7.31□□□□□ -1.24
HLA-DOA-201ENST00000229829 IGHV3-35A0A0C4DH35 117 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms