RNA–Protein interactions for RNA: ENST00000227503.13

SF1-201, Transcript of splicing factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SF1, Length 2,850 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-201ENST00000227503 Q8NA96 180 aa10.97□□□□□ -0.65
SF1-201ENST00000227503 DYNLRB1Q9NP97 96 aa10.97□□□□□ -0.65
SF1-201ENST00000227503 MED13LQ71F56 2210 aa10.97□□□□□ -0.65
SF1-201ENST00000227503 LOC107984156A0A0G2JMH3 177 aa10.96□□□□□ -0.65
SF1-201ENST00000227503 VSTM5A8MXK1 200 aa10.96□□□□□ -0.65
SF1-201ENST00000227503 Q6AWC8 147 aa10.96□□□□□ -0.65
SF1-201ENST00000227503 MORN3Q6PF18 240 aaPredicted RBP10.96□□□□□ -0.65
SF1-201ENST00000227503 ARL17AQ8IVW1 177 aa10.96□□□□□ -0.65
SF1-201ENST00000227503 SCNM1Q9BWG6 230 aa10.96□□□□□ -0.65
SF1-201ENST00000227503 ASH1LQ9NR48 2969 aaKnown RBP10.96□□□□□ -0.65
SF1-201ENST00000227503 TEX22C9J3V5 150 aa10.96□□□□□ -0.66
SF1-201ENST00000227503 PSMB2P49721 201 aa10.96□□□□□ -0.66
SF1-201ENST00000227503 ZNF502Q8TBZ5 544 aa10.96□□□□□ -0.66
SF1-201ENST00000227503 TMEM14CQ9P0S9 112 aa10.96□□□□□ -0.66
SF1-201ENST00000227503 GFRALQ6UXV0 394 aa10.95□□□□□ -0.66
SF1-201ENST00000227503 ZNF575Q86XF7 245 aa10.95□□□□□ -0.66
SF1-201ENST00000227503 KIR2DL4Q99706 377 aa10.95□□□□□ -0.66
SF1-201ENST00000227503 IGHV1-3A0A0C4DH29 117 aa10.95□□□□□ -0.66
SF1-201ENST00000227503 IGHV3-23P01764 117 aa10.95□□□□□ -0.66
SF1-201ENST00000227503 Q6ZUT4 128 aa10.95□□□□□ -0.66
SF1-201ENST00000227503 SHANK2-AS3Q9BTD1 123 aa10.95□□□□□ -0.66
SF1-201ENST00000227503 SPTBN4Q9H254 2564 aa10.95□□□□□ -0.66
SF1-201ENST00000227503 IGF2RP11717 2491 aa10.95□□□□□ -0.66
SF1-201ENST00000227503 IGHV3-35A0A0C4DH35 117 aa10.95□□□□□ -0.66
SF1-201ENST00000227503 TRGV3P03979 118 aa10.95□□□□□ -0.66
SF1-201ENST00000227503 DEFB104AQ8WTQ1 72 aa10.95□□□□□ -0.66
SF1-201ENST00000227503 PPP1R27Q86WC6 154 aa10.94□□□□□ -0.66
SF1-201ENST00000227503 C1QTNF4Q9BXJ3 329 aa10.94□□□□□ -0.66
SF1-201ENST00000227503 RALYQ9UKM9 306 aaKnown RBP10.94□□□□□ -0.66
SF1-201ENST00000227503 PRSS29PA6NIE9 313 aa10.94□□□□□ -0.66
SF1-201ENST00000227503 BUB1B-PAK6H3BSN5 160 aa10.94□□□□□ -0.66
SF1-201ENST00000227503 LINC01549A6NIU2 74 aa10.93□□□□□ -0.66
SF1-201ENST00000227503 FAM90A27PA6NNH2 459 aa10.93□□□□□ -0.66
SF1-201ENST00000227503 H3BRN7 92 aa10.93□□□□□ -0.66
SF1-201ENST00000227503 I3L2K1 104 aa10.93□□□□□ -0.66
SF1-201ENST00000227503 SPRY2O43597 315 aa10.93□□□□□ -0.66
SF1-201ENST00000227503 HLA-DRB4P13762 266 aa10.93□□□□□ -0.66
SF1-201ENST00000227503 ZNF491Q8N8L2 437 aa10.93□□□□□ -0.66
SF1-201ENST00000227503 RNF125Q96EQ8 232 aa10.93□□□□□ -0.66
SF1-201ENST00000227503 HLA-DRB4X5D2U9 266 aa10.93□□□□□ -0.66
SF1-201ENST00000227503 TLN1Q9Y490 2541 aaKnown RBP10.93□□□□□ -0.66
SF1-201ENST00000227503 TRBV7-3A0A075B6L6 115 aa10.93□□□□□ -0.66
SF1-201ENST00000227503 ERCC8Q13216 396 aa10.93□□□□□ -0.66
SF1-201ENST00000227503 RPEQ96AT9 228 aa10.93□□□□□ -0.66
SF1-201ENST00000227503 PLGLAQ15195 96 aa10.92□□□□□ -0.66
SF1-201ENST00000227503 CFAP126Q5VTH2 177 aa10.92□□□□□ -0.66
SF1-201ENST00000227503 CARD19Q96LW7 228 aa10.92□□□□□ -0.66
SF1-201ENST00000227503 PRR25Q96S07 402 aa10.92□□□□□ -0.66
SF1-201ENST00000227503 B5MCH6 92 aa10.92□□□□□ -0.66
SF1-201ENST00000227503 LYNX1G3V0Z9 82 aa10.92□□□□□ -0.66
SF1-201ENST00000227503 MRPS12O15235 138 aaKnown RBP10.92□□□□□ -0.66
SF1-201ENST00000227503 LYNX1P0DP58 116 aa10.92□□□□□ -0.66
SF1-201ENST00000227503 Q6ZQT7 251 aa10.92□□□□□ -0.66
SF1-201ENST00000227503 PIFOQ8TCI5 191 aa10.92□□□□□ -0.66
SF1-201ENST00000227503 AAMDCQ9H7C9 122 aa10.92□□□□□ -0.66
SF1-201ENST00000227503 TRBV6-1A0A0K0K1D8 114 aa10.91□□□□□ -0.66
SF1-201ENST00000227503 H3BVH4 76 aa10.91□□□□□ -0.66
SF1-201ENST00000227503 ATRXP46100 2492 aa10.91□□□□□ -0.66
SF1-201ENST00000227503 PRR30Q53SZ7 412 aaPredicted RBP10.91□□□□□ -0.66
SF1-201ENST00000227503 DTX2Q86UW9 622 aa10.91□□□□□ -0.66
SF1-201ENST00000227503 UFC1Q9Y3C8 167 aa10.91□□□□□ -0.66
SF1-201ENST00000227503 B9A039 149 aa10.91□□□□□ -0.66
SF1-201ENST00000227503 K7EIM0 57 aa10.91□□□□□ -0.66
SF1-201ENST00000227503 HOXA3O43365 443 aaPredicted RBP10.91□□□□□ -0.66
SF1-201ENST00000227503 COL12A1Q99715 3063 aa10.9□□□□□ -0.66
SF1-201ENST00000227503 ABCA4P78363 2273 aa10.9□□□□□ -0.66
SF1-201ENST00000227503 NCBP2LA6PVI3 153 aaKnown RBP10.9□□□□□ -0.66
SF1-201ENST00000227503 CNIH1O95406 144 aa10.9□□□□□ -0.66
SF1-201ENST00000227503 IGLC6P0CF74 106 aa10.9□□□□□ -0.66
SF1-201ENST00000227503 COX7A1P24310 79 aa10.9□□□□□ -0.66
SF1-201ENST00000227503 TCF15Q12870 199 aa10.9□□□□□ -0.66
SF1-201ENST00000227503 KLRD1Q13241 179 aa10.9□□□□□ -0.66
SF1-201ENST00000227503 ANAPC13Q9BS18 74 aa10.9□□□□□ -0.66
SF1-201ENST00000227503 LY6LH3BQJ8 138 aa10.9□□□□□ -0.67
SF1-201ENST00000227503 TSPAN13O95857 204 aa10.9□□□□□ -0.67
SF1-201ENST00000227503 PLEKHB2Q96CS7 222 aa10.9□□□□□ -0.67
SF1-201ENST00000227503 ZFHX3Q15911 3703 aa10.9□□□□□ -0.67
SF1-201ENST00000227503 CHD8Q9HCK8 2581 aa10.89□□□□□ -0.67
SF1-201ENST00000227503 MYOZ3Q8TDC0 251 aa10.89□□□□□ -0.67
SF1-201ENST00000227503 NXT2Q9NPJ8 142 aaKnown RBP10.89□□□□□ -0.67
SF1-201ENST00000227503 ERG28Q9UKR5 140 aa10.89□□□□□ -0.67
SF1-201ENST00000227503 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.88□□□□□ -0.67
SF1-201ENST00000227503 PRAC2D3DTV9 90 aa10.88□□□□□ -0.67
SF1-201ENST00000227503 ATP5LO75964 103 aa10.88□□□□□ -0.67
SF1-201ENST00000227503 SRSF1Q07955 248 aaKnown RBP eCLIP10.88□□□□□ -0.674e-12■□□□□ 10.5
SF1-201ENST00000227503 KLHL30-AS1Q8NEE0 82 aa10.88□□□□□ -0.67
SF1-201ENST00000227503 DLX4Q92988 240 aaPredicted RBP10.88□□□□□ -0.67
SF1-201ENST00000227503 VKORC1Q9BQB6 163 aa10.88□□□□□ -0.67
SF1-201ENST00000227503 IGLV2-18A0A075B6J9 118 aa10.87□□□□□ -0.67
SF1-201ENST00000227503 OR11H12B2RN74 326 aa10.87□□□□□ -0.67
SF1-201ENST00000227503 CD3EP07766 207 aa10.87□□□□□ -0.67
SF1-201ENST00000227503 LGALS1P09382 135 aaKnown RBP10.87□□□□□ -0.67
SF1-201ENST00000227503 EMP1P54849 157 aa10.87□□□□□ -0.67
SF1-201ENST00000227503 RNF182Q8N6D2 247 aa10.87□□□□□ -0.67
SF1-201ENST00000227503 OR11H1Q8NG94 326 aa10.87□□□□□ -0.67
SF1-201ENST00000227503 OR11H2Q8NH07 326 aa10.87□□□□□ -0.67
SF1-201ENST00000227503 RNF5Q99942 180 aa10.87□□□□□ -0.67
SF1-201ENST00000227503 A0A087WX48 190 aa10.87□□□□□ -0.67
SF1-201ENST00000227503 MYMXA0A1B0GTQ4 84 aa10.87□□□□□ -0.67
SF1-201ENST00000227503 TRBV20-1A0A075B6N2 111 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms