RNA–Protein interactions for RNA: ENST00000217133.1

TUBB1-201, Transcript of tubulin beta 1 class VI, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBB1, Length 3,496 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB1-201ENST00000217133 IGHV3OR16-8A0A075B7F1 116 aa7.55□□□□□ -1.2
TUBB1-201ENST00000217133 TIMM23O14925 209 aa7.55□□□□□ -1.2
TUBB1-201ENST00000217133 HLA-DMBP28068 263 aa7.55□□□□□ -1.2
TUBB1-201ENST00000217133 RNASE6Q93091 150 aaKnown RBP7.55□□□□□ -1.2
TUBB1-201ENST00000217133 ZMAT4Q9H898 229 aa7.55□□□□□ -1.2
TUBB1-201ENST00000217133 CKS1BP61024 79 aa7.54□□□□□ -1.2
TUBB1-201ENST00000217133 SRSF8Q9BRL6 282 aaKnown RBP7.54□□□□□ -1.2
TUBB1-201ENST00000217133 IGHV3-35A0A0C4DH35 117 aa7.54□□□□□ -1.2
TUBB1-201ENST00000217133 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.54□□□□□ -1.2
TUBB1-201ENST00000217133 SCGB2A1O75556 95 aa7.54□□□□□ -1.2
TUBB1-201ENST00000217133 SRSF1Q07955 248 aaKnown RBP eCLIP7.54□□□□□ -1.2
TUBB1-201ENST00000217133 Q8N8P6 123 aa7.54□□□□□ -1.2
TUBB1-201ENST00000217133 ONECUT1Q9UBC0 465 aa7.54□□□□□ -1.2
TUBB1-201ENST00000217133 KAAG1Q9UBP8 84 aa7.54□□□□□ -1.2
TUBB1-201ENST00000217133 NDUFS8O00217 210 aa7.54□□□□□ -1.2
TUBB1-201ENST00000217133 DTX2Q86UW9 622 aa7.54□□□□□ -1.2
TUBB1-201ENST00000217133 MAPKAPK5-AS1Q8N8E1 139 aa7.54□□□□□ -1.2
TUBB1-201ENST00000217133 C21orf62Q9NYP8 219 aa7.54□□□□□ -1.2
TUBB1-201ENST00000217133 OR11H12B2RN74 326 aa7.53□□□□□ -1.2
TUBB1-201ENST00000217133 NBR2O15453 112 aa7.53□□□□□ -1.2
TUBB1-201ENST00000217133 RAB9AP51151 201 aa7.53□□□□□ -1.2
TUBB1-201ENST00000217133 TAL2Q16559 108 aa7.53□□□□□ -1.2
TUBB1-201ENST00000217133 OR11H1Q8NG94 326 aa7.53□□□□□ -1.2
TUBB1-201ENST00000217133 OR11H2Q8NH07 326 aa7.53□□□□□ -1.2
TUBB1-201ENST00000217133 TNFRSF13BO14836 293 aaPredicted RBP7.53□□□□□ -1.2
TUBB1-201ENST00000217133 THBDP07204 575 aa7.53□□□□□ -1.2
TUBB1-201ENST00000217133 ERCC8Q13216 396 aa7.53□□□□□ -1.2
TUBB1-201ENST00000217133 LAGE3Q14657 143 aa7.53□□□□□ -1.2
TUBB1-201ENST00000217133 RRN3P1Q2M238 152 aa7.53□□□□□ -1.2
TUBB1-201ENST00000217133 CCDC144NLQ6NUI1 221 aa7.53□□□□□ -1.2
TUBB1-201ENST00000217133 LCNL1Q6ZST4 164 aa7.53□□□□□ -1.2
TUBB1-201ENST00000217133 RNF5Q99942 180 aa7.53□□□□□ -1.2
TUBB1-201ENST00000217133 MYO18BQ8IUG5 2567 aa7.53□□□□□ -1.2
TUBB1-201ENST00000217133 CHD6Q8TD26 2715 aa7.53□□□□□ -1.2
TUBB1-201ENST00000217133 ZNF462Q96JM2 2506 aa7.53□□□□□ -1.2
TUBB1-201ENST00000217133 LYNX1G3V0Z9 82 aa7.53□□□□□ -1.2
TUBB1-201ENST00000217133 LYNX1P0DP58 116 aa7.53□□□□□ -1.2
TUBB1-201ENST00000217133 UCNP55089 124 aa7.53□□□□□ -1.2
TUBB1-201ENST00000217133 ATP5G2Q06055 141 aa7.53□□□□□ -1.2
TUBB1-201ENST00000217133 APOMO95445 188 aa7.52□□□□□ -1.21
TUBB1-201ENST00000217133 ZNF502Q8TBZ5 544 aa7.52□□□□□ -1.21
TUBB1-201ENST00000217133 SPATA25Q9BR10 227 aa7.52□□□□□ -1.21
TUBB1-201ENST00000217133 KLK15Q9H2R5 256 aa7.52□□□□□ -1.21
TUBB1-201ENST00000217133 FLNCQ14315 2725 aa7.52□□□□□ -1.21
TUBB1-201ENST00000217133 EFNA4P52798 201 aa7.52□□□□□ -1.21
TUBB1-201ENST00000217133 IGFBPL1Q8WX77 278 aa7.52□□□□□ -1.21
TUBB1-201ENST00000217133 CLUHP3Q96NS8 147 aa7.52□□□□□ -1.21
TUBB1-201ENST00000217133 CYSLTR1Q9Y271 337 aa7.52□□□□□ -1.21
TUBB1-201ENST00000217133 AGRNO00468 2067 aa7.52□□□□□ -1.21
TUBB1-201ENST00000217133 A0A087WX48 190 aa7.51□□□□□ -1.21
TUBB1-201ENST00000217133 TRAV26-2A0A0B4J265 109 aa7.51□□□□□ -1.21
TUBB1-201ENST00000217133 PLNP26678 52 aa7.51□□□□□ -1.21
TUBB1-201ENST00000217133 INSL3P51460 131 aa7.51□□□□□ -1.21
TUBB1-201ENST00000217133 SPANXN1Q5VSR9 72 aa7.51□□□□□ -1.21
TUBB1-201ENST00000217133 MRPL16Q9NX20 251 aaKnown RBP7.51□□□□□ -1.21
TUBB1-201ENST00000217133 PRRG2O14669 202 aa7.51□□□□□ -1.21
TUBB1-201ENST00000217133 HOXA3O43365 443 aaPredicted RBP7.51□□□□□ -1.21
TUBB1-201ENST00000217133 HLA-DRB4P13762 266 aa7.51□□□□□ -1.21
TUBB1-201ENST00000217133 SFTA2Q6UW10 78 aa7.51□□□□□ -1.21
TUBB1-201ENST00000217133 COX8CQ7Z4L0 72 aa7.51□□□□□ -1.21
TUBB1-201ENST00000217133 DYNAPQ8N1N2 210 aa7.51□□□□□ -1.21
TUBB1-201ENST00000217133 HLA-DRB4X5D2U9 266 aa7.51□□□□□ -1.21
TUBB1-201ENST00000217133 LOC107984156A0A0G2JMH3 177 aa7.5□□□□□ -1.21
TUBB1-201ENST00000217133 TRGV3P03979 118 aa7.5□□□□□ -1.21
TUBB1-201ENST00000217133 ARL17AQ8IVW1 177 aa7.5□□□□□ -1.21
TUBB1-201ENST00000217133 FAM57AQ8TBR7 257 aa7.5□□□□□ -1.21
TUBB1-201ENST00000217133 DPM3Q9P2X0 92 aa7.5□□□□□ -1.21
TUBB1-201ENST00000217133 SCGB1D4Q6XE38 83 aa7.5□□□□□ -1.21
TUBB1-201ENST00000217133 IL17RELQ6ZVW7 336 aa7.5□□□□□ -1.21
TUBB1-201ENST00000217133 WFDC12Q8WWY7 111 aa7.5□□□□□ -1.21
TUBB1-201ENST00000217133 CFHR4Q92496 578 aa7.5□□□□□ -1.21
TUBB1-201ENST00000217133 FANCD2OSQ96PS1 177 aa7.5□□□□□ -1.21
TUBB1-201ENST00000217133 PGPEP1Q9NXJ5 209 aa7.5□□□□□ -1.21
TUBB1-201ENST00000217133 H7C1H1 209 aa7.5□□□□□ -1.21
TUBB1-201ENST00000217133 PRB1P04280 392 aa7.5□□□□□ -1.21
TUBB1-201ENST00000217133 C20orf78Q9BR46 151 aa7.5□□□□□ -1.21
TUBB1-201ENST00000217133 CNFNQ9BYD5 112 aa7.5□□□□□ -1.21
TUBB1-201ENST00000217133 IGLV11-55A0A075B6I3 123 aa7.49□□□□□ -1.21
TUBB1-201ENST00000217133 PRAC2D3DTV9 90 aa7.49□□□□□ -1.21
TUBB1-201ENST00000217133 SRSF9Q13242 221 aaKnown RBP eCLIP7.49□□□□□ -1.21
TUBB1-201ENST00000217133 RNF182Q8N6D2 247 aa7.49□□□□□ -1.21
TUBB1-201ENST00000217133 SYT8Q8NBV8 401 aa7.49□□□□□ -1.21
TUBB1-201ENST00000217133 MRAP2Q96G30 205 aa7.49□□□□□ -1.21
TUBB1-201ENST00000217133 IGHV3OR16-13A0A075B7E8 117 aa7.49□□□□□ -1.21
TUBB1-201ENST00000217133 IGHV3-74A0A0B4J1X5 117 aa7.49□□□□□ -1.21
TUBB1-201ENST00000217133 A0A0G2JNJ9 132 aa7.49□□□□□ -1.21
TUBB1-201ENST00000217133 LINC01546A6NGU7 62 aa7.49□□□□□ -1.21
TUBB1-201ENST00000217133 C5orf64Q2M2E5 130 aa7.49□□□□□ -1.21
TUBB1-201ENST00000217133 SCGB3A1Q96QR1 104 aa7.49□□□□□ -1.21
TUBB1-201ENST00000217133 PRORYQ9H606 182 aa7.49□□□□□ -1.21
TUBB1-201ENST00000217133 HIF1ANQ9NWT6 349 aa7.49□□□□□ -1.21
TUBB1-201ENST00000217133 Q9UFV3 132 aa7.49□□□□□ -1.21
TUBB1-201ENST00000217133 IGHV3-66A0A0C4DH42 116 aa7.48□□□□□ -1.21
TUBB1-201ENST00000217133 MYMXA0A1B0GTQ4 84 aa7.48□□□□□ -1.21
TUBB1-201ENST00000217133 TMEM238LA0A1B0GVL6 79 aa7.48□□□□□ -1.21
TUBB1-201ENST00000217133 A6NJY4 79 aa7.48□□□□□ -1.21
TUBB1-201ENST00000217133 F8VRH5 84 aa7.48□□□□□ -1.21
TUBB1-201ENST00000217133 SRSF2Q01130 221 aaKnown RBP7.48□□□□□ -1.21
TUBB1-201ENST00000217133 ZNF418Q8TF45 676 aaPredicted RBP7.48□□□□□ -1.21
TUBB1-201ENST00000217133 SMAD5-AS1Q9Y6J3 95 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms