RNA–Protein interactions for RNA: ENSMUST00000201711.3

Pdgfra-205, Transcript of Platelet-derived growth factor receptor alpha, mousemouse

TSL 1 (best) BASIC

Gene Pdgfra, Length 4,088 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdgfra-205ENSMUST00000201711 Cd5lQ9QWK4 352 aa11.09□□□□□ -0.63
Pdgfra-205ENSMUST00000201711 Lrrc37aB1AWG4 3215 aa11.08□□□□□ -0.63
Pdgfra-205ENSMUST00000201711 Wdr90Q6ZPG2 1874 aa11.08□□□□□ -0.64
Pdgfra-205ENSMUST00000201711 Gm10778A0A087WNP5 499 aa11.08□□□□□ -0.64
Pdgfra-205ENSMUST00000201711 Gm12830F6XVH0 157 aa11.08□□□□□ -0.64
Pdgfra-205ENSMUST00000201711 RhobP62746 196 aa11.08□□□□□ -0.64
Pdgfra-205ENSMUST00000201711 Shisa6Q3UH99 525 aa11.08□□□□□ -0.64
Pdgfra-205ENSMUST00000201711 Rhbdd1Q8BHC7 315 aa11.08□□□□□ -0.64
Pdgfra-205ENSMUST00000201711 Olfr355Q8VFP6 310 aa11.08□□□□□ -0.64
Pdgfra-205ENSMUST00000201711 Sfxn4Q925N1 313 aa11.08□□□□□ -0.64
Pdgfra-205ENSMUST00000201711 Mrps36Q9CQX8 102 aa11.08□□□□□ -0.64
Pdgfra-205ENSMUST00000201711 Ap5s1Q9D742 170 aa11.08□□□□□ -0.64
Pdgfra-205ENSMUST00000201711 1110002E22RikE0CYV9 1786 aa11.08□□□□□ -0.64
Pdgfra-205ENSMUST00000201711 Igkv13-84A0A140T8N3 115 aa11.08□□□□□ -0.64
Pdgfra-205ENSMUST00000201711 Fam3dP97805 223 aa11.08□□□□□ -0.64
Pdgfra-205ENSMUST00000201711 Olfr1370Q8VFG4 316 aa11.08□□□□□ -0.64
Pdgfra-205ENSMUST00000201711 Scrt1Q99M85 348 aa11.08□□□□□ -0.64
Pdgfra-205ENSMUST00000201711 3100002H09RikQ9CXW6 140 aa11.08□□□□□ -0.64
Pdgfra-205ENSMUST00000201711 Olfr1098A2AVB0 315 aa11.08□□□□□ -0.64
Pdgfra-205ENSMUST00000201711 Gata2O09100 480 aa11.08□□□□□ -0.64
Pdgfra-205ENSMUST00000201711 BokO35425 213 aa11.08□□□□□ -0.64
Pdgfra-205ENSMUST00000201711 Fgfbp1O70514 251 aa11.08□□□□□ -0.64
Pdgfra-205ENSMUST00000201711 Ifna6P07350 189 aa11.08□□□□□ -0.64
Pdgfra-205ENSMUST00000201711 Ccl1P10146 92 aa11.08□□□□□ -0.64
Pdgfra-205ENSMUST00000201711 Col8a2P25318 699 aa11.08□□□□□ -0.64
Pdgfra-205ENSMUST00000201711 Cox7a2P48771 83 aa11.08□□□□□ -0.64
Pdgfra-205ENSMUST00000201711 Sumo1P63166 101 aaKnown RBP11.08□□□□□ -0.64
Pdgfra-205ENSMUST00000201711 Smim7Q5RKS2 75 aa11.08□□□□□ -0.64
Pdgfra-205ENSMUST00000201711 Spred3Q6P6N5 408 aa11.08□□□□□ -0.64
Pdgfra-205ENSMUST00000201711 Ighv7-3A0A075B5R2 120 aa11.07□□□□□ -0.64
Pdgfra-205ENSMUST00000201711 Ighv6-3A0A075B5T2 118 aa11.07□□□□□ -0.64
Pdgfra-205ENSMUST00000201711 Slc35d1A2AKQ0 355 aa11.07□□□□□ -0.64
Pdgfra-205ENSMUST00000201711 Gm9964E9Q9S5 144 aa11.07□□□□□ -0.64
Pdgfra-205ENSMUST00000201711 Ccl2P10148 148 aa11.07□□□□□ -0.64
Pdgfra-205ENSMUST00000201711 Gnb4P29387 340 aa11.07□□□□□ -0.64
Pdgfra-205ENSMUST00000201711 Rplp1P47955 114 aa11.07□□□□□ -0.64
Pdgfra-205ENSMUST00000201711 Gnb2P62880 340 aa11.07□□□□□ -0.64
Pdgfra-205ENSMUST00000201711 Ube2l3P68037 154 aaKnown RBP11.07□□□□□ -0.64
Pdgfra-205ENSMUST00000201711 Olfr1472Q7TQQ9 314 aa11.07□□□□□ -0.64
Pdgfra-205ENSMUST00000201711 Olfr1030Q8VFL5 318 aa11.07□□□□□ -0.64
Pdgfra-205ENSMUST00000201711 Olfr822Q8VFU1 312 aa11.07□□□□□ -0.64
Pdgfra-205ENSMUST00000201711 Tmem100Q9CQG9 134 aa11.07□□□□□ -0.64
Pdgfra-205ENSMUST00000201711 Fxyd4Q9D2W0 88 aa11.07□□□□□ -0.64
Pdgfra-205ENSMUST00000201711 Ighv1-67A0A0G2JFN9 117 aa11.07□□□□□ -0.64
Pdgfra-205ENSMUST00000201711 Nat8f7E0CYR6 227 aa11.07□□□□□ -0.64
Pdgfra-205ENSMUST00000201711 AgaQ64191 346 aa11.07□□□□□ -0.64
Pdgfra-205ENSMUST00000201711 Irf2bp2E9Q1P8 570 aa11.07□□□□□ -0.64
Pdgfra-205ENSMUST00000201711 Olfr556E9Q549 324 aa11.07□□□□□ -0.64
Pdgfra-205ENSMUST00000201711 Olfr1220F7BL62 311 aa11.07□□□□□ -0.64
Pdgfra-205ENSMUST00000201711 Pde6dO55057 150 aa11.07□□□□□ -0.64
Pdgfra-205ENSMUST00000201711 Zfp27P10077 819 aa11.07□□□□□ -0.64
Pdgfra-205ENSMUST00000201711 Repin1Q5U4E2 545 aa11.07□□□□□ -0.64
Pdgfra-205ENSMUST00000201711 MiaQ61865 130 aa11.07□□□□□ -0.64
Pdgfra-205ENSMUST00000201711 Gm10334Q792Y8 246 aa11.07□□□□□ -0.64
Pdgfra-205ENSMUST00000201711 Megf9Q8BH27 600 aa11.07□□□□□ -0.64
Pdgfra-205ENSMUST00000201711 Cdcp2Q8BQH6 427 aa11.07□□□□□ -0.64
Pdgfra-205ENSMUST00000201711 Slc25a16Q8C0K5 332 aa11.07□□□□□ -0.64
Pdgfra-205ENSMUST00000201711 Rnf126Q91YL2 313 aa11.07□□□□□ -0.64
Pdgfra-205ENSMUST00000201711 Anapc16Q9CPV2 110 aa11.07□□□□□ -0.64
Pdgfra-205ENSMUST00000201711 PifoQ9D9W1 207 aa11.07□□□□□ -0.64
Pdgfra-205ENSMUST00000201711 Hoxb2P0C1T1 354 aa11.06□□□□□ -0.64
Pdgfra-205ENSMUST00000201711 CtsbP10605 339 aa11.06□□□□□ -0.64
Pdgfra-205ENSMUST00000201711 ApcsP12246 224 aa11.06□□□□□ -0.64
Pdgfra-205ENSMUST00000201711 Prrx1P63013 245 aa11.06□□□□□ -0.64
Pdgfra-205ENSMUST00000201711 Tet1Q3URK3 2007 aaKnown RBP11.06□□□□□ -0.64
Pdgfra-205ENSMUST00000201711 AdtrpQ8C138 230 aa11.06□□□□□ -0.64
Pdgfra-205ENSMUST00000201711 Mrpl27Q99N92 148 aa11.06□□□□□ -0.64
Pdgfra-205ENSMUST00000201711 Nicn1Q9CQM0 213 aa11.06□□□□□ -0.64
Pdgfra-205ENSMUST00000201711 FibinQ9CQS3 217 aa11.06□□□□□ -0.64
Pdgfra-205ENSMUST00000201711 Tppp3Q9CRB6 176 aaKnown RBP11.06□□□□□ -0.64
Pdgfra-205ENSMUST00000201711 Zfp980A2A9J5 645 aa11.06□□□□□ -0.64
Pdgfra-205ENSMUST00000201711 Olfr143P34985 313 aa11.06□□□□□ -0.64
Pdgfra-205ENSMUST00000201711 CortP56469 109 aa11.06□□□□□ -0.64
Pdgfra-205ENSMUST00000201711 Cited1P97769 203 aa11.06□□□□□ -0.64
Pdgfra-205ENSMUST00000201711 Tmem204Q7TQI0 226 aa11.06□□□□□ -0.64
Pdgfra-205ENSMUST00000201711 P2ry6Q9ERK9 328 aa11.06□□□□□ -0.64
Pdgfra-205ENSMUST00000201711 Ncoa6Q9JL19 2067 aa11.06□□□□□ -0.64
Pdgfra-205ENSMUST00000201711 Trav17A0A075B655 113 aa11.06□□□□□ -0.64
Pdgfra-205ENSMUST00000201711 AU041133A0A0J9YVH3 498 aa11.06□□□□□ -0.64
Pdgfra-205ENSMUST00000201711 Igkv14-111A0A140T8P9 117 aa11.06□□□□□ -0.64
Pdgfra-205ENSMUST00000201711 Zfp979A2A799 407 aa11.06□□□□□ -0.64
Pdgfra-205ENSMUST00000201711 MsmpB1AWI6 139 aa11.06□□□□□ -0.64
Pdgfra-205ENSMUST00000201711 Ren2P00796 401 aa11.06□□□□□ -0.64
Pdgfra-205ENSMUST00000201711 Spcs3Q6ZWQ7 180 aa11.06□□□□□ -0.64
Pdgfra-205ENSMUST00000201711 9930022D16RikQ8BG27 128 aa11.06□□□□□ -0.64
Pdgfra-205ENSMUST00000201711 Lurap1Q9D6I9 239 aa11.06□□□□□ -0.64
Pdgfra-205ENSMUST00000201711 Rab24P35290 203 aa11.05□□□□□ -0.64
Pdgfra-205ENSMUST00000201711 Olfr1434Q7TQR9 312 aa11.05□□□□□ -0.64
Pdgfra-205ENSMUST00000201711 Cyb5r3Q9DCN2 301 aaKnown RBP11.05□□□□□ -0.64
Pdgfra-205ENSMUST00000201711 Igkv14-100A0A0G2JG36 117 aa11.05□□□□□ -0.64
Pdgfra-205ENSMUST00000201711 Ren1P06281 402 aa11.05□□□□□ -0.64
Pdgfra-205ENSMUST00000201711 ApohQ01339 345 aa11.05□□□□□ -0.64
Pdgfra-205ENSMUST00000201711 Rtl6Q505G4 243 aa11.05□□□□□ -0.64
Pdgfra-205ENSMUST00000201711 Olfr346Q8VGJ7 309 aa11.05□□□□□ -0.64
Pdgfra-205ENSMUST00000201711 Mgst1Q91VS7 155 aa11.05□□□□□ -0.64
Pdgfra-205ENSMUST00000201711 Vma21-psA0A140T8R2 101 aa11.05□□□□□ -0.64
Pdgfra-205ENSMUST00000201711 Gm4744D3Z3S5 154 aa11.05□□□□□ -0.64
Pdgfra-205ENSMUST00000201711 Psg27Q497W2 474 aa11.05□□□□□ -0.64
Pdgfra-205ENSMUST00000201711 Rab29Q91YQ1 204 aa11.05□□□□□ -0.64
Pdgfra-205ENSMUST00000201711 Herpud1Q9JJK5 391 aa11.05□□□□□ -0.64
Retrieved 100 of 22,080 RNA–protein pairs in 45.8 ms