RNA–Protein interactions for RNA: ENSMUST00000196220.4

Pdlim5-208, Transcript of PDZ and LIM domain protein 5, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Pdlim5, Length 1,725 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim5-208ENSMUST00000196220 Vstm5Q9D806 199 aa10.91□□□□□ -0.66
Pdlim5-208ENSMUST00000196220 Lsm4Q9QXA5 137 aaKnown RBP10.91□□□□□ -0.66
Pdlim5-208ENSMUST00000196220 Dopey1Q8BL99 2399 aa10.9□□□□□ -0.66
Pdlim5-208ENSMUST00000196220 Ighv14-3A0A075B5R9 117 aa10.9□□□□□ -0.66
Pdlim5-208ENSMUST00000196220 Gm21244J3QK38 227 aa10.9□□□□□ -0.66
Pdlim5-208ENSMUST00000196220 P18530 117 aa10.9□□□□□ -0.66
Pdlim5-208ENSMUST00000196220 Col8a2P25318 699 aa10.9□□□□□ -0.66
Pdlim5-208ENSMUST00000196220 Dvl1P51141 695 aa10.9□□□□□ -0.66
Pdlim5-208ENSMUST00000196220 Ctdsp1P58466 261 aa10.9□□□□□ -0.66
Pdlim5-208ENSMUST00000196220 Zfp970Q08BU3 522 aa10.9□□□□□ -0.66
Pdlim5-208ENSMUST00000196220 Dnd1Q6VY05 352 aa10.9□□□□□ -0.66
Pdlim5-208ENSMUST00000196220 Olfr1178Q7TR20 323 aa10.9□□□□□ -0.66
Pdlim5-208ENSMUST00000196220 Olfr399Q7TRX3 311 aa10.9□□□□□ -0.66
Pdlim5-208ENSMUST00000196220 BsxQ810B3 232 aa10.9□□□□□ -0.66
Pdlim5-208ENSMUST00000196220 Zfp874aQ8BX23 447 aa10.9□□□□□ -0.66
Pdlim5-208ENSMUST00000196220 Zfp459Q8BZ17 267 aa10.9□□□□□ -0.66
Pdlim5-208ENSMUST00000196220 Gm4894Q8CA09 118 aa10.9□□□□□ -0.66
Pdlim5-208ENSMUST00000196220 Klf17Q8CFA7 341 aa10.9□□□□□ -0.66
Pdlim5-208ENSMUST00000196220 Cdc34Q8CFI2 235 aa10.9□□□□□ -0.66
Pdlim5-208ENSMUST00000196220 Olfr113Q8VEU4 312 aa10.9□□□□□ -0.66
Pdlim5-208ENSMUST00000196220 Olfr786Q8VFH8 312 aa10.9□□□□□ -0.66
Pdlim5-208ENSMUST00000196220 4933400A11RikQ9CR52 288 aa10.9□□□□□ -0.66
Pdlim5-208ENSMUST00000196220 Sgms2Q9D4B1 365 aa10.9□□□□□ -0.66
Pdlim5-208ENSMUST00000196220 Tspan4Q9DCK3 238 aa10.9□□□□□ -0.66
Pdlim5-208ENSMUST00000196220 Trav7n-5A0A075B604 112 aa10.89□□□□□ -0.67
Pdlim5-208ENSMUST00000196220 Olfr1458A0A1L1SSD5 307 aa10.89□□□□□ -0.67
Pdlim5-208ENSMUST00000196220 Zfp971A2BFG8 470 aa10.89□□□□□ -0.67
Pdlim5-208ENSMUST00000196220 Zcchc24B2RVL6 241 aaKnown RBP10.89□□□□□ -0.67
Pdlim5-208ENSMUST00000196220 Gm14288E9Q9W0 88 aa10.89□□□□□ -0.67
Pdlim5-208ENSMUST00000196220 Cst7O89098 144 aa10.89□□□□□ -0.67
Pdlim5-208ENSMUST00000196220 IappP12968 93 aa10.89□□□□□ -0.67
Pdlim5-208ENSMUST00000196220 Dlx6P70397 175 aa10.89□□□□□ -0.67
Pdlim5-208ENSMUST00000196220 Rnase11Q5GAM9 192 aa10.89□□□□□ -0.67
Pdlim5-208ENSMUST00000196220 TpppQ7TQD2 218 aaKnown RBP10.89□□□□□ -0.67
Pdlim5-208ENSMUST00000196220 Olfr1382Q7TQT3 311 aa10.89□□□□□ -0.67
Pdlim5-208ENSMUST00000196220 Olfr1295Q8VF48 312 aa10.89□□□□□ -0.67
Pdlim5-208ENSMUST00000196220 Olfr1462Q8VFW3 307 aa10.89□□□□□ -0.67
Pdlim5-208ENSMUST00000196220 Cisd1Q91WS0 108 aaKnown RBP10.89□□□□□ -0.67
Pdlim5-208ENSMUST00000196220 Mrpl42Q9CPV3 142 aa10.89□□□□□ -0.67
Pdlim5-208ENSMUST00000196220 Ms4a4cQ9D3F6 226 aa10.89□□□□□ -0.67
Pdlim5-208ENSMUST00000196220 Mlst8Q9DCJ1 326 aa10.89□□□□□ -0.67
Pdlim5-208ENSMUST00000196220 Dnajb12Q9QYI4 376 aaKnown RBP10.89□□□□□ -0.67
Pdlim5-208ENSMUST00000196220 Tln1P26039 2541 aaKnown RBP10.89□□□□□ -0.67
Pdlim5-208ENSMUST00000196220 TncQ80YX1 2110 aa10.89□□□□□ -0.67
Pdlim5-208ENSMUST00000196220 Ighv1-26A0A075B5V0 117 aa10.89□□□□□ -0.67
Pdlim5-208ENSMUST00000196220 Ighv8-9A0A0G2JET1 119 aa10.89□□□□□ -0.67
Pdlim5-208ENSMUST00000196220 Gm44596A0A0N4SVA0 210 aa10.89□□□□□ -0.67
Pdlim5-208ENSMUST00000196220 Olfr1124A2AT86 318 aa10.89□□□□□ -0.67
Pdlim5-208ENSMUST00000196220 Zfp972A2AW65 139 aa10.89□□□□□ -0.67
Pdlim5-208ENSMUST00000196220 Gm20532G3UXR8 106 aa10.89□□□□□ -0.67
Pdlim5-208ENSMUST00000196220 Gm21732J3QM79 361 aa10.89□□□□□ -0.67
Pdlim5-208ENSMUST00000196220 Gm21921J3QNB5 361 aa10.89□□□□□ -0.67
Pdlim5-208ENSMUST00000196220 GzmfP08883 248 aa10.89□□□□□ -0.67
Pdlim5-208ENSMUST00000196220 Dnajc30P59041 219 aa10.89□□□□□ -0.67
Pdlim5-208ENSMUST00000196220 Nkx3-1P97436 237 aa10.89□□□□□ -0.67
Pdlim5-208ENSMUST00000196220 MyocosQ3UWS6 143 aa10.89□□□□□ -0.67
Pdlim5-208ENSMUST00000196220 Dtx1Q61010 627 aa10.89□□□□□ -0.67
Pdlim5-208ENSMUST00000196220 Tgfbr1Q64729 503 aa10.89□□□□□ -0.67
Pdlim5-208ENSMUST00000196220 Olfr654Q8VF27 341 aa10.89□□□□□ -0.67
Pdlim5-208ENSMUST00000196220 Olfr513Q8VFZ3 309 aa10.89□□□□□ -0.67
Pdlim5-208ENSMUST00000196220 Actl6bQ99MR0 426 aa10.89□□□□□ -0.67
Pdlim5-208ENSMUST00000196220 Eaf1Q9D4C5 268 aa10.89□□□□□ -0.67
Pdlim5-208ENSMUST00000196220 2200002J24RikQ9D807 110 aa10.89□□□□□ -0.67
Pdlim5-208ENSMUST00000196220 RetnlaQ9EP95 111 aa10.89□□□□□ -0.67
Pdlim5-208ENSMUST00000196220 Pxmp4Q9JJW0 212 aa10.89□□□□□ -0.67
Pdlim5-208ENSMUST00000196220 Trex2Q9R1A9 236 aa10.89□□□□□ -0.67
Pdlim5-208ENSMUST00000196220 Ccpg1osV9GXK1 122 aa10.89□□□□□ -0.67
Pdlim5-208ENSMUST00000196220 CenpeQ6RT24 2474 aaKnown RBP10.89□□□□□ -0.67
Pdlim5-208ENSMUST00000196220 CadB2RQC6 2225 aa10.88□□□□□ -0.67
Pdlim5-208ENSMUST00000196220 Gm28778A0A087WSK7 233 aa10.88□□□□□ -0.67
Pdlim5-208ENSMUST00000196220 Fcrl6A1YIY0 268 aa10.88□□□□□ -0.67
Pdlim5-208ENSMUST00000196220 Gm15127B1AVZ5 449 aa10.88□□□□□ -0.67
Pdlim5-208ENSMUST00000196220 Gm15091B1AZM2 449 aa10.88□□□□□ -0.67
Pdlim5-208ENSMUST00000196220 PomcP01193 235 aa10.88□□□□□ -0.67
Pdlim5-208ENSMUST00000196220 P01659 112 aa10.88□□□□□ -0.67
Pdlim5-208ENSMUST00000196220 Ifna5P07349 189 aa10.88□□□□□ -0.67
Pdlim5-208ENSMUST00000196220 ApcsP12246 224 aa10.88□□□□□ -0.67
Pdlim5-208ENSMUST00000196220 Icam2P35330 277 aa10.88□□□□□ -0.67
Pdlim5-208ENSMUST00000196220 Fxyd3Q61835 88 aa10.88□□□□□ -0.67
Pdlim5-208ENSMUST00000196220 Slc25a29Q8BL03 306 aa10.88□□□□□ -0.67
Pdlim5-208ENSMUST00000196220 Pcgf1Q8R023 259 aaKnown RBP10.88□□□□□ -0.67
Pdlim5-208ENSMUST00000196220 OtosQ8R448 89 aa10.88□□□□□ -0.67
Pdlim5-208ENSMUST00000196220 Olfr1412Q8VET3 321 aa10.88□□□□□ -0.67
Pdlim5-208ENSMUST00000196220 Olfr1183Q8VFF8 303 aa10.88□□□□□ -0.67
Pdlim5-208ENSMUST00000196220 Mrpl41Q9CQN7 135 aaKnown RBP10.88□□□□□ -0.67
Pdlim5-208ENSMUST00000196220 Lypd8Q9D7S0 255 aa10.88□□□□□ -0.67
Pdlim5-208ENSMUST00000196220 PifoQ9D9W1 207 aa10.88□□□□□ -0.67
Pdlim5-208ENSMUST00000196220 Cmtm2bQ9DAC0 210 aa10.88□□□□□ -0.67
Pdlim5-208ENSMUST00000196220 Mettl9Q9EPL4 318 aa10.88□□□□□ -0.67
Pdlim5-208ENSMUST00000196220 Ms4a4bQ9ES61 226 aa10.88□□□□□ -0.67
Pdlim5-208ENSMUST00000196220 Gpr34Q9R1K6 375 aa10.88□□□□□ -0.67
Pdlim5-208ENSMUST00000196220 Vsig2Q9Z109 328 aa10.88□□□□□ -0.67
Pdlim5-208ENSMUST00000196220 CrebbpP45481 2441 aa10.88□□□□□ -0.67
Pdlim5-208ENSMUST00000196220 Gvin1Q80SU7 2427 aa10.87□□□□□ -0.67
Pdlim5-208ENSMUST00000196220 Ighv7-2A0A0A6YX91 119 aa10.87□□□□□ -0.67
Pdlim5-208ENSMUST00000196220 Gm14412A2ARR7 526 aa10.87□□□□□ -0.67
Pdlim5-208ENSMUST00000196220 Tnfsf12O54907 249 aa10.87□□□□□ -0.67
Pdlim5-208ENSMUST00000196220 Rps16P14131 146 aaKnown RBP10.87□□□□□ -0.67
Pdlim5-208ENSMUST00000196220 ShbgP97497 403 aa10.87□□□□□ -0.67
Pdlim5-208ENSMUST00000196220 CenptQ3TJM4 515 aa10.87□□□□□ -0.67
Retrieved 100 of 22,080 RNA–protein pairs in 69.7 ms