RNA–Protein interactions for RNA: ENSMUST00000087883.12

Col3a1-201, Transcript of Collagen alpha-1(III) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col3a1, Length 5,564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col3a1-201ENSMUST00000087883 Eda2rQ8BX35 297 aa11.93□□□□□ -0.5
Col3a1-201ENSMUST00000087883 Trpt1Q8K3A2 249 aa11.93□□□□□ -0.5
Col3a1-201ENSMUST00000087883 Errfi1Q99JZ7 461 aa11.93□□□□□ -0.5
Col3a1-201ENSMUST00000087883 Mrpl23O35972 146 aaKnown RBP11.93□□□□□ -0.5
Col3a1-201ENSMUST00000087883 CirbpP60824 172 aaKnown RBP11.93□□□□□ -0.5
Col3a1-201ENSMUST00000087883 Fam214bQ8BR27 538 aa11.93□□□□□ -0.5
Col3a1-201ENSMUST00000087883 Bricd5Q8BV89 174 aa11.93□□□□□ -0.5
Col3a1-201ENSMUST00000087883 Chrdl2Q8VEA6 426 aa11.93□□□□□ -0.5
Col3a1-201ENSMUST00000087883 Fam241aQ9CZL2 131 aa11.93□□□□□ -0.5
Col3a1-201ENSMUST00000087883 Trav12-1A0N8R1 115 aa11.93□□□□□ -0.5
Col3a1-201ENSMUST00000087883 P01637 128 aa11.93□□□□□ -0.5
Col3a1-201ENSMUST00000087883 Psg27Q497W2 474 aa11.93□□□□□ -0.5
Col3a1-201ENSMUST00000087883 Defa23Q5G866 93 aa11.93□□□□□ -0.5
Col3a1-201ENSMUST00000087883 4930544G11RikQ9CR99 193 aa11.93□□□□□ -0.5
Col3a1-201ENSMUST00000087883 Necap2Q9D1J1 266 aa11.93□□□□□ -0.5
Col3a1-201ENSMUST00000087883 Lbhd2G3UW55 114 aa11.93□□□□□ -0.5
Col3a1-201ENSMUST00000087883 D430019H16RikJ3QPM6 83 aa11.93□□□□□ -0.5
Col3a1-201ENSMUST00000087883 HhexP43120 271 aa11.93□□□□□ -0.5
Col3a1-201ENSMUST00000087883 Dnase2P56542 353 aa11.93□□□□□ -0.5
Col3a1-201ENSMUST00000087883 Rnase9P60154 184 aa11.93□□□□□ -0.5
Col3a1-201ENSMUST00000087883 Immp2lQ8BPT6 175 aa11.93□□□□□ -0.5
Col3a1-201ENSMUST00000087883 Tmem189Q99LQ7 271 aa11.93□□□□□ -0.5
Col3a1-201ENSMUST00000087883 Tmem54Q9D7S1 219 aa11.93□□□□□ -0.5
Col3a1-201ENSMUST00000087883 Erg28Q9ERY9 140 aa11.93□□□□□ -0.5
Col3a1-201ENSMUST00000087883 TriobpQ99KW3 2014 aa11.92□□□□□ -0.5
Col3a1-201ENSMUST00000087883 H2-Ab1P01921 265 aa11.92□□□□□ -0.5
Col3a1-201ENSMUST00000087883 Bsph1Q3UW26 133 aa11.92□□□□□ -0.5
Col3a1-201ENSMUST00000087883 Vdac1Q60932 296 aaKnown RBP11.92□□□□□ -0.5
Col3a1-201ENSMUST00000087883 Mex3bQ69Z36 601 aaKnown RBP11.92□□□□□ -0.5
Col3a1-201ENSMUST00000087883 GfralQ6SJE0 393 aa11.92□□□□□ -0.5
Col3a1-201ENSMUST00000087883 Olfr976Q8VF15 326 aa11.92□□□□□ -0.5
Col3a1-201ENSMUST00000087883 Gpr132Q9Z282 382 aa11.92□□□□□ -0.5
Col3a1-201ENSMUST00000087883 Gm28372A0A087WNV0 220 aa11.92□□□□□ -0.5
Col3a1-201ENSMUST00000087883 Tcrg-V4A0A0B4J1J8 138 aa11.92□□□□□ -0.5
Col3a1-201ENSMUST00000087883 D930048N14RikA2AA67 225 aa11.92□□□□□ -0.5
Col3a1-201ENSMUST00000087883 Ren2P00796 401 aa11.92□□□□□ -0.5
Col3a1-201ENSMUST00000087883 Tctn3Q8R2Q6 595 aa11.92□□□□□ -0.5
Col3a1-201ENSMUST00000087883 Prss30Q9QYZ9 310 aa11.92□□□□□ -0.5
Col3a1-201ENSMUST00000087883 Igkv10-95A0A0G2JFY3 115 aa11.92□□□□□ -0.5
Col3a1-201ENSMUST00000087883 Gm2381G3UY53 305 aa11.92□□□□□ -0.5
Col3a1-201ENSMUST00000087883 TgfaP48030 159 aa11.92□□□□□ -0.5
Col3a1-201ENSMUST00000087883 Olfr139Q60891 315 aa11.92□□□□□ -0.5
Col3a1-201ENSMUST00000087883 Nabp1Q8BGW5 198 aa11.92□□□□□ -0.5
Col3a1-201ENSMUST00000087883 Hyls1Q9CXX0 307 aa11.92□□□□□ -0.5
Col3a1-201ENSMUST00000087883 Tcrg-C2A0A075B5Z2 167 aa11.91□□□□□ -0.5
Col3a1-201ENSMUST00000087883 P01853 167 aa11.91□□□□□ -0.5
Col3a1-201ENSMUST00000087883 Cops9Q3U898 57 aa11.91□□□□□ -0.5
Col3a1-201ENSMUST00000087883 SmpxQ9DC77 85 aa11.91□□□□□ -0.5
Col3a1-201ENSMUST00000087883 Vsig8Q6P3A4 417 aa11.91□□□□□ -0.5
Col3a1-201ENSMUST00000087883 Klhdc1Q80YG3 406 aa11.91□□□□□ -0.5
Col3a1-201ENSMUST00000087883 Trav13n-4A0A0G2JG01 110 aa11.91□□□□□ -0.5
Col3a1-201ENSMUST00000087883 Prr19B2RW88 366 aa11.91□□□□□ -0.5
Col3a1-201ENSMUST00000087883 Zfp983E9PUT0 460 aa11.91□□□□□ -0.5
Col3a1-201ENSMUST00000087883 AmtnQ9D3J8 213 aa11.91□□□□□ -0.5
Col3a1-201ENSMUST00000087883 Sdf2l1Q9ESP1 221 aa11.91□□□□□ -0.5
Col3a1-201ENSMUST00000087883 Ramp3Q9WUP1 147 aa11.91□□□□□ -0.5
Col3a1-201ENSMUST00000087883 Trav18A0A075B656 109 aa11.91□□□□□ -0.5
Col3a1-201ENSMUST00000087883 Csrp3P50462 194 aa11.91□□□□□ -0.5
Col3a1-201ENSMUST00000087883 Dcaf12l1Q8CBW4 501 aa11.91□□□□□ -0.5
Col3a1-201ENSMUST00000087883 Anapc13Q8R034 74 aa11.91□□□□□ -0.5
Col3a1-201ENSMUST00000087883 CroccQ8CJ40 2009 aa11.9□□□□□ -0.5
Col3a1-201ENSMUST00000087883 P01654 111 aa11.9□□□□□ -0.5
Col3a1-201ENSMUST00000087883 P01656 111 aa11.9□□□□□ -0.5
Col3a1-201ENSMUST00000087883 P03977 111 aa11.9□□□□□ -0.5
Col3a1-201ENSMUST00000087883 Gsx1P31315 261 aa11.9□□□□□ -0.5
Col3a1-201ENSMUST00000087883 Il12rb1Q60837 738 aa11.9□□□□□ -0.5
Col3a1-201ENSMUST00000087883 Arl6ip6Q8BH07 226 aa11.9□□□□□ -0.5
Col3a1-201ENSMUST00000087883 Olfr195Q8VGQ6 308 aa11.9□□□□□ -0.5
Col3a1-201ENSMUST00000087883 Ndufa2Q9CQ75 99 aa11.9□□□□□ -0.5
Col3a1-201ENSMUST00000087883 Cnn3Q9DAW9 330 aaKnown RBP11.9□□□□□ -0.5
Col3a1-201ENSMUST00000087883 Nup205A0A0J9YUD5 2061 aaKnown RBP11.9□□□□□ -0.5
Col3a1-201ENSMUST00000087883 1700025B11RikA0A087WNZ6 93 aa11.9□□□□□ -0.5
Col3a1-201ENSMUST00000087883 Igkv15-103A0A140T8P3 115 aa11.9□□□□□ -0.5
Col3a1-201ENSMUST00000087883 Cd96Q3U0X8 602 aa11.9□□□□□ -0.5
Col3a1-201ENSMUST00000087883 Mob4Q6PEB6 225 aa11.9□□□□□ -0.5
Col3a1-201ENSMUST00000087883 Olfr1350Q8VF34 308 aa11.9□□□□□ -0.5
Col3a1-201ENSMUST00000087883 Olfr33Q8VGX7 318 aa11.9□□□□□ -0.5
Col3a1-201ENSMUST00000087883 Spcs1Q9D958 161 aa11.9□□□□□ -0.5
Col3a1-201ENSMUST00000087883 Mixl1Q9WUI0 231 aa11.9□□□□□ -0.5
Col3a1-201ENSMUST00000087883 P01759 136 aa11.9□□□□□ -0.5
Col3a1-201ENSMUST00000087883 C1ql2Q8CFR0 287 aa11.9□□□□□ -0.5
Col3a1-201ENSMUST00000087883 Ovol2Q8CIV7 274 aa11.9□□□□□ -0.5
Col3a1-201ENSMUST00000087883 Prelid3aQ8VE85 172 aa11.9□□□□□ -0.5
Col3a1-201ENSMUST00000087883 Gm12355A2A4X6 163 aa11.89□□□□□ -0.51
Col3a1-201ENSMUST00000087883 Srsf3P84104 164 aaKnown RBP11.89□□□□□ -0.51
Col3a1-201ENSMUST00000087883 CiartQ3TQ03 375 aa11.89□□□□□ -0.51
Col3a1-201ENSMUST00000087883 Fam53bQ8BGR5 422 aa11.89□□□□□ -0.51
Col3a1-201ENSMUST00000087883 Gm9945Q8BNZ3 91 aa11.89□□□□□ -0.51
Col3a1-201ENSMUST00000087883 BmfQ91ZE9 185 aa11.89□□□□□ -0.51
Col3a1-201ENSMUST00000087883 Frmpd3A0A140LIW3 1774 aa11.89□□□□□ -0.51
Col3a1-201ENSMUST00000087883 Myo7aP97479 2215 aa11.89□□□□□ -0.51
Col3a1-201ENSMUST00000087883 Gm45844A0A1B0GRQ2 137 aa11.89□□□□□ -0.51
Col3a1-201ENSMUST00000087883 Rbbp6P97868 1790 aaKnown RBP11.89□□□□□ -0.51
Col3a1-201ENSMUST00000087883 Awat1A2ADU9 328 aa11.89□□□□□ -0.51
Col3a1-201ENSMUST00000087883 Psg18B2RSG7 476 aa11.89□□□□□ -0.51
Col3a1-201ENSMUST00000087883 Rnf212F6TQD1 307 aa11.89□□□□□ -0.51
Col3a1-201ENSMUST00000087883 Gm13090A2A899 111 aa11.89□□□□□ -0.51
Col3a1-201ENSMUST00000087883 Vmn1r1E9PVR6 306 aa11.89□□□□□ -0.51
Col3a1-201ENSMUST00000087883 Tstd1E9PY03 133 aa11.89□□□□□ -0.51
Col3a1-201ENSMUST00000087883 SellP18337 372 aa11.89□□□□□ -0.51
Retrieved 100 of 22,080 RNA–protein pairs in 50.1 ms