RNA–Protein interactions for RNA: ENSMUST00000053440.7

Ccdc40-202, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ccdc40, Length 3,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-202ENSMUST00000053440 Arl13aQ9D416 372 aa8.13□□□□□ -1.11
Ccdc40-202ENSMUST00000053440 Dda1Q9D9Z5 102 aa8.13□□□□□ -1.11
Ccdc40-202ENSMUST00000053440 A930017K11RikE0CXQ2 571 aa8.13□□□□□ -1.11
Ccdc40-202ENSMUST00000053440 Nat8f7E0CYR6 227 aa8.13□□□□□ -1.11
Ccdc40-202ENSMUST00000053440 Gm10203F6QJ09 66 aa8.13□□□□□ -1.11
Ccdc40-202ENSMUST00000053440 P01655 112 aa8.13□□□□□ -1.11
Ccdc40-202ENSMUST00000053440 Neurog3P70661 214 aa8.13□□□□□ -1.11
Ccdc40-202ENSMUST00000053440 Ube2zQ3UE37 356 aa8.13□□□□□ -1.11
Ccdc40-202ENSMUST00000053440 Smim7Q5RKS2 75 aa8.13□□□□□ -1.11
Ccdc40-202ENSMUST00000053440 Pld4Q8BG07 503 aa8.13□□□□□ -1.11
Ccdc40-202ENSMUST00000053440 Cd200r1Q9ES57 326 aa8.13□□□□□ -1.11
Ccdc40-202ENSMUST00000053440 Cbln1Q9R171 193 aa8.13□□□□□ -1.11
Ccdc40-202ENSMUST00000053440 Ighv7-2A0A0A6YX91 119 aa8.13□□□□□ -1.11
Ccdc40-202ENSMUST00000053440 Lgals9O08573 353 aaKnown RBP8.13□□□□□ -1.11
Ccdc40-202ENSMUST00000053440 Tnfsf11O35235 316 aa8.13□□□□□ -1.11
Ccdc40-202ENSMUST00000053440 P01788 123 aa8.13□□□□□ -1.11
Ccdc40-202ENSMUST00000053440 Fabp4P04117 132 aa8.13□□□□□ -1.11
Ccdc40-202ENSMUST00000053440 Gabra6P16305 453 aa8.13□□□□□ -1.11
Ccdc40-202ENSMUST00000053440 Spam1P48794 512 aa8.13□□□□□ -1.11
Ccdc40-202ENSMUST00000053440 Sfrp2P97299 295 aa8.13□□□□□ -1.11
Ccdc40-202ENSMUST00000053440 CenptQ3TJM4 515 aa8.13□□□□□ -1.11
Ccdc40-202ENSMUST00000053440 Zfp941Q3URY5 674 aa8.13□□□□□ -1.11
Ccdc40-202ENSMUST00000053440 Q6DIA7 600 aa8.13□□□□□ -1.11
Ccdc40-202ENSMUST00000053440 Gm10334Q792Y8 246 aa8.13□□□□□ -1.11
Ccdc40-202ENSMUST00000053440 Actl6bQ99MR0 426 aa8.13□□□□□ -1.11
Ccdc40-202ENSMUST00000053440 Foxj2Q9ES18 565 aa8.13□□□□□ -1.11
Ccdc40-202ENSMUST00000053440 Egr4Q9WUF2 478 aa8.13□□□□□ -1.11
Ccdc40-202ENSMUST00000053440 D830044I16RikA0A1D5RM53 117 aa8.12□□□□□ -1.11
Ccdc40-202ENSMUST00000053440 Samt3A2ARK7 233 aa8.12□□□□□ -1.11
Ccdc40-202ENSMUST00000053440 Esp6A8R0U0 136 aa8.12□□□□□ -1.11
Ccdc40-202ENSMUST00000053440 Gm20422E9PUR3 255 aa8.12□□□□□ -1.11
Ccdc40-202ENSMUST00000053440 Pde6dO55057 150 aa8.12□□□□□ -1.11
Ccdc40-202ENSMUST00000053440 Patz1Q5NBY9 687 aaKnown RBP8.12□□□□□ -1.11
Ccdc40-202ENSMUST00000053440 Zic3Q62521 466 aa8.12□□□□□ -1.11
Ccdc40-202ENSMUST00000053440 Q80VP5 184 aa8.12□□□□□ -1.11
Ccdc40-202ENSMUST00000053440 Pef1Q8BFY6 275 aa8.12□□□□□ -1.11
Ccdc40-202ENSMUST00000053440 C130073F10RikQ8C4L8 201 aa8.12□□□□□ -1.11
Ccdc40-202ENSMUST00000053440 Vwc2Q8C8N3 324 aa8.12□□□□□ -1.11
Ccdc40-202ENSMUST00000053440 Znrf1Q91V17 227 aa8.12□□□□□ -1.11
Ccdc40-202ENSMUST00000053440 A0A286YDM5 308 aa8.12□□□□□ -1.11
Ccdc40-202ENSMUST00000053440 C2cd4aE9Q861 334 aa8.12□□□□□ -1.11
Ccdc40-202ENSMUST00000053440 Bet1lO35153 111 aa8.12□□□□□ -1.11
Ccdc40-202ENSMUST00000053440 Olfr143P34985 313 aa8.12□□□□□ -1.11
Ccdc40-202ENSMUST00000053440 Gm10803Q3TZS6 135 aa8.12□□□□□ -1.11
Ccdc40-202ENSMUST00000053440 Taar4Q5QD15 347 aa8.12□□□□□ -1.11
Ccdc40-202ENSMUST00000053440 Sap30lQ5SQF8 182 aa8.12□□□□□ -1.11
Ccdc40-202ENSMUST00000053440 Npy6rQ61212 371 aa8.12□□□□□ -1.11
Ccdc40-202ENSMUST00000053440 AgerQ62151 402 aa8.12□□□□□ -1.11
Ccdc40-202ENSMUST00000053440 Cxxc4Q6NXI8 198 aa8.12□□□□□ -1.11
Ccdc40-202ENSMUST00000053440 Ubald1Q6P3B2 176 aa8.12□□□□□ -1.11
Ccdc40-202ENSMUST00000053440 Olfr1448Q8VFX1 314 aa8.12□□□□□ -1.11
Ccdc40-202ENSMUST00000053440 Scgb3a2Q920H1 91 aa8.12□□□□□ -1.11
Ccdc40-202ENSMUST00000053440 GmppaQ922H4 420 aa8.12□□□□□ -1.11
Ccdc40-202ENSMUST00000053440 Pus1Q9WU56 423 aa8.12□□□□□ -1.11
Ccdc40-202ENSMUST00000053440 Myo15bI7HPW8 3033 aa8.12□□□□□ -1.11
Ccdc40-202ENSMUST00000053440 Igkv1-132A0A0B4J1H9 120 aa8.12□□□□□ -1.11
Ccdc40-202ENSMUST00000053440 Igkv1-131A0A140T8M8 120 aa8.12□□□□□ -1.11
Ccdc40-202ENSMUST00000053440 Igkv6-23A0A140T8N5 115 aa8.12□□□□□ -1.11
Ccdc40-202ENSMUST00000053440 Mef2bO55087 349 aa8.12□□□□□ -1.11
Ccdc40-202ENSMUST00000053440 Agr2O88312 175 aa8.12□□□□□ -1.11
Ccdc40-202ENSMUST00000053440 Znf48Q3US17 591 aa8.12□□□□□ -1.11
Ccdc40-202ENSMUST00000053440 Znrf2Q71FD5 238 aa8.12□□□□□ -1.11
Ccdc40-202ENSMUST00000053440 Olfr91Q7TRL3 312 aa8.12□□□□□ -1.11
Ccdc40-202ENSMUST00000053440 BC053393A0A0B4J1F6 192 aa8.11□□□□□ -1.11
Ccdc40-202ENSMUST00000053440 Frrs1lB1AXV0 293 aa8.11□□□□□ -1.11
Ccdc40-202ENSMUST00000053440 G430095P16RikE9Q913 147 aa8.11□□□□□ -1.11
Ccdc40-202ENSMUST00000053440 Gm10020E9QAZ2 204 aa8.11□□□□□ -1.11
Ccdc40-202ENSMUST00000053440 Gm2381G3UY53 305 aa8.11□□□□□ -1.11
Ccdc40-202ENSMUST00000053440 A630076J17RikJ3QQ32 107 aa8.11□□□□□ -1.11
Ccdc40-202ENSMUST00000053440 S100a10P08207 97 aa8.11□□□□□ -1.11
Ccdc40-202ENSMUST00000053440 PpoxP51175 477 aa8.11□□□□□ -1.11
Ccdc40-202ENSMUST00000053440 Slc35b1P97858 322 aa8.11□□□□□ -1.11
Ccdc40-202ENSMUST00000053440 Zfp936Q3ULA8 456 aa8.11□□□□□ -1.11
Ccdc40-202ENSMUST00000053440 Prdx2Q61171 198 aaKnown RBP8.11□□□□□ -1.11
Ccdc40-202ENSMUST00000053440 IqcjQ8BPW0 110 aa8.11□□□□□ -1.11
Ccdc40-202ENSMUST00000053440 Harbi1Q8BR93 349 aa8.11□□□□□ -1.11
Ccdc40-202ENSMUST00000053440 Pbp2Q8VIN1 187 aa8.11□□□□□ -1.11
Ccdc40-202ENSMUST00000053440 Rpl15Q9CZM2 204 aaKnown RBP8.11□□□□□ -1.11
Ccdc40-202ENSMUST00000053440 Gpa33Q9JKA5 319 aa8.11□□□□□ -1.11
Ccdc40-202ENSMUST00000053440 Cnot1Q6ZQ08 2375 aaKnown RBP8.11□□□□□ -1.11
Ccdc40-202ENSMUST00000053440 Trbv13-3A0A0B4J1H2 113 aa8.11□□□□□ -1.11
Ccdc40-202ENSMUST00000053440 Olfr779E9PUS9 130 aa8.11□□□□□ -1.11
Ccdc40-202ENSMUST00000053440 MyadmO35682 320 aaKnown RBP8.11□□□□□ -1.11
Ccdc40-202ENSMUST00000053440 Atp5g2P56383 146 aa8.11□□□□□ -1.11
Ccdc40-202ENSMUST00000053440 Rhox10Q4TU83 196 aa8.11□□□□□ -1.11
Ccdc40-202ENSMUST00000053440 Rab31Q921E2 194 aa8.11□□□□□ -1.11
Ccdc40-202ENSMUST00000053440 Lmntd1Q9D4C1 413 aa8.11□□□□□ -1.11
Ccdc40-202ENSMUST00000053440 Cldn34c3J3QJW5 233 aa8.11□□□□□ -1.11
Ccdc40-202ENSMUST00000053440 Cldn34c2J3QNM1 233 aa8.11□□□□□ -1.11
Ccdc40-202ENSMUST00000053440 Tnfrsf17O88472 185 aa8.11□□□□□ -1.11
Ccdc40-202ENSMUST00000053440 Hoxb2P0C1T1 354 aa8.11□□□□□ -1.11
Ccdc40-202ENSMUST00000053440 Rpl31P62900 125 aaKnown RBP8.11□□□□□ -1.11
Ccdc40-202ENSMUST00000053440 Fam3dP97805 223 aa8.11□□□□□ -1.11
Ccdc40-202ENSMUST00000053440 MidnQ3TPJ7 465 aa8.11□□□□□ -1.11
Ccdc40-202ENSMUST00000053440 A230072I06RikQ3UUJ8 172 aa8.11□□□□□ -1.11
Ccdc40-202ENSMUST00000053440 Arrdc5Q497K5 325 aa8.11□□□□□ -1.11
Ccdc40-202ENSMUST00000053440 Hist2h2beQ64524 126 aa8.11□□□□□ -1.11
Ccdc40-202ENSMUST00000053440 Ankrd33Q8BXP5 385 aa8.11□□□□□ -1.11
Ccdc40-202ENSMUST00000053440 Cldn34c1Q8K193 234 aa8.11□□□□□ -1.11
Ccdc40-202ENSMUST00000053440 MavsQ8VCF0 503 aa8.11□□□□□ -1.11
Retrieved 100 of 22,080 RNA–protein pairs in 31.4 ms