RNA–Protein interactions for RNA: ENSMUST00000023147.6

Ciita-201, Transcript of MHC class II transactivator, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ciita, Length 5,254 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ciita-201ENSMUST00000023147 P01799 113 aa9.29□□□□□ -0.92
Ciita-201ENSMUST00000023147 CfdP03953 259 aa9.29□□□□□ -0.92
Ciita-201ENSMUST00000023147 Il11P47873 199 aa9.29□□□□□ -0.92
Ciita-201ENSMUST00000023147 Gm20816Q5FWD4 227 aa9.29□□□□□ -0.92
Ciita-201ENSMUST00000023147 Tnfsf15Q5UBV8 252 aa9.29□□□□□ -0.92
Ciita-201ENSMUST00000023147 GfralQ6SJE0 393 aa9.29□□□□□ -0.92
Ciita-201ENSMUST00000023147 Olfr1380Q7TQT5 311 aa9.29□□□□□ -0.92
Ciita-201ENSMUST00000023147 Dppa1Q810Y7 116 aa9.29□□□□□ -0.92
Ciita-201ENSMUST00000023147 Crispld2Q8BZQ2 495 aa9.29□□□□□ -0.92
Ciita-201ENSMUST00000023147 Slc25a28Q8R0Z5 364 aa9.29□□□□□ -0.92
Ciita-201ENSMUST00000023147 Cisd1Q91WS0 108 aaKnown RBP9.29□□□□□ -0.92
Ciita-201ENSMUST00000023147 Mfap4Q9D1H9 257 aa9.29□□□□□ -0.92
Ciita-201ENSMUST00000023147 9130008F23RikQ9D2Z6 181 aa9.29□□□□□ -0.92
Ciita-201ENSMUST00000023147 Ighv14-4A0A0A6YVR1 117 aa9.29□□□□□ -0.92
Ciita-201ENSMUST00000023147 Adamtsl5D3Z689 485 aa9.29□□□□□ -0.92
Ciita-201ENSMUST00000023147 Adamts17E9Q4D1 1122 aa9.29□□□□□ -0.92
Ciita-201ENSMUST00000023147 Ankrd66J3QNN4 192 aa9.29□□□□□ -0.92
Ciita-201ENSMUST00000023147 Gm10428J3QNV7 132 aa9.29□□□□□ -0.92
Ciita-201ENSMUST00000023147 Itgb1bp1O35671 200 aa9.29□□□□□ -0.92
Ciita-201ENSMUST00000023147 Zfp2P08043 459 aa9.29□□□□□ -0.92
Ciita-201ENSMUST00000023147 Pet100P0DJE0 76 aa9.29□□□□□ -0.92
Ciita-201ENSMUST00000023147 Clpsl2Q3UW21 102 aa9.29□□□□□ -0.92
Ciita-201ENSMUST00000023147 Olfr25Q7TRD6 313 aa9.29□□□□□ -0.92
Ciita-201ENSMUST00000023147 Sh3bgrl3Q91VW3 93 aa9.29□□□□□ -0.92
Ciita-201ENSMUST00000023147 4930412O13RikQ9D5M9 106 aa9.29□□□□□ -0.92
Ciita-201ENSMUST00000023147 Fam53aE9PV82 402 aa9.29□□□□□ -0.92
Ciita-201ENSMUST00000023147 Mrgprb2Q3KNA1 338 aa9.29□□□□□ -0.92
Ciita-201ENSMUST00000023147 Olfr954Q9EQB6 314 aa9.29□□□□□ -0.92
Ciita-201ENSMUST00000023147 Olfr1264Q9R0K2 308 aa9.29□□□□□ -0.92
Ciita-201ENSMUST00000023147 Olfr235E9Q9Z6 312 aa9.29□□□□□ -0.92
Ciita-201ENSMUST00000023147 Rnase2bO35292 155 aa9.29□□□□□ -0.92
Ciita-201ENSMUST00000023147 Gm9944Q8C559 102 aa9.29□□□□□ -0.92
Ciita-201ENSMUST00000023147 Fam213bQ9DB60 201 aa9.29□□□□□ -0.92
Ciita-201ENSMUST00000023147 Tmprss5Q9ER04 455 aa9.29□□□□□ -0.92
Ciita-201ENSMUST00000023147 Trbv17A0A140T8P8 114 aa9.28□□□□□ -0.92
Ciita-201ENSMUST00000023147 Slc35d2Q762D5 326 aa9.28□□□□□ -0.92
Ciita-201ENSMUST00000023147 Myct1Q8R411 188 aa9.28□□□□□ -0.92
Ciita-201ENSMUST00000023147 Egr4Q9WUF2 478 aa9.28□□□□□ -0.92
Ciita-201ENSMUST00000023147 Hoxa5P09021 270 aa9.28□□□□□ -0.92
Ciita-201ENSMUST00000023147 Nhlrc3Q8CCH2 347 aa9.28□□□□□ -0.92
Ciita-201ENSMUST00000023147 Olfr958Q8VEY3 312 aa9.28□□□□□ -0.92
Ciita-201ENSMUST00000023147 Olfr490Q8VFD2 314 aa9.28□□□□□ -0.92
Ciita-201ENSMUST00000023147 Rnd2Q9QYM5 227 aa9.28□□□□□ -0.92
Ciita-201ENSMUST00000023147 Unc119Q9Z2R6 240 aa9.28□□□□□ -0.92
Ciita-201ENSMUST00000023147 Igkv4-91A0A075B5L2 119 aa9.28□□□□□ -0.92
Ciita-201ENSMUST00000023147 Gm5741B2RVA4 72 aa9.28□□□□□ -0.92
Ciita-201ENSMUST00000023147 Eml2Q7TNG5 649 aa9.28□□□□□ -0.92
Ciita-201ENSMUST00000023147 Olfr1404Q8VGE1 313 aa9.28□□□□□ -0.92
Ciita-201ENSMUST00000023147 Znhit3Q9CQK1 151 aa9.28□□□□□ -0.92
Ciita-201ENSMUST00000023147 Ramp3Q9WUP1 147 aa9.28□□□□□ -0.92
Ciita-201ENSMUST00000023147 Pf4Q9Z126 105 aa9.28□□□□□ -0.92
Ciita-201ENSMUST00000023147 Gm28845A0A087WR76 214 aa9.28□□□□□ -0.92
Ciita-201ENSMUST00000023147 Adrb3P25962 400 aa9.28□□□□□ -0.92
Ciita-201ENSMUST00000023147 Hint1P70349 126 aaKnown RBP9.28□□□□□ -0.92
Ciita-201ENSMUST00000023147 CiartQ3TQ03 375 aa9.28□□□□□ -0.92
Ciita-201ENSMUST00000023147 Wfdc5Q4KXB6 126 aa9.28□□□□□ -0.92
Ciita-201ENSMUST00000023147 Fam214bQ8BR27 538 aa9.28□□□□□ -0.92
Ciita-201ENSMUST00000023147 Lipt2Q9D009 231 aa9.28□□□□□ -0.92
Ciita-201ENSMUST00000023147 Adh4Q9QYY9 377 aa9.28□□□□□ -0.92
Ciita-201ENSMUST00000023147 Tmem131O70472 1877 aa9.28□□□□□ -0.92
Ciita-201ENSMUST00000023147 Gm6525A0A0A6YW33 106 aa9.27□□□□□ -0.92
Ciita-201ENSMUST00000023147 Olfr753-ps1A0A140LHN3 164 aa9.27□□□□□ -0.92
Ciita-201ENSMUST00000023147 Awat1A2ADU9 328 aa9.27□□□□□ -0.92
Ciita-201ENSMUST00000023147 Trav13d-3J3QMG8 112 aa9.27□□□□□ -0.92
Ciita-201ENSMUST00000023147 Defa4P28311 92 aa9.27□□□□□ -0.92
Ciita-201ENSMUST00000023147 Acrv1P50289 261 aa9.27□□□□□ -0.92
Ciita-201ENSMUST00000023147 Defa7P50705 93 aa9.27□□□□□ -0.92
Ciita-201ENSMUST00000023147 Olfr816Q8VFU2 312 aa9.27□□□□□ -0.92
Ciita-201ENSMUST00000023147 Olfr1228Q8VGM9 323 aa9.27□□□□□ -0.92
Ciita-201ENSMUST00000023147 Mcrip2Q9CQB2 160 aaKnown RBP9.27□□□□□ -0.92
Ciita-201ENSMUST00000023147 Atxn7l1Q9CZ05 146 aa9.27□□□□□ -0.92
Ciita-201ENSMUST00000023147 2900055J20RikQ9D6G3 140 aa9.27□□□□□ -0.92
Ciita-201ENSMUST00000023147 Sdf2l1Q9ESP1 221 aa9.27□□□□□ -0.92
Ciita-201ENSMUST00000023147 CcsQ9WU84 274 aa9.27□□□□□ -0.92
Ciita-201ENSMUST00000023147 Dock11A2AF47 2073 aa9.27□□□□□ -0.92
Ciita-201ENSMUST00000023147 Shank1D3YZU1 2167 aa9.27□□□□□ -0.93
Ciita-201ENSMUST00000023147 Ighv1-54A0A075B5W5 117 aa9.27□□□□□ -0.93
Ciita-201ENSMUST00000023147 Gm28372A0A087WNV0 220 aa9.27□□□□□ -0.93
Ciita-201ENSMUST00000023147 Olfr149Q60888 311 aa9.27□□□□□ -0.93
Ciita-201ENSMUST00000023147 Olfr875Q7TRE5 310 aa9.27□□□□□ -0.93
Ciita-201ENSMUST00000023147 Olfr1183Q8VFF8 303 aa9.27□□□□□ -0.93
Ciita-201ENSMUST00000023147 Mrpl20Q9CQL4 149 aa9.27□□□□□ -0.93
Ciita-201ENSMUST00000023147 Phlda3Q9WV95 125 aa9.27□□□□□ -0.93
Ciita-201ENSMUST00000023147 6330409D20RikA2AK85 162 aa9.27□□□□□ -0.93
Ciita-201ENSMUST00000023147 Gm21310J3QQ23 232 aa9.27□□□□□ -0.93
Ciita-201ENSMUST00000023147 Cdkn1bP46414 197 aa9.27□□□□□ -0.93
Ciita-201ENSMUST00000023147 Mdga2P60755 949 aa9.27□□□□□ -0.93
Ciita-201ENSMUST00000023147 Rnd3P61588 244 aa9.27□□□□□ -0.93
Ciita-201ENSMUST00000023147 Zfp936Q3ULA8 456 aa9.27□□□□□ -0.93
Ciita-201ENSMUST00000023147 Zdhhc23Q5Y5T3 425 aa9.27□□□□□ -0.93
Ciita-201ENSMUST00000023147 Tbr1Q64336 681 aa9.27□□□□□ -0.93
Ciita-201ENSMUST00000023147 Elovl5Q8BHI7 299 aa9.27□□□□□ -0.93
Ciita-201ENSMUST00000023147 Paqr4Q9JJE4 273 aa9.27□□□□□ -0.93
Ciita-201ENSMUST00000023147 Npc2Q9Z0J0 149 aa9.27□□□□□ -0.93
Ciita-201ENSMUST00000023147 Gm42957D6RFQ2 366 aa9.27□□□□□ -0.93
Ciita-201ENSMUST00000023147 Ear1P97426 155 aa9.27□□□□□ -0.93
Ciita-201ENSMUST00000023147 Q8BG31 207 aa9.27□□□□□ -0.93
Ciita-201ENSMUST00000023147 Olfr877Q8VF62 311 aa9.27□□□□□ -0.93
Ciita-201ENSMUST00000023147 Mogat1Q91ZV4 335 aa9.27□□□□□ -0.93
Ciita-201ENSMUST00000023147 Shisal2bQ9D1Y9 158 aa9.27□□□□□ -0.93
Retrieved 100 of 22,080 RNA–protein pairs in 38.9 ms