RNA–Protein interactions for RNA: ENST00000641891.1

PHGDH-229, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,175 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-229ENST00000641891 PPIFP30405 207 aaKnown RBP13.01□□□□□ -0.33
PHGDH-229ENST00000641891 C8orf86Q6ZUL3 223 aa13.01□□□□□ -0.33
PHGDH-229ENST00000641891 LINC00173Q6ZV60 143 aa13.01□□□□□ -0.33
PHGDH-229ENST00000641891 IL17RELQ6ZVW7 336 aa13.01□□□□□ -0.33
PHGDH-229ENST00000641891 SPATA12Q7Z6I5 190 aa13.01□□□□□ -0.33
PHGDH-229ENST00000641891 SLC50A1Q9BRV3 221 aa13.01□□□□□ -0.33
PHGDH-229ENST00000641891 FBLL1A6NHQ2 334 aaKnown RBP13.01□□□□□ -0.33
PHGDH-229ENST00000641891 LINC00614P0C842 121 aa13.01□□□□□ -0.33
PHGDH-229ENST00000641891 MAP1AP78559 2803 aaPredicted RBP13.01□□□□□ -0.33
PHGDH-229ENST00000641891 A1L4Q6 167 aa13□□□□□ -0.33
PHGDH-229ENST00000641891 ZNF705AQ6ZN79 300 aaPredicted RBP13□□□□□ -0.33
PHGDH-229ENST00000641891 MAPK1IP1LQ8NDC0 245 aa13□□□□□ -0.33
PHGDH-229ENST00000641891 CHCHD1Q96BP2 118 aaKnown RBP13□□□□□ -0.33
PHGDH-229ENST00000641891 USP24Q9UPU5 2620 aa13□□□□□ -0.33
PHGDH-229ENST00000641891 A0A1B0GW15 77 aa13□□□□□ -0.33
PHGDH-229ENST00000641891 SMAD7O15105 426 aaKnown RBP13□□□□□ -0.33
PHGDH-229ENST00000641891 MAJINQ3KP22 176 aa13□□□□□ -0.33
PHGDH-229ENST00000641891 SPATA45Q537H7 98 aa13□□□□□ -0.33
PHGDH-229ENST00000641891 SNHG12Q9BXW3 62 aa13□□□□□ -0.33
PHGDH-229ENST00000641891 PF4V1P10720 104 aa12.99□□□□□ -0.33
PHGDH-229ENST00000641891 BMI1P35226 326 aa12.99□□□□□ -0.33
PHGDH-229ENST00000641891 CTRLP40313 264 aa12.99□□□□□ -0.33
PHGDH-229ENST00000641891 SRSF1Q07955 248 aaKnown RBP eCLIP12.99□□□□□ -0.332e-10■■■□□ 18.2
PHGDH-229ENST00000641891 LURAP1LQ8IV03 231 aa12.99□□□□□ -0.33
PHGDH-229ENST00000641891 PSMG3-AS1Q96PY0 264 aa12.99□□□□□ -0.33
PHGDH-229ENST00000641891 MIEN1Q9BRT3 115 aa12.99□□□□□ -0.33
PHGDH-229ENST00000641891 AGPAT4-IT1Q9H0P7 198 aa12.99□□□□□ -0.33
PHGDH-229ENST00000641891 FBN2P35556 2912 aa12.99□□□□□ -0.33
PHGDH-229ENST00000641891 ORM1P02763 201 aa12.98□□□□□ -0.33
PHGDH-229ENST00000641891 BTF3P20290 206 aaKnown RBP12.98□□□□□ -0.33
PHGDH-229ENST00000641891 ZNF493Q6ZR52 646 aa12.98□□□□□ -0.33
PHGDH-229ENST00000641891 AMN1Q8IY45 258 aa12.98□□□□□ -0.33
PHGDH-229ENST00000641891 FER1L6-AS1Q8NA97 138 aa12.98□□□□□ -0.33
PHGDH-229ENST00000641891 GLMPQ8WWB7 406 aa12.98□□□□□ -0.33
PHGDH-229ENST00000641891 RBAKDNA6NC62 111 aa12.98□□□□□ -0.33
PHGDH-229ENST00000641891 TMEM95Q3KNT9 176 aa12.98□□□□□ -0.33
PHGDH-229ENST00000641891 C2orf88Q9BSF0 95 aa12.98□□□□□ -0.33
PHGDH-229ENST00000641891 IGLC6P0CF74 106 aa12.97□□□□□ -0.33
PHGDH-229ENST00000641891 ATP6V0BQ99437 205 aa12.97□□□□□ -0.33
PHGDH-229ENST00000641891 DSCR9P59020 149 aa12.97□□□□□ -0.33
PHGDH-229ENST00000641891 C20orf173Q96LM9 149 aa12.97□□□□□ -0.33
PHGDH-229ENST00000641891 A0A096LNT2 108 aa12.96□□□□□ -0.33
PHGDH-229ENST00000641891 FABP5P3A8MUU1 101 aa12.96□□□□□ -0.33
PHGDH-229ENST00000641891 D6R8Y8 96 aa12.96□□□□□ -0.33
PHGDH-229ENST00000641891 M0QZK8 103 aa12.96□□□□□ -0.33
PHGDH-229ENST00000641891 RPS20P60866 119 aaKnown RBP12.96□□□□□ -0.33
PHGDH-229ENST00000641891 C16orf92Q96LL3 132 aa12.96□□□□□ -0.33
PHGDH-229ENST00000641891 SELENOKQ9Y6D0 94 aa12.96□□□□□ -0.33
PHGDH-229ENST00000641891 COX6B1P14854 86 aa12.96□□□□□ -0.34
PHGDH-229ENST00000641891 TWIST1Q15672 202 aa12.96□□□□□ -0.34
PHGDH-229ENST00000641891 FAM104BQ5XKR9 115 aa12.96□□□□□ -0.34
PHGDH-229ENST00000641891 Q6ZQT7 251 aa12.96□□□□□ -0.34
PHGDH-229ENST00000641891 OR4X2Q8NGF9 303 aa12.96□□□□□ -0.34
PHGDH-229ENST00000641891 MSRB1Q9NZV6 116 aa12.96□□□□□ -0.34
PHGDH-229ENST00000641891 TIMM8BQ9Y5J9 83 aaPredicted RBP12.96□□□□□ -0.34
PHGDH-229ENST00000641891 NDUFA4O00483 81 aa12.95□□□□□ -0.34
PHGDH-229ENST00000641891 LEPROTL1O95214 131 aa12.95□□□□□ -0.34
PHGDH-229ENST00000641891 IGHV4-59P01825 116 aa12.95□□□□□ -0.34
PHGDH-229ENST00000641891 SLC25A16P16260 332 aa12.95□□□□□ -0.34
PHGDH-229ENST00000641891 DEFB112Q30KQ8 113 aa12.95□□□□□ -0.34
PHGDH-229ENST00000641891 GPHB5Q86YW7 130 aa12.95□□□□□ -0.34
PHGDH-229ENST00000641891 ZNF843Q8N446 348 aa12.95□□□□□ -0.34
PHGDH-229ENST00000641891 USMG5Q96IX5 58 aa12.95□□□□□ -0.34
PHGDH-229ENST00000641891 TMEM70Q9BUB7 260 aa12.95□□□□□ -0.34
PHGDH-229ENST00000641891 C11orf21Q9P2W6 132 aa12.95□□□□□ -0.34
PHGDH-229ENST00000641891 MYO18BQ8IUG5 2567 aa12.95□□□□□ -0.34
PHGDH-229ENST00000641891 ZFYVE26Q68DK2 2539 aa12.94□□□□□ -0.34
PHGDH-229ENST00000641891 H3BUA1 57 aa12.94□□□□□ -0.34
PHGDH-229ENST00000641891 RAB4AP20338 218 aa12.94□□□□□ -0.34
PHGDH-229ENST00000641891 FAM106AQ4KMX7 169 aa12.94□□□□□ -0.34
PHGDH-229ENST00000641891 MRPL51Q4U2R6 128 aaKnown RBP12.94□□□□□ -0.34
PHGDH-229ENST00000641891 TMEM78Q5T7P6 136 aa12.94□□□□□ -0.34
PHGDH-229ENST00000641891 LINC01356Q8N9X3 169 aa12.94□□□□□ -0.34
PHGDH-229ENST00000641891 LOC389332A0A1B0GUA5 103 aa12.94□□□□□ -0.34
PHGDH-229ENST00000641891 SMKR1H3BMG3 65 aa12.94□□□□□ -0.34
PHGDH-229ENST00000641891 IGLV1-40P01703 118 aa12.94□□□□□ -0.34
PHGDH-229ENST00000641891 SRSF2Q01130 221 aaKnown RBP12.94□□□□□ -0.34
PHGDH-229ENST00000641891 LINC01559Q495D7 138 aa12.94□□□□□ -0.34
PHGDH-229ENST00000641891 MRPL53Q96EL3 112 aaKnown RBP12.94□□□□□ -0.34
PHGDH-229ENST00000641891 IGKV3D-20A0A0C4DH25 116 aa12.93□□□□□ -0.34
PHGDH-229ENST00000641891 M0R143 59 aa12.93□□□□□ -0.34
PHGDH-229ENST00000641891 BRI3O95415 125 aa12.93□□□□□ -0.34
PHGDH-229ENST00000641891 DEFB1P60022 68 aa12.93□□□□□ -0.34
PHGDH-229ENST00000641891 CFHR3Q02985 330 aa12.93□□□□□ -0.34
PHGDH-229ENST00000641891 U3KQK5 164 aa12.93□□□□□ -0.34
PHGDH-229ENST00000641891 ZNF462Q96JM2 2506 aa12.93□□□□□ -0.34
PHGDH-229ENST00000641891 GATA3P23771 443 aa12.93□□□□□ -0.34
PHGDH-229ENST00000641891 IFI27P40305 119 aaPredicted RBP12.93□□□□□ -0.34
PHGDH-229ENST00000641891 KRTAP10-9P60411 292 aa12.93□□□□□ -0.34
PHGDH-229ENST00000641891 LBHQ53QV2 105 aaPredicted RBP12.93□□□□□ -0.34
PHGDH-229ENST00000641891 PRSS3P2Q8NHM4 247 aa12.93□□□□□ -0.34
PHGDH-229ENST00000641891 MCRIP2Q9BUT9 160 aaKnown RBP12.93□□□□□ -0.34
PHGDH-229ENST00000641891 SYS1-DBNDD2H3BUS1 97 aa12.92□□□□□ -0.34
PHGDH-229ENST00000641891 NCR2O95944 276 aa12.92□□□□□ -0.34
PHGDH-229ENST00000641891 TGFAP01135 160 aa12.92□□□□□ -0.34
PHGDH-229ENST00000641891 LOXL1Q08397 574 aaPredicted RBP12.92□□□□□ -0.34
PHGDH-229ENST00000641891 FOXE3Q13461 319 aa12.92□□□□□ -0.34
PHGDH-229ENST00000641891 C9orf47Q6ZRZ4 202 aa12.92□□□□□ -0.34
PHGDH-229ENST00000641891 ZNF738Q8NE65 137 aa12.92□□□□□ -0.34
PHGDH-229ENST00000641891 PRELID3AQ96N28 172 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms