RNA–Protein interactions for RNA: ENST00000621676.4

VPS11-208, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS11, Length 3,313 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-208ENST00000621676 IGLC2P0DOY2 106 aa8.03□□□□□ -1.12
VPS11-208ENST00000621676 PMCHP20382 165 aa8.03□□□□□ -1.12
VPS11-208ENST00000621676 FAM106AQ4KMX7 169 aa8.03□□□□□ -1.12
VPS11-208ENST00000621676 BAGE3Q86Y29 109 aa8.03□□□□□ -1.12
VPS11-208ENST00000621676 V9GYV3 84 aa8.03□□□□□ -1.12
VPS11-208ENST00000621676 TRBV7-1A0A0A6YYK4 115 aa8.03□□□□□ -1.12
VPS11-208ENST00000621676 TMEM213A2RRL7 107 aa8.03□□□□□ -1.12
VPS11-208ENST00000621676 C5orf52A6NGY3 159 aa8.03□□□□□ -1.12
VPS11-208ENST00000621676 S100A9P06702 114 aaKnown RBP8.03□□□□□ -1.12
VPS11-208ENST00000621676 DLX4Q92988 240 aaPredicted RBP8.03□□□□□ -1.12
VPS11-208ENST00000621676 C19orf24Q9BVV8 132 aa8.03□□□□□ -1.12
VPS11-208ENST00000621676 POLR3KQ9Y2Y1 108 aaPredicted RBP8.03□□□□□ -1.12
VPS11-208ENST00000621676 DIRC3C9JPN6 131 aa8.02□□□□□ -1.13
VPS11-208ENST00000621676 CRIP1P50238 77 aa8.02□□□□□ -1.13
VPS11-208ENST00000621676 AGPAT4-IT1Q9H0P7 198 aa8.02□□□□□ -1.13
VPS11-208ENST00000621676 ZNF331Q9NQX6 463 aaPredicted RBP8.02□□□□□ -1.13
VPS11-208ENST00000621676 FNDC10F2Z333 226 aa8.02□□□□□ -1.13
VPS11-208ENST00000621676 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.02□□□□□ -1.13
VPS11-208ENST00000621676 NUP35Q8NFH5 326 aa8.02□□□□□ -1.13
VPS11-208ENST00000621676 MRPL18Q9H0U6 180 aaKnown RBP8.02□□□□□ -1.13
VPS11-208ENST00000621676 SMDT1Q9H4I9 107 aa8.02□□□□□ -1.13
VPS11-208ENST00000621676 UFC1Q9Y3C8 167 aa8.02□□□□□ -1.13
VPS11-208ENST00000621676 K7EQM0 130 aa8.01□□□□□ -1.13
VPS11-208ENST00000621676 M0R381 172 aa8.01□□□□□ -1.13
VPS11-208ENST00000621676 NCR2O95944 276 aa8.01□□□□□ -1.13
VPS11-208ENST00000621676 ARMS2P0C7Q2 107 aa8.01□□□□□ -1.13
VPS11-208ENST00000621676 SMIM6P0DI80 62 aa8.01□□□□□ -1.13
VPS11-208ENST00000621676 ACTL10Q5JWF8 245 aa8.01□□□□□ -1.13
VPS11-208ENST00000621676 KLK9Q9UKQ9 250 aa8.01□□□□□ -1.13
VPS11-208ENST00000621676 TRAV12-3A0A0B4J271 114 aa8.01□□□□□ -1.13
VPS11-208ENST00000621676 A0A0G2JLM5 398 aa8.01□□□□□ -1.13
VPS11-208ENST00000621676 IZUMO1RA6ND01 250 aa8.01□□□□□ -1.13
VPS11-208ENST00000621676 PRSS47A8MTI9 375 aa8.01□□□□□ -1.13
VPS11-208ENST00000621676 FOLR2P14207 255 aa8.01□□□□□ -1.13
VPS11-208ENST00000621676 SRIP30626 198 aa8.01□□□□□ -1.13
VPS11-208ENST00000621676 RIPPLY3P57055 190 aa8.01□□□□□ -1.13
VPS11-208ENST00000621676 TMEM183BQ1AE95 376 aa8.01□□□□□ -1.13
VPS11-208ENST00000621676 SPINK13Q1W4C9 94 aa8.01□□□□□ -1.13
VPS11-208ENST00000621676 TMEM183AQ8IXX5 376 aa8.01□□□□□ -1.13
VPS11-208ENST00000621676 OTORQ9NRC9 128 aa8.01□□□□□ -1.13
VPS11-208ENST00000621676 CDC42EP3Q9UKI2 254 aa8.01□□□□□ -1.13
VPS11-208ENST00000621676 M0QZK8 103 aa8.01□□□□□ -1.13
VPS11-208ENST00000621676 UBE2CO00762 179 aa8.01□□□□□ -1.13
VPS11-208ENST00000621676 Q86TA4 180 aa8.01□□□□□ -1.13
VPS11-208ENST00000621676 VN1R17PQ8TDU5 208 aa8.01□□□□□ -1.13
VPS11-208ENST00000621676 UBE2E2Q96LR5 201 aa8.01□□□□□ -1.13
VPS11-208ENST00000621676 DAZ1Q9NQZ3 744 aaKnown RBP8.01□□□□□ -1.13
VPS11-208ENST00000621676 S100A8P05109 93 aa8□□□□□ -1.13
VPS11-208ENST00000621676 PSMB8P28062 276 aa8□□□□□ -1.13
VPS11-208ENST00000621676 KRTAP1-1Q07627 177 aa8□□□□□ -1.13
VPS11-208ENST00000621676 SLAQ13239 276 aa8□□□□□ -1.13
VPS11-208ENST00000621676 PMS2P11Q13670 270 aa8□□□□□ -1.13
VPS11-208ENST00000621676 TMEM78Q5T7P6 136 aa8□□□□□ -1.13
VPS11-208ENST00000621676 SPATA3Q8NHX4 192 aa8□□□□□ -1.13
VPS11-208ENST00000621676 DYNLRB2Q8TF09 96 aa8□□□□□ -1.13
VPS11-208ENST00000621676 GTSF1Q8WW33 167 aa8□□□□□ -1.13
VPS11-208ENST00000621676 C9JCJ5 164 aa8□□□□□ -1.13
VPS11-208ENST00000621676 IGHG4P01861 327 aa8□□□□□ -1.13
VPS11-208ENST00000621676 GPX1P07203 203 aa8□□□□□ -1.13
VPS11-208ENST00000621676 PRDM13Q9H4Q3 707 aa8□□□□□ -1.13
VPS11-208ENST00000621676 MUC4Q99102 2169 aa8□□□□□ -1.13
VPS11-208ENST00000621676 IGHV3-73A0A0B4J1V6 119 aa8□□□□□ -1.13
VPS11-208ENST00000621676 PPP1R2P9O14990 202 aa8□□□□□ -1.13
VPS11-208ENST00000621676 S100A4P26447 101 aaKnown RBP8□□□□□ -1.13
VPS11-208ENST00000621676 DEFB131AP59861 70 aa8□□□□□ -1.13
VPS11-208ENST00000621676 PSG3Q16557 428 aa8□□□□□ -1.13
VPS11-208ENST00000621676 RBPMS2Q6ZRY4 209 aaKnown RBP8□□□□□ -1.13
VPS11-208ENST00000621676 IGF2BP2-AS1Q96M15 143 aa8□□□□□ -1.13
VPS11-208ENST00000621676 IL36BQ9NZH7 164 aa8□□□□□ -1.13
VPS11-208ENST00000621676 J3QLI3 93 aa7.99□□□□□ -1.13
VPS11-208ENST00000621676 GNRH2O43555 120 aa7.99□□□□□ -1.13
VPS11-208ENST00000621676 ZNF253O75346 499 aa7.99□□□□□ -1.13
VPS11-208ENST00000621676 IGLV2-11P01706 119 aa7.99□□□□□ -1.13
VPS11-208ENST00000621676 TWIST1Q15672 202 aa7.99□□□□□ -1.13
VPS11-208ENST00000621676 ATOH7Q8N100 152 aa7.99□□□□□ -1.13
VPS11-208ENST00000621676 LINC01006Q8NI28 216 aa7.99□□□□□ -1.13
VPS11-208ENST00000621676 ZNF418Q8TF45 676 aaPredicted RBP7.99□□□□□ -1.13
VPS11-208ENST00000621676 ANAPC16Q96DE5 110 aa7.99□□□□□ -1.13
VPS11-208ENST00000621676 PMCHL2Q9BQD1 86 aa7.99□□□□□ -1.13
VPS11-208ENST00000621676 SH2D1AO60880 128 aa7.99□□□□□ -1.13
VPS11-208ENST00000621676 CD99P14209 185 aa7.99□□□□□ -1.13
VPS11-208ENST00000621676 EVI2AP22794 236 aa7.99□□□□□ -1.13
VPS11-208ENST00000621676 SAMD10Q9BYL1 202 aa7.99□□□□□ -1.13
VPS11-208ENST00000621676 TRAV26-2A0A0B4J265 109 aa7.98□□□□□ -1.13
VPS11-208ENST00000621676 B4DEV8 164 aa7.98□□□□□ -1.13
VPS11-208ENST00000621676 SAP30O75446 220 aa7.98□□□□□ -1.13
VPS11-208ENST00000621676 GAS8-AS1O95177 125 aa7.98□□□□□ -1.13
VPS11-208ENST00000621676 GATA1P15976 413 aaPredicted RBP7.98□□□□□ -1.13
VPS11-208ENST00000621676 PRR9Q5T870 116 aa7.98□□□□□ -1.13
VPS11-208ENST00000621676 TRAV8-2A0A0B4J237 113 aa7.98□□□□□ -1.13
VPS11-208ENST00000621676 TMEM189A5PLL7 270 aa7.98□□□□□ -1.13
VPS11-208ENST00000621676 H3BVH4 76 aa7.98□□□□□ -1.13
VPS11-208ENST00000621676 MRPS12O15235 138 aaKnown RBP7.98□□□□□ -1.13
VPS11-208ENST00000621676 EMP1P54849 157 aa7.98□□□□□ -1.13
VPS11-208ENST00000621676 FAM74A4Q5TZK3 123 aa7.98□□□□□ -1.13
VPS11-208ENST00000621676 LYZL1Q6UWQ5 148 aa7.98□□□□□ -1.13
VPS11-208ENST00000621676 TMEM61Q8N0U2 210 aa7.98□□□□□ -1.13
VPS11-208ENST00000621676 OR1N2Q8NGR9 330 aa7.98□□□□□ -1.13
VPS11-208ENST00000621676 PRO1933Q9H354 126 aa7.98□□□□□ -1.13
VPS11-208ENST00000621676 RNF114Q9Y508 228 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms