RNA–Protein interactions for RNA: ENST00000619438.4

SGMS1-210, Transcript of sphingomyelin synthase 1, humanhuman

TSL 5 BASIC

Gene SGMS1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-210ENST00000619438 RPLP1P05386 114 aaKnown RBP16.47■□□□□ 0.23
SGMS1-210ENST00000619438 PSG9Q00887 426 aa16.47■□□□□ 0.23
SGMS1-210ENST00000619438 C19orf54Q5BKX5 351 aa16.47■□□□□ 0.23
SGMS1-210ENST00000619438 MRPL54Q6P161 138 aaKnown RBP16.47■□□□□ 0.23
SGMS1-210ENST00000619438 LCNL1Q6ZST4 164 aa16.47■□□□□ 0.23
SGMS1-210ENST00000619438 KLHL30-AS1Q8NEE0 82 aa16.47■□□□□ 0.23
SGMS1-210ENST00000619438 OR4B1Q8NGF8 309 aa16.47■□□□□ 0.23
SGMS1-210ENST00000619438 NEU1Q99519 415 aa16.47■□□□□ 0.23
SGMS1-210ENST00000619438 ZNF580Q9UK33 172 aa16.47■□□□□ 0.23
SGMS1-210ENST00000619438 TP53TG3Q9ULZ0 132 aa16.47■□□□□ 0.23
SGMS1-210ENST00000619438 SPINK4O60575 86 aa16.46■□□□□ 0.23
SGMS1-210ENST00000619438 ZNF253O75346 499 aa16.46■□□□□ 0.23
SGMS1-210ENST00000619438 P01737 135 aa16.46■□□□□ 0.23
SGMS1-210ENST00000619438 IGHV3-23P01764 117 aa16.46■□□□□ 0.23
SGMS1-210ENST00000619438 CD33P20138 364 aa16.46■□□□□ 0.23
SGMS1-210ENST00000619438 OR10J3Q5JRS4 329 aa16.46■□□□□ 0.23
SGMS1-210ENST00000619438 C16orf54Q6UWD8 224 aa16.46■□□□□ 0.23
SGMS1-210ENST00000619438 LINC00322Q6ZN03 302 aaPredicted RBP16.46■□□□□ 0.23
SGMS1-210ENST00000619438 DIRC3C9JPN6 131 aa16.46■□□□□ 0.23
SGMS1-210ENST00000619438 RAB9AP51151 201 aa16.46■□□□□ 0.23
SGMS1-210ENST00000619438 PAFAH1B2P68402 229 aa16.46■□□□□ 0.23
SGMS1-210ENST00000619438 AAMDCQ9H7C9 122 aa16.46■□□□□ 0.23
SGMS1-210ENST00000619438 TRBV7-1A0A0A6YYK4 115 aa16.45■□□□□ 0.22
SGMS1-210ENST00000619438 GRIFINA4D1Z8 144 aa16.45■□□□□ 0.22
SGMS1-210ENST00000619438 HIGD1CA8MV81 97 aa16.45■□□□□ 0.22
SGMS1-210ENST00000619438 GZMBP10144 247 aa16.45■□□□□ 0.22
SGMS1-210ENST00000619438 DEFA6Q01524 100 aa16.45■□□□□ 0.22
SGMS1-210ENST00000619438 CFHR3Q02985 330 aa16.45■□□□□ 0.22
SGMS1-210ENST00000619438 PSG3Q16557 428 aa16.45■□□□□ 0.22
SGMS1-210ENST00000619438 CDPF1Q6NVV7 123 aa16.45■□□□□ 0.22
SGMS1-210ENST00000619438 C8orf86Q6ZUL3 223 aa16.45■□□□□ 0.22
SGMS1-210ENST00000619438 DAZAP1Q96EP5 407 aaKnown RBP16.45■□□□□ 0.22
SGMS1-210ENST00000619438 TRAV8-1A0A0A6YYK1 113 aa16.44■□□□□ 0.22
SGMS1-210ENST00000619438 A0A1B0GXF2 115 aa16.44■□□□□ 0.22
SGMS1-210ENST00000619438 PPIFP30405 207 aaKnown RBP16.44■□□□□ 0.22
SGMS1-210ENST00000619438 LINC00310P59036 64 aa16.44■□□□□ 0.22
SGMS1-210ENST00000619438 C18orf65Q6ZTR6 163 aa16.44■□□□□ 0.22
SGMS1-210ENST00000619438 PRNTQ86SH4 94 aa16.44■□□□□ 0.22
SGMS1-210ENST00000619438 EEF1AKMT3Q96AZ1 226 aa16.44■□□□□ 0.22
SGMS1-210ENST00000619438 FBLL1A6NHQ2 334 aaKnown RBP16.43■□□□□ 0.22
SGMS1-210ENST00000619438 NUPR1O60356 82 aa16.43■□□□□ 0.22
SGMS1-210ENST00000619438 BRI3O95415 125 aa16.43■□□□□ 0.22
SGMS1-210ENST00000619438 APCSP02743 223 aa16.43■□□□□ 0.22
SGMS1-210ENST00000619438 PSMB8P28062 276 aa16.43■□□□□ 0.22
SGMS1-210ENST00000619438 GPR183P32249 361 aa16.43■□□□□ 0.22
SGMS1-210ENST00000619438 ZFAND3Q9H8U3 227 aa16.43■□□□□ 0.22
SGMS1-210ENST00000619438 PSG8Q9UQ74 426 aa16.43■□□□□ 0.22
SGMS1-210ENST00000619438 RAB4BP61018 213 aa16.43■□□□□ 0.22
SGMS1-210ENST00000619438 TOMM20LQ6UXN7 152 aa16.43■□□□□ 0.22
SGMS1-210ENST00000619438 CCDC140Q96MF4 163 aa16.43■□□□□ 0.22
SGMS1-210ENST00000619438 G3V4G9 280 aa16.42■□□□□ 0.22
SGMS1-210ENST00000619438 CLEC3BP05452 202 aa16.42■□□□□ 0.22
SGMS1-210ENST00000619438 RNF152Q8N8N0 203 aa16.42■□□□□ 0.22
SGMS1-210ENST00000619438 KLK15Q9H2R5 256 aa16.42■□□□□ 0.22
SGMS1-210ENST00000619438 GNB4Q9HAV0 340 aa16.42■□□□□ 0.22
SGMS1-210ENST00000619438 FAM223BA6NKX1 122 aa16.41■□□□□ 0.22
SGMS1-210ENST00000619438 LINC00587B1AMM8 73 aa16.41■□□□□ 0.22
SGMS1-210ENST00000619438 SERF1AO75920 110 aa16.41■□□□□ 0.22
SGMS1-210ENST00000619438 CSN1S1P47710 185 aa16.41■□□□□ 0.22
SGMS1-210ENST00000619438 FOXA3P55318 350 aaPredicted RBP16.41■□□□□ 0.22
SGMS1-210ENST00000619438 TPPP2P59282 170 aa16.41■□□□□ 0.22
SGMS1-210ENST00000619438 COX8CQ7Z4L0 72 aa16.41■□□□□ 0.22
SGMS1-210ENST00000619438 BAGE3Q86Y29 109 aa16.41■□□□□ 0.22
SGMS1-210ENST00000619438 FAM223AQ8IWN6 122 aa16.41■□□□□ 0.22
SGMS1-210ENST00000619438 WFDC9Q8NEX5 89 aa16.41■□□□□ 0.22
SGMS1-210ENST00000619438 A0A087X0K7 114 aa16.4■□□□□ 0.22
SGMS1-210ENST00000619438 ZNF785A8K8V0 405 aa16.4■□□□□ 0.22
SGMS1-210ENST00000619438 IGLV1-40P01703 118 aa16.4■□□□□ 0.22
SGMS1-210ENST00000619438 OXLD1Q5BKU9 147 aa16.4■□□□□ 0.22
SGMS1-210ENST00000619438 RBPMS2Q6ZRY4 209 aaKnown RBP16.4■□□□□ 0.22
SGMS1-210ENST00000619438 GTSF1Q8WW33 167 aa16.4■□□□□ 0.22
SGMS1-210ENST00000619438 SMAD5-AS1Q9Y6J3 95 aa16.4■□□□□ 0.22
SGMS1-210ENST00000619438 GDF5OSQ5U4N7 250 aa16.4■□□□□ 0.22
SGMS1-210ENST00000619438 DUX3Q96PT4 197 aa16.4■□□□□ 0.22
SGMS1-210ENST00000619438 M0R3E3 92 aa16.39■□□□□ 0.21
SGMS1-210ENST00000619438 CCL24O00175 119 aa16.39■□□□□ 0.21
SGMS1-210ENST00000619438 WIPF1O43516 503 aa16.39■□□□□ 0.21
SGMS1-210ENST00000619438 SLAQ13239 276 aa16.39■□□□□ 0.21
SGMS1-210ENST00000619438 C1orf194Q5T5A4 169 aa16.39■□□□□ 0.21
SGMS1-210ENST00000619438 ZC2HC1AQ96GY0 325 aa16.39■□□□□ 0.21
SGMS1-210ENST00000619438 UBE2E2Q96LR5 201 aa16.39■□□□□ 0.21
SGMS1-210ENST00000619438 IGLL1P15814 213 aa16.38■□□□□ 0.21
SGMS1-210ENST00000619438 HBBP68871 147 aa16.38■□□□□ 0.21
SGMS1-210ENST00000619438 RELQ04864 619 aaPredicted RBP16.38■□□□□ 0.21
SGMS1-210ENST00000619438 ATP5G2Q06055 141 aa16.38■□□□□ 0.21
SGMS1-210ENST00000619438 DEFB136Q30KP8 78 aa16.38■□□□□ 0.21
SGMS1-210ENST00000619438 TCF24Q7RTU0 167 aa16.38■□□□□ 0.21
SGMS1-210ENST00000619438 MS4A10Q96PG2 267 aa16.38■□□□□ 0.21
SGMS1-210ENST00000619438 H3BUA1 57 aa16.37■□□□□ 0.21
SGMS1-210ENST00000619438 BUB3O43684 328 aa16.37■□□□□ 0.21
SGMS1-210ENST00000619438 SRIP30626 198 aa16.37■□□□□ 0.21
SGMS1-210ENST00000619438 CTAG1AP78358 180 aa16.37■□□□□ 0.21
SGMS1-210ENST00000619438 IQCJQ1A5X6 159 aa16.37■□□□□ 0.21
SGMS1-210ENST00000619438 CLEC19AQ6UXS0 136 aa16.37■□□□□ 0.21
SGMS1-210ENST00000619438 C4orf3Q8WVX3 66 aa16.37■□□□□ 0.21
SGMS1-210ENST00000619438 NOTCH3Q9UM47 2321 aa16.37■□□□□ 0.21
SGMS1-210ENST00000619438 A8MWP6 167 aa16.37■□□□□ 0.21
SGMS1-210ENST00000619438 PKIAP61925 76 aa16.37■□□□□ 0.21
SGMS1-210ENST00000619438 KIAA1644Q3SXP7 199 aa16.37■□□□□ 0.21
SGMS1-210ENST00000619438 SAMD5Q5TGI4 173 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms