RNA–Protein interactions for RNA: ENST00000616710.4

TNFRSF11A-205, Transcript of TNF receptor superfamily member 11a, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNFRSF11A, Length 3,809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11A-205ENST00000616710 MAPKAPK5-AS1Q8N8E1 139 aa11.15□□□□□ -0.63
TNFRSF11A-205ENST00000616710 ZNF492Q9P255 531 aa11.15□□□□□ -0.63
TNFRSF11A-205ENST00000616710 ZNF256Q9Y2P7 627 aaPredicted RBP11.15□□□□□ -0.63
TNFRSF11A-205ENST00000616710 C9JAW5 83 aa11.14□□□□□ -0.63
TNFRSF11A-205ENST00000616710 RRN3P1Q2M238 152 aa11.14□□□□□ -0.63
TNFRSF11A-205ENST00000616710 C17orf58Q2M2W7 97 aa11.14□□□□□ -0.63
TNFRSF11A-205ENST00000616710 TMEM95Q3KNT9 176 aa11.14□□□□□ -0.63
TNFRSF11A-205ENST00000616710 C8orf46Q8TAG6 207 aa11.14□□□□□ -0.63
TNFRSF11A-205ENST00000616710 SAP25Q8TEE9 199 aa11.14□□□□□ -0.63
TNFRSF11A-205ENST00000616710 RUSC1-AS1Q66K80 236 aa11.14□□□□□ -0.63
TNFRSF11A-205ENST00000616710 UBTD1Q9HAC8 227 aa11.14□□□□□ -0.63
TNFRSF11A-205ENST00000616710 TNFRSF6BO95407 300 aa11.14□□□□□ -0.63
TNFRSF11A-205ENST00000616710 TMEM105Q8N8V8 129 aa11.14□□□□□ -0.63
TNFRSF11A-205ENST00000616710 GFRA4Q9GZZ7 299 aa11.14□□□□□ -0.63
TNFRSF11A-205ENST00000616710 ARRDC1-AS1Q9H2J1 176 aa11.14□□□□□ -0.63
TNFRSF11A-205ENST00000616710 TSPAN13O95857 204 aa11.13□□□□□ -0.63
TNFRSF11A-205ENST00000616710 Q6ZUT4 128 aa11.13□□□□□ -0.63
TNFRSF11A-205ENST00000616710 NDUFA4L2Q9NRX3 87 aa11.13□□□□□ -0.63
TNFRSF11A-205ENST00000616710 C19orf71A6NCJ1 209 aa11.13□□□□□ -0.63
TNFRSF11A-205ENST00000616710 CT83Q5H943 113 aa11.13□□□□□ -0.63
TNFRSF11A-205ENST00000616710 HTN1P15515 57 aa11.12□□□□□ -0.63
TNFRSF11A-205ENST00000616710 DLX6P56179 175 aa11.12□□□□□ -0.63
TNFRSF11A-205ENST00000616710 ZNF562Q6V9R5 426 aa11.12□□□□□ -0.63
TNFRSF11A-205ENST00000616710 KLHL30-AS1Q8NEE0 82 aa11.12□□□□□ -0.63
TNFRSF11A-205ENST00000616710 EXPH5Q8NEV8 1989 aa11.12□□□□□ -0.63
TNFRSF11A-205ENST00000616710 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.12□□□□□ -0.63
TNFRSF11A-205ENST00000616710 PRR7Q8TB68 274 aa11.12□□□□□ -0.63
TNFRSF11A-205ENST00000616710 PRSS22Q9GZN4 317 aa11.12□□□□□ -0.63
TNFRSF11A-205ENST00000616710 SPRR3Q9UBC9 169 aa11.12□□□□□ -0.63
TNFRSF11A-205ENST00000616710 SIVA1O15304 175 aa11.12□□□□□ -0.63
TNFRSF11A-205ENST00000616710 HLA-DMBP28068 263 aa11.12□□□□□ -0.63
TNFRSF11A-205ENST00000616710 RITA1Q96K30 269 aa11.12□□□□□ -0.63
TNFRSF11A-205ENST00000616710 MLST8Q9BVC4 326 aa11.12□□□□□ -0.63
TNFRSF11A-205ENST00000616710 DDB2Q92466 427 aa11.11□□□□□ -0.63
TNFRSF11A-205ENST00000616710 MUC3AQ02505 3323 aa11.11□□□□□ -0.63
TNFRSF11A-205ENST00000616710 CUL9Q8IWT3 2517 aa11.1□□□□□ -0.63
TNFRSF11A-205ENST00000616710 TRAV12-3A0A0B4J271 114 aa11.1□□□□□ -0.63
TNFRSF11A-205ENST00000616710 E9PLD3 99 aa11.1□□□□□ -0.63
TNFRSF11A-205ENST00000616710 SLC25A16P16260 332 aa11.1□□□□□ -0.63
TNFRSF11A-205ENST00000616710 LGALS3P17931 250 aaKnown RBP11.1□□□□□ -0.63
TNFRSF11A-205ENST00000616710 ERCC8Q13216 396 aa11.1□□□□□ -0.63
TNFRSF11A-205ENST00000616710 ODF1Q14990 250 aa11.1□□□□□ -0.63
TNFRSF11A-205ENST00000616710 A0A096LNJ9 63 aa11.1□□□□□ -0.63
TNFRSF11A-205ENST00000616710 TRAV2A0A0B4J234 112 aa11.1□□□□□ -0.63
TNFRSF11A-205ENST00000616710 TMEM78Q5T7P6 136 aa11.1□□□□□ -0.63
TNFRSF11A-205ENST00000616710 PMS2CLQ68D20 193 aa11.1□□□□□ -0.63
TNFRSF11A-205ENST00000616710 Q6AWC8 147 aa11.1□□□□□ -0.63
TNFRSF11A-205ENST00000616710 Q6ZT83 130 aa11.1□□□□□ -0.63
TNFRSF11A-205ENST00000616710 TCTEX1D4Q5JR98 221 aa11.09□□□□□ -0.63
TNFRSF11A-205ENST00000616710 ZFHX4Q86UP3 3567 aa11.09□□□□□ -0.63
TNFRSF11A-205ENST00000616710 IGKV1D-37A0A075B6S9 117 aa11.09□□□□□ -0.63
TNFRSF11A-205ENST00000616710 WISP2O76076 250 aa11.09□□□□□ -0.63
TNFRSF11A-205ENST00000616710 ATP5IP56385 69 aaPredicted RBP11.09□□□□□ -0.63
TNFRSF11A-205ENST00000616710 NPC2P61916 151 aa11.09□□□□□ -0.63
TNFRSF11A-205ENST00000616710 KLRB1Q12918 225 aa11.09□□□□□ -0.63
TNFRSF11A-205ENST00000616710 ECSCRQ19T08 205 aa11.09□□□□□ -0.63
TNFRSF11A-205ENST00000616710 RNF125Q96EQ8 232 aa11.09□□□□□ -0.63
TNFRSF11A-205ENST00000616710 NXT2Q9NPJ8 142 aaKnown RBP11.09□□□□□ -0.63
TNFRSF11A-205ENST00000616710 KALRNO60229 2985 aa11.09□□□□□ -0.63
TNFRSF11A-205ENST00000616710 GAGE12JA6NER3 117 aa11.09□□□□□ -0.63
TNFRSF11A-205ENST00000616710 GAGE7O76087 117 aa11.09□□□□□ -0.63
TNFRSF11A-205ENST00000616710 GAGE12FP0CL80 117 aa11.09□□□□□ -0.63
TNFRSF11A-205ENST00000616710 GAGE12GP0CL81 117 aa11.09□□□□□ -0.63
TNFRSF11A-205ENST00000616710 GAGE12IP0CL82 117 aa11.09□□□□□ -0.63
TNFRSF11A-205ENST00000616710 GAGE4Q13068 117 aa11.09□□□□□ -0.63
TNFRSF11A-205ENST00000616710 FAM74A4Q5TZK3 123 aa11.09□□□□□ -0.63
TNFRSF11A-205ENST00000616710 PPDPFLQ8WWR9 84 aa11.09□□□□□ -0.63
TNFRSF11A-205ENST00000616710 PTPRBP23467 1997 aa11.08□□□□□ -0.64
TNFRSF11A-205ENST00000616710 EGR2P11161 476 aaPredicted RBP11.08□□□□□ -0.64
TNFRSF11A-205ENST00000616710 C10orf126Q8N4M7 172 aa11.08□□□□□ -0.64
TNFRSF11A-205ENST00000616710 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.08□□□□□ -0.64
TNFRSF11A-205ENST00000616710 LOC400499M0QZD8 3231 aa11.08□□□□□ -0.64
TNFRSF11A-205ENST00000616710 IGHV1-18A0A0C4DH31 117 aa11.08□□□□□ -0.64
TNFRSF11A-205ENST00000616710 GP9P14770 177 aa11.08□□□□□ -0.64
TNFRSF11A-205ENST00000616710 DEFB109BQ30KR1 87 aa11.08□□□□□ -0.64
TNFRSF11A-205ENST00000616710 SPATA25Q9BR10 227 aa11.08□□□□□ -0.64
TNFRSF11A-205ENST00000616710 SS18L1O75177 396 aaPredicted RBP11.08□□□□□ -0.64
TNFRSF11A-205ENST00000616710 PHLDA3Q9Y5J5 127 aa11.08□□□□□ -0.64
TNFRSF11A-205ENST00000616710 MGAQ8IWI9 3026 aa11.08□□□□□ -0.64
TNFRSF11A-205ENST00000616710 ADAMTS20P59510 1910 aa11.07□□□□□ -0.64
TNFRSF11A-205ENST00000616710 C7orf69Q9H7B7 122 aa11.07□□□□□ -0.64
TNFRSF11A-205ENST00000616710 C9orf106Q8NAJ2 232 aa11.07□□□□□ -0.64
TNFRSF11A-205ENST00000616710 KLF12Q9Y4X4 402 aa11.07□□□□□ -0.64
TNFRSF11A-205ENST00000616710 LRP4O75096 1905 aa11.07□□□□□ -0.64
TNFRSF11A-205ENST00000616710 DSCAMO60469 2012 aa11.07□□□□□ -0.64
TNFRSF11A-205ENST00000616710 TRBV7-9A0A0J9YWB2 115 aa11.07□□□□□ -0.64
TNFRSF11A-205ENST00000616710 LINC01548A6NM66 108 aa11.07□□□□□ -0.64
TNFRSF11A-205ENST00000616710 TMEM262E9PQX1 116 aa11.07□□□□□ -0.64
TNFRSF11A-205ENST00000616710 IGKV3-15P01624 115 aa11.07□□□□□ -0.64
TNFRSF11A-205ENST00000616710 SMPXQ9UHP9 88 aa11.07□□□□□ -0.64
TNFRSF11A-205ENST00000616710 PIP4P2Q8N4L2 257 aa11.06□□□□□ -0.64
TNFRSF11A-205ENST00000616710 PRADC1Q9BSG0 188 aa11.06□□□□□ -0.64
TNFRSF11A-205ENST00000616710 TACC2O95359 2948 aa11.06□□□□□ -0.64
TNFRSF11A-205ENST00000616710 CRIP1P50238 77 aa11.06□□□□□ -0.64
TNFRSF11A-205ENST00000616710 DMXL2Q8TDJ6 3036 aa11.06□□□□□ -0.64
TNFRSF11A-205ENST00000616710 TRBV19A0A075B6N1 114 aa11.06□□□□□ -0.64
TNFRSF11A-205ENST00000616710 CCDC179H3BU77 68 aa11.06□□□□□ -0.64
TNFRSF11A-205ENST00000616710 LAGE3Q14657 143 aa11.06□□□□□ -0.64
TNFRSF11A-205ENST00000616710 NTN5Q8WTR8 489 aaPredicted RBP11.06□□□□□ -0.64
TNFRSF11A-205ENST00000616710 FABP5P3A8MUU1 101 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms