RNA–Protein interactions for RNA: ENST00000616253.1

AL353770.3-201, humanhuman

TSL 1 (best) BASIC

Gene AL353770.3, Length 1,988 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL353770.3-201ENST00000616253 ERCC8Q13216 396 aa7.62□□□□□ -1.19
AL353770.3-201ENST00000616253 CT83Q5H943 113 aa7.62□□□□□ -1.19
AL353770.3-201ENST00000616253 MRPL54Q6P161 138 aaKnown RBP7.62□□□□□ -1.19
AL353770.3-201ENST00000616253 MRPL53Q96EL3 112 aaKnown RBP7.62□□□□□ -1.19
AL353770.3-201ENST00000616253 NAT8BQ9UHF3 227 aa7.62□□□□□ -1.19
AL353770.3-201ENST00000616253 SMPXQ9UHP9 88 aa7.62□□□□□ -1.19
AL353770.3-201ENST00000616253 SELENOKQ9Y6D0 94 aa7.62□□□□□ -1.19
AL353770.3-201ENST00000616253 HIGD1CA8MV81 97 aa7.61□□□□□ -1.19
AL353770.3-201ENST00000616253 RPL11P62913 178 aaKnown RBP7.61□□□□□ -1.19
AL353770.3-201ENST00000616253 RPL19P84098 196 aaKnown RBP7.61□□□□□ -1.19
AL353770.3-201ENST00000616253 SCGB2A2Q13296 93 aa7.61□□□□□ -1.19
AL353770.3-201ENST00000616253 C18orf65Q6ZTR6 163 aa7.61□□□□□ -1.19
AL353770.3-201ENST00000616253 NUP35Q8NFH5 326 aa7.61□□□□□ -1.19
AL353770.3-201ENST00000616253 PRR25Q96S07 402 aa7.61□□□□□ -1.19
AL353770.3-201ENST00000616253 TMEM213A2RRL7 107 aa7.6□□□□□ -1.19
AL353770.3-201ENST00000616253 RBAKDNA6NC62 111 aa7.6□□□□□ -1.19
AL353770.3-201ENST00000616253 A8MWL6 223 aa7.6□□□□□ -1.19
AL353770.3-201ENST00000616253 LINC00587B1AMM8 73 aa7.6□□□□□ -1.19
AL353770.3-201ENST00000616253 SOCS3O14543 225 aa7.6□□□□□ -1.19
AL353770.3-201ENST00000616253 HOXD3P31249 432 aaPredicted RBP7.6□□□□□ -1.19
AL353770.3-201ENST00000616253 CRIP1P50238 77 aa7.6□□□□□ -1.19
AL353770.3-201ENST00000616253 SYNJ2BPP57105 145 aa7.6□□□□□ -1.19
AL353770.3-201ENST00000616253 SAPCD1Q5SSQ6 148 aa7.6□□□□□ -1.19
AL353770.3-201ENST00000616253 TCF24Q7RTU0 167 aa7.6□□□□□ -1.19
AL353770.3-201ENST00000616253 OR4B1Q8NGF8 309 aa7.6□□□□□ -1.19
AL353770.3-201ENST00000616253 OR2D3Q8NGH3 330 aa7.6□□□□□ -1.19
AL353770.3-201ENST00000616253 C20orf173Q96LM9 149 aa7.6□□□□□ -1.19
AL353770.3-201ENST00000616253 GPR61Q9BZJ8 451 aa7.6□□□□□ -1.19
AL353770.3-201ENST00000616253 NRN1Q9NPD7 142 aa7.6□□□□□ -1.19
AL353770.3-201ENST00000616253 TMEM160Q9NX00 188 aa7.6□□□□□ -1.19
AL353770.3-201ENST00000616253 NF1P21359 2839 aa7.6□□□□□ -1.19
AL353770.3-201ENST00000616253 HIVEP2P31629 2446 aa7.6□□□□□ -1.19
AL353770.3-201ENST00000616253 IGKV3-7A0A075B6H7 116 aa7.6□□□□□ -1.19
AL353770.3-201ENST00000616253 SNURFLB1AK76 121 aa7.6□□□□□ -1.19
AL353770.3-201ENST00000616253 SRD5A1P18405 259 aa7.6□□□□□ -1.19
AL353770.3-201ENST00000616253 DEFB136Q30KP8 78 aa7.6□□□□□ -1.19
AL353770.3-201ENST00000616253 TCTEX1D4Q5JR98 221 aa7.6□□□□□ -1.19
AL353770.3-201ENST00000616253 KHDC1LQ5JSQ8 128 aa7.6□□□□□ -1.19
AL353770.3-201ENST00000616253 REC114Q7Z4M0 266 aa7.6□□□□□ -1.19
AL353770.3-201ENST00000616253 ZNF738Q8NE65 137 aa7.6□□□□□ -1.19
AL353770.3-201ENST00000616253 GTSF1Q8WW33 167 aa7.6□□□□□ -1.19
AL353770.3-201ENST00000616253 NDFIP1Q9BT67 221 aa7.6□□□□□ -1.19
AL353770.3-201ENST00000616253 MRPL18Q9H0U6 180 aaKnown RBP7.6□□□□□ -1.19
AL353770.3-201ENST00000616253 CLEC5AQ9NY25 188 aa7.6□□□□□ -1.19
AL353770.3-201ENST00000616253 A8MWP6 167 aa7.59□□□□□ -1.19
AL353770.3-201ENST00000616253 SH2D1AO60880 128 aa7.59□□□□□ -1.19
AL353770.3-201ENST00000616253 RNASE1P07998 156 aaKnown RBP7.59□□□□□ -1.19
AL353770.3-201ENST00000616253 GZMBP10144 247 aa7.59□□□□□ -1.19
AL353770.3-201ENST00000616253 BMI1P35226 326 aa7.59□□□□□ -1.19
AL353770.3-201ENST00000616253 RAB4BP61018 213 aa7.59□□□□□ -1.19
AL353770.3-201ENST00000616253 FAM162BQ5T6X4 162 aa7.59□□□□□ -1.19
AL353770.3-201ENST00000616253 WDR73Q6P4I2 378 aa7.59□□□□□ -1.19
AL353770.3-201ENST00000616253 COX8CQ7Z4L0 72 aa7.59□□□□□ -1.19
AL353770.3-201ENST00000616253 GNB1LQ9BYB4 327 aa7.59□□□□□ -1.19
AL353770.3-201ENST00000616253 GFRA4Q9GZZ7 299 aa7.59□□□□□ -1.19
AL353770.3-201ENST00000616253 GSN-AS1Q9NRJ2 163 aa7.59□□□□□ -1.19
AL353770.3-201ENST00000616253 LGALS9O00182 355 aa7.59□□□□□ -1.2
AL353770.3-201ENST00000616253 LY6G6DO95868 133 aa7.59□□□□□ -1.2
AL353770.3-201ENST00000616253 HOXA5P20719 270 aa7.59□□□□□ -1.2
AL353770.3-201ENST00000616253 CDX1P47902 265 aaPredicted RBP7.59□□□□□ -1.2
AL353770.3-201ENST00000616253 TMEM136Q6ZRR5 245 aa7.59□□□□□ -1.2
AL353770.3-201ENST00000616253 C4orf3Q8WVX3 66 aa7.59□□□□□ -1.2
AL353770.3-201ENST00000616253 PGLYRP4Q96LB8 373 aa7.59□□□□□ -1.2
AL353770.3-201ENST00000616253 AGPAT4-IT1Q9H0P7 198 aa7.59□□□□□ -1.2
AL353770.3-201ENST00000616253 XKRY2A2RUG3 117 aa7.58□□□□□ -1.2
AL353770.3-201ENST00000616253 MT-ND6P03923 174 aa7.58□□□□□ -1.2
AL353770.3-201ENST00000616253 ZNF80P51504 273 aaPredicted RBP7.58□□□□□ -1.2
AL353770.3-201ENST00000616253 SLURP1P55000 103 aa7.58□□□□□ -1.2
AL353770.3-201ENST00000616253 COX19Q49B96 90 aa7.58□□□□□ -1.2
AL353770.3-201ENST00000616253 TMEM78Q5T7P6 136 aa7.58□□□□□ -1.2
AL353770.3-201ENST00000616253 GFI1BQ5VTD9 330 aa7.58□□□□□ -1.2
AL353770.3-201ENST00000616253 HIST2H2BDQ6DRA6 164 aa7.58□□□□□ -1.2
AL353770.3-201ENST00000616253 RBPMS2Q6ZRY4 209 aaKnown RBP7.58□□□□□ -1.2
AL353770.3-201ENST00000616253 ZNF418Q8TF45 676 aaPredicted RBP7.58□□□□□ -1.2
AL353770.3-201ENST00000616253 SETD2Q9BYW2 2564 aaPredicted RBP7.58□□□□□ -1.2
AL353770.3-201ENST00000616253 FAM231BA6NCW3 169 aa7.57□□□□□ -1.2
AL353770.3-201ENST00000616253 HLA-DQA1P01909 254 aa7.57□□□□□ -1.2
AL353770.3-201ENST00000616253 ZNF705DP0CH99 300 aaPredicted RBP7.57□□□□□ -1.2
AL353770.3-201ENST00000616253 ZNF705BP0CI00 300 aaPredicted RBP7.57□□□□□ -1.2
AL353770.3-201ENST00000616253 BTF3P20290 206 aaKnown RBP7.57□□□□□ -1.2
AL353770.3-201ENST00000616253 RASL11AQ6T310 242 aa7.57□□□□□ -1.2
AL353770.3-201ENST00000616253 C9orf47Q6ZRZ4 202 aa7.57□□□□□ -1.2
AL353770.3-201ENST00000616253 ATP5L2Q7Z4Y8 100 aa7.57□□□□□ -1.2
AL353770.3-201ENST00000616253 KLHL30-AS1Q8NEE0 82 aa7.57□□□□□ -1.2
AL353770.3-201ENST00000616253 WIPF2Q8TF74 440 aaPredicted RBP7.57□□□□□ -1.2
AL353770.3-201ENST00000616253 A0A1B0GXF2 115 aa7.57□□□□□ -1.2
AL353770.3-201ENST00000616253 LINC01619G3V211 115 aa7.57□□□□□ -1.2
AL353770.3-201ENST00000616253 ZNF138P52744 262 aa7.57□□□□□ -1.2
AL353770.3-201ENST00000616253 HILS1P60008 231 aa7.57□□□□□ -1.2
AL353770.3-201ENST00000616253 KLF5Q13887 457 aaPredicted RBP7.57□□□□□ -1.2
AL353770.3-201ENST00000616253 PDZD11Q5EBL8 140 aa7.57□□□□□ -1.2
AL353770.3-201ENST00000616253 OR11H1Q8NG94 326 aa7.57□□□□□ -1.2
AL353770.3-201ENST00000616253 NIT2Q9NQR4 276 aa7.57□□□□□ -1.2
AL353770.3-201ENST00000616253 TMSB15BA0A087X1C1 80 aa7.56□□□□□ -1.2
AL353770.3-201ENST00000616253 TMEM189A5PLL7 270 aa7.56□□□□□ -1.2
AL353770.3-201ENST00000616253 C2orf70A6NJV1 201 aa7.56□□□□□ -1.2
AL353770.3-201ENST00000616253 IFITM10A6NMD0 228 aa7.56□□□□□ -1.2
AL353770.3-201ENST00000616253 OVOL1O14753 267 aa7.56□□□□□ -1.2
AL353770.3-201ENST00000616253 CAMPP49913 170 aa7.56□□□□□ -1.2
AL353770.3-201ENST00000616253 DEFB1P60022 68 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms