RNA–Protein interactions for RNA: ENST00000612273.1

COL6A1-207, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL6A1, Length 3,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-207ENST00000612273 CFHR4Q92496 578 aa10.96□□□□□ -0.66
COL6A1-207ENST00000612273 AP1S3Q96PC3 154 aa10.96□□□□□ -0.66
COL6A1-207ENST00000612273 VPS13CQ709C8 3753 aa10.95□□□□□ -0.66
COL6A1-207ENST00000612273 LINC01548A6NM66 108 aa10.95□□□□□ -0.66
COL6A1-207ENST00000612273 F8W735 103 aaPredicted RBP10.95□□□□□ -0.66
COL6A1-207ENST00000612273 H3BUT2 72 aa10.95□□□□□ -0.66
COL6A1-207ENST00000612273 MRPS12O15235 138 aaKnown RBP10.95□□□□□ -0.66
COL6A1-207ENST00000612273 PIP4P2Q8N4L2 257 aa10.95□□□□□ -0.66
COL6A1-207ENST00000612273 DEFB125Q8N687 156 aa10.95□□□□□ -0.66
COL6A1-207ENST00000612273 UFC1Q9Y3C8 167 aa10.95□□□□□ -0.66
COL6A1-207ENST00000612273 TRAV26-2A0A0B4J265 109 aa10.95□□□□□ -0.66
COL6A1-207ENST00000612273 C15orf32Q32M92 178 aa10.95□□□□□ -0.66
COL6A1-207ENST00000612273 CLEC19AQ6UXS0 136 aa10.95□□□□□ -0.66
COL6A1-207ENST00000612273 C2orf91Q6ZV80 131 aa10.95□□□□□ -0.66
COL6A1-207ENST00000612273 RAB1BQ9H0U4 201 aa10.95□□□□□ -0.66
COL6A1-207ENST00000612273 CACNA1AO00555 2505 aa10.95□□□□□ -0.66
COL6A1-207ENST00000612273 CTSGP08311 255 aa10.94□□□□□ -0.66
COL6A1-207ENST00000612273 DEFB1P60022 68 aa10.94□□□□□ -0.66
COL6A1-207ENST00000612273 HIST1H1AQ02539 215 aaPredicted RBP10.94□□□□□ -0.66
COL6A1-207ENST00000612273 IGLV11-55A0A075B6I3 123 aa10.94□□□□□ -0.66
COL6A1-207ENST00000612273 COX8AP10176 69 aa10.94□□□□□ -0.66
COL6A1-207ENST00000612273 RPL7P18124 248 aaKnown RBP10.94□□□□□ -0.66
COL6A1-207ENST00000612273 ZFP36P26651 326 aaKnown RBP10.94□□□□□ -0.66
COL6A1-207ENST00000612273 TMEM97Q5BJF2 176 aa10.94□□□□□ -0.66
COL6A1-207ENST00000612273 VKORC1Q9BQB6 163 aa10.94□□□□□ -0.66
COL6A1-207ENST00000612273 SMAD5-AS1Q9Y6J3 95 aa10.94□□□□□ -0.66
COL6A1-207ENST00000612273 HOXB4P17483 251 aaPredicted RBP10.94□□□□□ -0.66
COL6A1-207ENST00000612273 IL17RELQ6ZVW7 336 aa10.94□□□□□ -0.66
COL6A1-207ENST00000612273 IFI27L1Q96BM0 104 aa10.94□□□□□ -0.66
COL6A1-207ENST00000612273 WI2-2373I1.2A0A1W2PRP0 233 aa10.93□□□□□ -0.66
COL6A1-207ENST00000612273 TMEM219Q86XT9 240 aa10.93□□□□□ -0.66
COL6A1-207ENST00000612273 ZNF562Q6V9R5 426 aa10.93□□□□□ -0.66
COL6A1-207ENST00000612273 KLK15Q9H2R5 256 aa10.93□□□□□ -0.66
COL6A1-207ENST00000612273 POLQO75417 2590 aa10.93□□□□□ -0.66
COL6A1-207ENST00000612273 FBLL1A6NHQ2 334 aaKnown RBP10.92□□□□□ -0.66
COL6A1-207ENST00000612273 HBDP02042 147 aa10.92□□□□□ -0.66
COL6A1-207ENST00000612273 LEPP41159 167 aa10.92□□□□□ -0.66
COL6A1-207ENST00000612273 CST9LQ9H4G1 147 aa10.92□□□□□ -0.66
COL6A1-207ENST00000612273 TRAV30A0A087WSZ9 112 aa10.92□□□□□ -0.66
COL6A1-207ENST00000612273 GAGE12BA1L429 117 aa10.92□□□□□ -0.66
COL6A1-207ENST00000612273 GAGE10A6NGK3 116 aa10.92□□□□□ -0.66
COL6A1-207ENST00000612273 SAP30O75446 220 aa10.92□□□□□ -0.66
COL6A1-207ENST00000612273 CRYBG3Q68DQ2 2970 aa10.91□□□□□ -0.66
COL6A1-207ENST00000612273 PPP1R14DQ9NXH3 145 aa10.91□□□□□ -0.66
COL6A1-207ENST00000612273 GCSHP23434 173 aa10.91□□□□□ -0.66
COL6A1-207ENST00000612273 C16orf54Q6UWD8 224 aa10.91□□□□□ -0.66
COL6A1-207ENST00000612273 LYPD1Q8N2G4 141 aa10.91□□□□□ -0.66
COL6A1-207ENST00000612273 MS4A6AQ9H2W1 248 aa10.91□□□□□ -0.66
COL6A1-207ENST00000612273 IGHV7-81A0A0B4J1V7 117 aa10.9□□□□□ -0.66
COL6A1-207ENST00000612273 PRTN3P24158 256 aa10.9□□□□□ -0.66
COL6A1-207ENST00000612273 IGHG4P01861 327 aa10.9□□□□□ -0.66
COL6A1-207ENST00000612273 TRGV3P03979 118 aa10.9□□□□□ -0.66
COL6A1-207ENST00000612273 SAPCD1Q5SSQ6 148 aa10.9□□□□□ -0.66
COL6A1-207ENST00000612273 GTSCR1Q86UQ5 136 aa10.9□□□□□ -0.66
COL6A1-207ENST00000612273 ATP6V0E1O15342 81 aa10.9□□□□□ -0.67
COL6A1-207ENST00000612273 A1L4Q6 167 aa10.89□□□□□ -0.67
COL6A1-207ENST00000612273 RPL11P62913 178 aaKnown RBP10.89□□□□□ -0.67
COL6A1-207ENST00000612273 OR11H6Q8NGC7 330 aa10.89□□□□□ -0.67
COL6A1-207ENST00000612273 IGKV2D-26A0A0A0MRZ7 120 aa10.89□□□□□ -0.67
COL6A1-207ENST00000612273 CD5LO43866 347 aa10.89□□□□□ -0.67
COL6A1-207ENST00000612273 RIPPLY3P57055 190 aa10.89□□□□□ -0.67
COL6A1-207ENST00000612273 Q6AWC8 147 aa10.89□□□□□ -0.67
COL6A1-207ENST00000612273 RNF5Q99942 180 aa10.89□□□□□ -0.67
COL6A1-207ENST00000612273 FOXC2Q99958 501 aa10.89□□□□□ -0.67
COL6A1-207ENST00000612273 UBTD1Q9HAC8 227 aa10.89□□□□□ -0.67
COL6A1-207ENST00000612273 TMEM160Q9NX00 188 aa10.89□□□□□ -0.67
COL6A1-207ENST00000612273 A0A1W2PPR1 153 aa10.89□□□□□ -0.67
COL6A1-207ENST00000612273 NDUFA3O95167 84 aa10.89□□□□□ -0.67
COL6A1-207ENST00000612273 KIR3DS1Q14943 382 aa10.89□□□□□ -0.67
COL6A1-207ENST00000612273 OCIAD2Q56VL3 154 aa10.89□□□□□ -0.67
COL6A1-207ENST00000612273 PEF1Q9UBV8 284 aaKnown RBP10.89□□□□□ -0.67
COL6A1-207ENST00000612273 RAXQ9Y2V3 346 aa10.89□□□□□ -0.67
COL6A1-207ENST00000612273 K7ERJ3 54 aa10.88□□□□□ -0.67
COL6A1-207ENST00000612273 FCER1GP30273 86 aa10.88□□□□□ -0.67
COL6A1-207ENST00000612273 BMI1P35226 326 aa10.88□□□□□ -0.67
COL6A1-207ENST00000612273 LY6G5BQ8NDX9 201 aa10.88□□□□□ -0.67
COL6A1-207ENST00000612273 FABP5P3A8MUU1 101 aa10.88□□□□□ -0.67
COL6A1-207ENST00000612273 NPBQ8NG41 125 aa10.88□□□□□ -0.67
COL6A1-207ENST00000612273 GLMPQ8WWB7 406 aa10.88□□□□□ -0.67
COL6A1-207ENST00000612273 WFDC12Q8WWY7 111 aa10.88□□□□□ -0.67
COL6A1-207ENST00000612273 JMJD8Q96S16 334 aa10.88□□□□□ -0.67
COL6A1-207ENST00000612273 MAP1LC3AQ9H492 121 aa10.88□□□□□ -0.67
COL6A1-207ENST00000612273 HIF1ANQ9NWT6 349 aa10.88□□□□□ -0.67
COL6A1-207ENST00000612273 C11orf21Q9P2W6 132 aa10.88□□□□□ -0.67
COL6A1-207ENST00000612273 FAM208BQ5VWN6 2430 aa10.88□□□□□ -0.67
COL6A1-207ENST00000612273 CELSR2Q9HCU4 2923 aa10.88□□□□□ -0.67
COL6A1-207ENST00000612273 TNFRSF6BO95407 300 aa10.87□□□□□ -0.67
COL6A1-207ENST00000612273 IGF1P05019 195 aa10.87□□□□□ -0.67
COL6A1-207ENST00000612273 PDE6HQ13956 83 aa10.87□□□□□ -0.67
COL6A1-207ENST00000612273 TMEM158Q8WZ71 300 aa10.87□□□□□ -0.67
COL6A1-207ENST00000612273 K7ENP7 123 aa10.87□□□□□ -0.67
COL6A1-207ENST00000612273 FGF6P10767 208 aa10.87□□□□□ -0.67
COL6A1-207ENST00000612273 S100A7AQ86SG5 101 aa10.87□□□□□ -0.67
COL6A1-207ENST00000612273 ZNF493Q6ZR52 646 aa10.87□□□□□ -0.67
COL6A1-207ENST00000612273 DTX2Q86UW9 622 aa10.87□□□□□ -0.67
COL6A1-207ENST00000612273 ACACBO00763 2458 aa10.86□□□□□ -0.67
COL6A1-207ENST00000612273 A0A1B0GW15 77 aa10.86□□□□□ -0.67
COL6A1-207ENST00000612273 SMAD7O15105 426 aaKnown RBP10.86□□□□□ -0.67
COL6A1-207ENST00000612273 SAA4P35542 130 aa10.86□□□□□ -0.67
COL6A1-207ENST00000612273 ADORA2A-AS1P86434 159 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms