RNA–Protein interactions for RNA: ENST00000602898.1

SPTBN1-206, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,942 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-206ENST00000602898 C16orf97H3BN30 126 aa3.84□□□□□ -1.79
SPTBN1-206ENST00000602898 WDR86Q86TI4 376 aa3.84□□□□□ -1.79
SPTBN1-206ENST00000602898 AMN1Q8IY45 258 aa3.84□□□□□ -1.79
SPTBN1-206ENST00000602898 C6orf223Q8N319 242 aa3.84□□□□□ -1.79
SPTBN1-206ENST00000602898 LINC00337Q8N6G1 96 aa3.84□□□□□ -1.79
SPTBN1-206ENST00000602898 TAF15Q92804 592 aaKnown RBP eCLIP3.84□□□□□ -1.79
SPTBN1-206ENST00000602898 C11orf52Q96A22 123 aa3.84□□□□□ -1.79
SPTBN1-206ENST00000602898 IL36RNQ9UBH0 155 aa3.84□□□□□ -1.79
SPTBN1-206ENST00000602898 SZT2Q5T011 3432 aa3.84□□□□□ -1.79
SPTBN1-206ENST00000602898 TRAV8-1A0A0A6YYK1 113 aa3.84□□□□□ -1.8
SPTBN1-206ENST00000602898 TRAV13-1A0A0B4J241 112 aa3.84□□□□□ -1.8
SPTBN1-206ENST00000602898 RSPO1Q2MKA7 263 aaPredicted RBP3.84□□□□□ -1.8
SPTBN1-206ENST00000602898 AAED1Q7RTV5 226 aa3.84□□□□□ -1.8
SPTBN1-206ENST00000602898 MARCH3Q86UD3 253 aa3.84□□□□□ -1.8
SPTBN1-206ENST00000602898 C11orf53Q8IXP5 236 aa3.84□□□□□ -1.8
SPTBN1-206ENST00000602898 ZNF799Q96GE5 643 aa3.84□□□□□ -1.8
SPTBN1-206ENST00000602898 ARHGAP5-AS1Q96IT6 56 aa3.84□□□□□ -1.8
SPTBN1-206ENST00000602898 PGLYRP4Q96LB8 373 aa3.84□□□□□ -1.8
SPTBN1-206ENST00000602898 LINC01600Q96MT4 127 aa3.84□□□□□ -1.8
SPTBN1-206ENST00000602898 RTL8AQ9BWD3 113 aa3.84□□□□□ -1.8
SPTBN1-206ENST00000602898 ARHGAP21Q5T5U3 1957 aa3.83□□□□□ -1.8
SPTBN1-206ENST00000602898 K7EM74 188 aa3.83□□□□□ -1.8
SPTBN1-206ENST00000602898 CDK2AP2O75956 126 aa3.83□□□□□ -1.8
SPTBN1-206ENST00000602898 BGLAPP02818 100 aa3.83□□□□□ -1.8
SPTBN1-206ENST00000602898 ZNF706Q9Y5V0 76 aaPredicted RBP3.83□□□□□ -1.8
SPTBN1-206ENST00000602898 DOCK7Q96N67 2140 aa3.83□□□□□ -1.8
SPTBN1-206ENST00000602898 KIAA1549LQ6ZVL6 1849 aa3.83□□□□□ -1.8
SPTBN1-206ENST00000602898 TRAV8-3A0A0A6YYJ7 113 aa3.83□□□□□ -1.8
SPTBN1-206ENST00000602898 GCHFRP30047 84 aa3.83□□□□□ -1.8
SPTBN1-206ENST00000602898 UBE2D3P61077 147 aa3.83□□□□□ -1.8
SPTBN1-206ENST00000602898 UBE2D2P62837 147 aa3.83□□□□□ -1.8
SPTBN1-206ENST00000602898 VMA21Q3ZAQ7 101 aa3.83□□□□□ -1.8
SPTBN1-206ENST00000602898 DCANP1Q8TF63 244 aa3.83□□□□□ -1.8
SPTBN1-206ENST00000602898 ZNF747Q9BV97 191 aa3.83□□□□□ -1.8
SPTBN1-206ENST00000602898 AGPAT4-IT1Q9H0P7 198 aa3.83□□□□□ -1.8
SPTBN1-206ENST00000602898 R4GMQ9 66 aa3.83□□□□□ -1.8
SPTBN1-206ENST00000602898 LOC100996750A0A140TA64 210 aa3.82□□□□□ -1.8
SPTBN1-206ENST00000602898 H0Y9J4 135 aa3.82□□□□□ -1.8
SPTBN1-206ENST00000602898 FOXS1O43638 330 aa3.82□□□□□ -1.8
SPTBN1-206ENST00000602898 IL4P05112 153 aa3.82□□□□□ -1.8
SPTBN1-206ENST00000602898 CST6Q15828 149 aa3.82□□□□□ -1.8
SPTBN1-206ENST00000602898 C6orf99Q4VX62 202 aa3.82□□□□□ -1.8
SPTBN1-206ENST00000602898 TMEM105Q8N8V8 129 aa3.82□□□□□ -1.8
SPTBN1-206ENST00000602898 CHCHD10Q8WYQ3 142 aaPredicted RBP3.82□□□□□ -1.8
SPTBN1-206ENST00000602898 C1orf147Q96MC9 270 aaPredicted RBP3.82□□□□□ -1.8
SPTBN1-206ENST00000602898 SHANK2-AS3Q9BTD1 123 aa3.82□□□□□ -1.8
SPTBN1-206ENST00000602898 KRTAP4-6Q9BYQ5 205 aa3.82□□□□□ -1.8
SPTBN1-206ENST00000602898 EPDR1Q9UM22 224 aa3.82□□□□□ -1.8
SPTBN1-206ENST00000602898 F11RQ9Y624 299 aaKnown RBP3.82□□□□□ -1.8
SPTBN1-206ENST00000602898 CACNA1CQ13936 2221 aa3.82□□□□□ -1.8
SPTBN1-206ENST00000602898 BRCA2P51587 3418 aa3.82□□□□□ -1.8
SPTBN1-206ENST00000602898 IGKV1D-42A0A075B6H8 117 aa3.82□□□□□ -1.8
SPTBN1-206ENST00000602898 C17orf51A8MQB3 221 aa3.82□□□□□ -1.8
SPTBN1-206ENST00000602898 EPM2AB3EWF7 344 aa3.82□□□□□ -1.8
SPTBN1-206ENST00000602898 SPINK4O60575 86 aa3.82□□□□□ -1.8
SPTBN1-206ENST00000602898 IGKCP01834 107 aa3.82□□□□□ -1.8
SPTBN1-206ENST00000602898 TCRAP04437 139 aa3.82□□□□□ -1.8
SPTBN1-206ENST00000602898 DAD1P61803 113 aa3.82□□□□□ -1.8
SPTBN1-206ENST00000602898 PCP2Q8IVA1 136 aa3.82□□□□□ -1.8
SPTBN1-206ENST00000602898 MRPL20Q9BYC9 149 aaKnown RBP3.82□□□□□ -1.8
SPTBN1-206ENST00000602898 OCIAD1Q9NX40 245 aa3.82□□□□□ -1.8
SPTBN1-206ENST00000602898 PCNX3Q9H6A9 2034 aa3.81□□□□□ -1.8
SPTBN1-206ENST00000602898 IGHV1OR21-1A0A087WYE8 117 aa3.81□□□□□ -1.8
SPTBN1-206ENST00000602898 C12orf77C9JDV5 145 aa3.81□□□□□ -1.8
SPTBN1-206ENST00000602898 P0DMU3 169 aa3.81□□□□□ -1.8
SPTBN1-206ENST00000602898 FAM231AP0DMU4 169 aa3.81□□□□□ -1.8
SPTBN1-206ENST00000602898 FAM231CP0DMU5 169 aa3.81□□□□□ -1.8
SPTBN1-206ENST00000602898 PSMB2P49721 201 aa3.81□□□□□ -1.8
SPTBN1-206ENST00000602898 SLC25A45Q8N413 288 aa3.81□□□□□ -1.8
SPTBN1-206ENST00000602898 CACNG5Q9UF02 275 aa3.81□□□□□ -1.8
SPTBN1-206ENST00000602898 NOTCH4Q99466 2003 aa3.81□□□□□ -1.8
SPTBN1-206ENST00000602898 IGKV1-8A0A0C4DH67 115 aa3.81□□□□□ -1.8
SPTBN1-206ENST00000602898 NDUFC2-KCTD14E9PQ53 114 aa3.81□□□□□ -1.8
SPTBN1-206ENST00000602898 GNLYP22749 145 aa3.81□□□□□ -1.8
SPTBN1-206ENST00000602898 MFAP2P55001 183 aa3.81□□□□□ -1.8
SPTBN1-206ENST00000602898 RPL18Q07020 188 aaKnown RBP3.81□□□□□ -1.8
SPTBN1-206ENST00000602898 C22orf39Q6P5X5 142 aa3.81□□□□□ -1.8
SPTBN1-206ENST00000602898 PCSK4Q6UW60 755 aa3.81□□□□□ -1.8
SPTBN1-206ENST00000602898 GTSCR1Q86UQ5 136 aa3.81□□□□□ -1.8
SPTBN1-206ENST00000602898 LINC00311Q8N616 119 aa3.81□□□□□ -1.8
SPTBN1-206ENST00000602898 NABP1Q96AH0 204 aa3.81□□□□□ -1.8
SPTBN1-206ENST00000602898 RNF185Q96GF1 192 aa3.81□□□□□ -1.8
SPTBN1-206ENST00000602898 HHLA3Q9XRX5 114 aa3.81□□□□□ -1.8
SPTBN1-206ENST00000602898 KIF26BQ2KJY2 2108 aa3.81□□□□□ -1.8
SPTBN1-206ENST00000602898 TRBV25-1A0A075B6N4 114 aa3.81□□□□□ -1.8
SPTBN1-206ENST00000602898 MYMXA0A1B0GTQ4 84 aa3.81□□□□□ -1.8
SPTBN1-206ENST00000602898 M0R381 172 aa3.81□□□□□ -1.8
SPTBN1-206ENST00000602898 CRYGSP22914 178 aa3.81□□□□□ -1.8
SPTBN1-206ENST00000602898 CA6P23280 308 aa3.81□□□□□ -1.8
SPTBN1-206ENST00000602898 LMO4P61968 165 aa3.81□□□□□ -1.8
SPTBN1-206ENST00000602898 RPS21P63220 83 aaKnown RBP3.81□□□□□ -1.8
SPTBN1-206ENST00000602898 ERCC8Q13216 396 aa3.81□□□□□ -1.8
SPTBN1-206ENST00000602898 SCGB1D4Q6XE38 83 aa3.81□□□□□ -1.8
SPTBN1-206ENST00000602898 OR5AS1Q8N127 324 aa3.81□□□□□ -1.8
SPTBN1-206ENST00000602898 LHFPL6Q9Y693 200 aa3.81□□□□□ -1.8
SPTBN1-206ENST00000602898 TNRC6BQ9UPQ9 1833 aaKnown RBP3.8□□□□□ -1.8
SPTBN1-206ENST00000602898 RANBP2P49792 3224 aaKnown RBP3.8□□□□□ -1.8
SPTBN1-206ENST00000602898 TECTAO75443 2155 aa3.8□□□□□ -1.8
SPTBN1-206ENST00000602898 IGKV1D-43A0A0B4J1Z2 117 aa3.8□□□□□ -1.8
SPTBN1-206ENST00000602898 UBE2L5PA0A1B0GUS4 154 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms