RNA–Protein interactions for RNA: ENST00000600387.5

ARHGEF1-221, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene ARHGEF1, Length 2,272 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-221ENST00000600387 FOXI2Q6ZQN5 318 aa14.5□□□□□ -0.09
ARHGEF1-221ENST00000600387 FANCD2OSQ96PS1 177 aa14.5□□□□□ -0.09
ARHGEF1-221ENST00000600387 PSMG3-AS1Q96PY0 264 aa14.5□□□□□ -0.09
ARHGEF1-221ENST00000600387 GAS8-AS1O95177 125 aa14.5□□□□□ -0.09
ARHGEF1-221ENST00000600387 TMEM11P17152 192 aa14.5□□□□□ -0.09
ARHGEF1-221ENST00000600387 PKDREJQ9NTG1 2253 aa14.5□□□□□ -0.09
ARHGEF1-221ENST00000600387 IGLL5B9A064 214 aa14.49□□□□□ -0.09
ARHGEF1-221ENST00000600387 F8W735 103 aaPredicted RBP14.49□□□□□ -0.09
ARHGEF1-221ENST00000600387 SCGB2A1O75556 95 aa14.49□□□□□ -0.09
ARHGEF1-221ENST00000600387 C21orf62Q9NYP8 219 aa14.49□□□□□ -0.09
ARHGEF1-221ENST00000600387 E7EQL1 145 aa14.49□□□□□ -0.09
ARHGEF1-221ENST00000600387 AZU1P20160 251 aa14.49□□□□□ -0.09
ARHGEF1-221ENST00000600387 CD300EQ496F6 205 aaPredicted RBP14.49□□□□□ -0.09
ARHGEF1-221ENST00000600387 IGHG4P01861 327 aa14.48□□□□□ -0.09
ARHGEF1-221ENST00000600387 DEFB124Q8NES8 71 aa14.48□□□□□ -0.09
ARHGEF1-221ENST00000600387 IGFBPL1Q8WX77 278 aa14.48□□□□□ -0.09
ARHGEF1-221ENST00000600387 SPANXB1Q9NS25 103 aaPredicted RBP14.48□□□□□ -0.09
ARHGEF1-221ENST00000600387 IGLV2-18A0A075B6J9 118 aa14.48□□□□□ -0.09
ARHGEF1-221ENST00000600387 SPAARA0A1B0GVQ0 90 aa14.48□□□□□ -0.09
ARHGEF1-221ENST00000600387 IGF2-ASQ6U949 168 aa14.48□□□□□ -0.09
ARHGEF1-221ENST00000600387 DTX2Q86UW9 622 aa14.48□□□□□ -0.09
ARHGEF1-221ENST00000600387 ZNF479Q96JC4 524 aa14.48□□□□□ -0.09
ARHGEF1-221ENST00000600387 TMEM160Q9NX00 188 aa14.48□□□□□ -0.09
ARHGEF1-221ENST00000600387 SMAD5-AS1Q9Y6J3 95 aa14.48□□□□□ -0.09
ARHGEF1-221ENST00000600387 PRRG2O14669 202 aa14.47□□□□□ -0.09
ARHGEF1-221ENST00000600387 MYOZ3Q8TDC0 251 aa14.47□□□□□ -0.09
ARHGEF1-221ENST00000600387 RP1L1Q8IWN7 2480 aaPredicted RBP14.47□□□□□ -0.09
ARHGEF1-221ENST00000600387 SMG1Q96Q15 3661 aaKnown RBP14.47□□□□□ -0.09
ARHGEF1-221ENST00000600387 CFAP47Q6ZTR5 3102 aa14.47□□□□□ -0.09
ARHGEF1-221ENST00000600387 TRAV40A0A0B4J280 105 aa14.46□□□□□ -0.09
ARHGEF1-221ENST00000600387 PRSS47A8MTI9 375 aa14.46□□□□□ -0.09
ARHGEF1-221ENST00000600387 TTC9CQ8N5M4 171 aa14.46□□□□□ -0.09
ARHGEF1-221ENST00000600387 CFHR4Q92496 578 aa14.46□□□□□ -0.09
ARHGEF1-221ENST00000600387 GTSF1LQ9H1H1 148 aa14.46□□□□□ -0.09
ARHGEF1-221ENST00000600387 DPM3Q9P2X0 92 aa14.46□□□□□ -0.09
ARHGEF1-221ENST00000600387 GAGE12HA6NDE8 117 aa14.46□□□□□ -0.09
ARHGEF1-221ENST00000600387 ZNF207O43670 478 aaKnown RBP14.46□□□□□ -0.09
ARHGEF1-221ENST00000600387 C5orf64Q2M2E5 130 aa14.46□□□□□ -0.09
ARHGEF1-221ENST00000600387 ZZEF1O43149 2961 aa14.45□□□□□ -0.1
ARHGEF1-221ENST00000600387 GATA1P15976 413 aaPredicted RBP14.45□□□□□ -0.1
ARHGEF1-221ENST00000600387 HLA-DMBP28068 263 aa14.45□□□□□ -0.1
ARHGEF1-221ENST00000600387 C12orf74Q32Q52 190 aa14.45□□□□□ -0.1
ARHGEF1-221ENST00000600387 MRPL35Q9NZE8 188 aaKnown RBP14.45□□□□□ -0.1
ARHGEF1-221ENST00000600387 ONECUT1Q9UBC0 465 aa14.45□□□□□ -0.1
ARHGEF1-221ENST00000600387 COLQQ9Y215 455 aaPredicted RBP14.45□□□□□ -0.1
ARHGEF1-221ENST00000600387 B9A039 149 aa14.45□□□□□ -0.1
ARHGEF1-221ENST00000600387 WFDC2Q14508 124 aa14.45□□□□□ -0.1
ARHGEF1-221ENST00000600387 LAGE3Q14657 143 aa14.45□□□□□ -0.1
ARHGEF1-221ENST00000600387 IGFL4Q6B9Z1 124 aa14.45□□□□□ -0.1
ARHGEF1-221ENST00000600387 TSSC4Q9Y5U2 329 aaPredicted RBP14.45□□□□□ -0.1
ARHGEF1-221ENST00000600387 A0A087WX48 190 aa14.44□□□□□ -0.1
ARHGEF1-221ENST00000600387 RBAKDNA6NC62 111 aa14.44□□□□□ -0.1
ARHGEF1-221ENST00000600387 ZNF672Q499Z4 452 aaPredicted RBP14.44□□□□□ -0.1
ARHGEF1-221ENST00000600387 CLEC2AQ6UVW9 174 aa14.44□□□□□ -0.1
ARHGEF1-221ENST00000600387 ARPC1AQ92747 370 aa14.44□□□□□ -0.1
ARHGEF1-221ENST00000600387 AGRNO00468 2067 aa14.44□□□□□ -0.1
ARHGEF1-221ENST00000600387 PLNP26678 52 aa14.44□□□□□ -0.1
ARHGEF1-221ENST00000600387 DYNAPQ8N1N2 210 aa14.44□□□□□ -0.1
ARHGEF1-221ENST00000600387 MAPKAPK5-AS1Q8N8E1 139 aa14.44□□□□□ -0.1
ARHGEF1-221ENST00000600387 SPATA25Q9BR10 227 aa14.44□□□□□ -0.1
ARHGEF1-221ENST00000600387 SMAGPQ0VAQ4 97 aa14.43□□□□□ -0.1
ARHGEF1-221ENST00000600387 OR11H6Q8NGC7 330 aa14.43□□□□□ -0.1
ARHGEF1-221ENST00000600387 ASPMQ8IZT6 3477 aa14.43□□□□□ -0.1
ARHGEF1-221ENST00000600387 NCBP2LA6PVI3 153 aaKnown RBP14.43□□□□□ -0.1
ARHGEF1-221ENST00000600387 NDUFS8O00217 210 aa14.43□□□□□ -0.1
ARHGEF1-221ENST00000600387 CTSGP08311 255 aa14.43□□□□□ -0.1
ARHGEF1-221ENST00000600387 HES1Q14469 280 aa14.43□□□□□ -0.1
ARHGEF1-221ENST00000600387 IL17RELQ6ZVW7 336 aa14.43□□□□□ -0.1
ARHGEF1-221ENST00000600387 ZNF502Q8TBZ5 544 aa14.43□□□□□ -0.1
ARHGEF1-221ENST00000600387 LYNX1G3V0Z9 82 aa14.42□□□□□ -0.1
ARHGEF1-221ENST00000600387 LINC01619G3V211 115 aa14.42□□□□□ -0.1
ARHGEF1-221ENST00000600387 IGHV3-23P01764 117 aa14.42□□□□□ -0.1
ARHGEF1-221ENST00000600387 LYNX1P0DP58 116 aa14.42□□□□□ -0.1
ARHGEF1-221ENST00000600387 PPIFP30405 207 aaKnown RBP14.42□□□□□ -0.1
ARHGEF1-221ENST00000600387 ERCC8Q13216 396 aa14.42□□□□□ -0.1
ARHGEF1-221ENST00000600387 HIST1H4GQ99525 98 aa14.42□□□□□ -0.1
ARHGEF1-221ENST00000600387 H3BMG7 143 aa14.41□□□□□ -0.1
ARHGEF1-221ENST00000600387 LY6G5BQ8NDX9 201 aa14.41□□□□□ -0.1
ARHGEF1-221ENST00000600387 BOD1L1Q8NFC6 3051 aa14.41□□□□□ -0.1
ARHGEF1-221ENST00000600387 RAB9AP51151 201 aa14.41□□□□□ -0.1
ARHGEF1-221ENST00000600387 NRACQ8N912 160 aa14.41□□□□□ -0.1
ARHGEF1-221ENST00000600387 RRN3P1Q2M238 152 aa14.4□□□□□ -0.1
ARHGEF1-221ENST00000600387 GAGE13Q4V321 117 aa14.4□□□□□ -0.1
ARHGEF1-221ENST00000600387 KALRNO60229 2985 aa14.4□□□□□ -0.1
ARHGEF1-221ENST00000600387 IGKV3D-20A0A0C4DH25 116 aa14.4□□□□□ -0.1
ARHGEF1-221ENST00000600387 A0A1B0GV72 72 aa14.4□□□□□ -0.1
ARHGEF1-221ENST00000600387 GOSR1O95249 250 aa14.4□□□□□ -0.1
ARHGEF1-221ENST00000600387 SPAG8Q99932 426 aaPredicted RBP14.4□□□□□ -0.1
ARHGEF1-221ENST00000600387 K7EMI3 77 aa14.39□□□□□ -0.11
ARHGEF1-221ENST00000600387 TRGV3P03979 118 aa14.39□□□□□ -0.11
ARHGEF1-221ENST00000600387 ETDBQ3ZM63 59 aa14.39□□□□□ -0.11
ARHGEF1-221ENST00000600387 SLC50A1Q9BRV3 221 aa14.39□□□□□ -0.11
ARHGEF1-221ENST00000600387 TRBV7-3A0A075B6L6 115 aa14.39□□□□□ -0.11
ARHGEF1-221ENST00000600387 TRAV12-1A0A0B4J245 112 aa14.39□□□□□ -0.11
ARHGEF1-221ENST00000600387 A0A1B0GWB2 263 aa14.39□□□□□ -0.11
ARHGEF1-221ENST00000600387 PRAC2D3DTV9 90 aa14.39□□□□□ -0.11
ARHGEF1-221ENST00000600387 NDPQ00604 133 aa14.39□□□□□ -0.11
ARHGEF1-221ENST00000600387 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP14.38□□□□□ -0.11
ARHGEF1-221ENST00000600387 SH2D6Q7Z4S9 175 aa14.38□□□□□ -0.11
ARHGEF1-221ENST00000600387 DEFB123Q8N688 67 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms