RNA–Protein interactions for RNA: ENST00000593008.1

DDX39A-220, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 538 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-220ENST00000593008 RGS13O14921 159 aa7.06□□□□□ -1.28
DDX39A-220ENST00000593008 IGLV2-11P01706 119 aa7.06□□□□□ -1.28
DDX39A-220ENST00000593008 RBMY1A1P0DJD3 496 aaKnown RBP7.06□□□□□ -1.28
DDX39A-220ENST00000593008 RBMY1CP0DJD4 496 aa7.06□□□□□ -1.28
DDX39A-220ENST00000593008 CT45A10P0DMU9 189 aa7.06□□□□□ -1.28
DDX39A-220ENST00000593008 RBMY1FQ15415 496 aaKnown RBP7.06□□□□□ -1.28
DDX39A-220ENST00000593008 CLLU1Q5K131 121 aa7.06□□□□□ -1.28
DDX39A-220ENST00000593008 LINC00322Q6ZN03 302 aaPredicted RBP7.06□□□□□ -1.28
DDX39A-220ENST00000593008 C5orf17Q8NAS9 161 aa7.06□□□□□ -1.28
DDX39A-220ENST00000593008 TVP23CQ96ET8 276 aa7.06□□□□□ -1.28
DDX39A-220ENST00000593008 SPATA25Q9BR10 227 aa7.06□□□□□ -1.28
DDX39A-220ENST00000593008 AGPAT4-IT1Q9H0P7 198 aa7.06□□□□□ -1.28
DDX39A-220ENST00000593008 EPDR1Q9UM22 224 aa7.06□□□□□ -1.28
DDX39A-220ENST00000593008 TRAV12-2A0A075B6T6 113 aa7.05□□□□□ -1.28
DDX39A-220ENST00000593008 F6UZH7 168 aa7.05□□□□□ -1.28
DDX39A-220ENST00000593008 SPINK13Q1W4C9 94 aa7.05□□□□□ -1.28
DDX39A-220ENST00000593008 STHQ8IWL8 128 aa7.05□□□□□ -1.28
DDX39A-220ENST00000593008 LYPD1Q8N2G4 141 aa7.05□□□□□ -1.28
DDX39A-220ENST00000593008 NHLRC2Q8NBF2 726 aa7.05□□□□□ -1.28
DDX39A-220ENST00000593008 CMTM2Q8TAZ6 248 aa7.05□□□□□ -1.28
DDX39A-220ENST00000593008 MRPL53Q96EL3 112 aaKnown RBP7.05□□□□□ -1.28
DDX39A-220ENST00000593008 MANBALQ9NQG1 85 aa7.05□□□□□ -1.28
DDX39A-220ENST00000593008 RBFOX3A6NFN3 312 aa7.04□□□□□ -1.28
DDX39A-220ENST00000593008 UBE2CO00762 179 aa7.04□□□□□ -1.28
DDX39A-220ENST00000593008 PRM2P04554 102 aa7.04□□□□□ -1.28
DDX39A-220ENST00000593008 APOC4P55056 127 aa7.04□□□□□ -1.28
DDX39A-220ENST00000593008 MEF2BQ02080 365 aaPredicted RBP7.04□□□□□ -1.28
DDX39A-220ENST00000593008 BTN1A1Q13410 526 aa7.04□□□□□ -1.28
DDX39A-220ENST00000593008 ZNF506Q5JVG8 444 aa7.04□□□□□ -1.28
DDX39A-220ENST00000593008 EBLN2Q6P2I7 272 aa7.04□□□□□ -1.28
DDX39A-220ENST00000593008 Q86TA4 180 aa7.04□□□□□ -1.28
DDX39A-220ENST00000593008 C2CD4CQ8TF44 421 aa7.04□□□□□ -1.28
DDX39A-220ENST00000593008 FAM210AQ96ND0 272 aa7.04□□□□□ -1.28
DDX39A-220ENST00000593008 C8orf49Q96NF6 230 aa7.04□□□□□ -1.28
DDX39A-220ENST00000593008 XCL2Q9UBD3 114 aa7.04□□□□□ -1.28
DDX39A-220ENST00000593008 PRELID1Q9Y255 219 aa7.04□□□□□ -1.28
DDX39A-220ENST00000593008 LOC102724200A0A096LPH7 203 aaPredicted RBP7.03□□□□□ -1.28
DDX39A-220ENST00000593008 RAB19A4D1S5 217 aa7.03□□□□□ -1.28
DDX39A-220ENST00000593008 PGPEP1LA6NFU8 196 aa7.03□□□□□ -1.28
DDX39A-220ENST00000593008 A8MTW9 85 aa7.03□□□□□ -1.28
DDX39A-220ENST00000593008 CRXO43186 299 aaPredicted RBP7.03□□□□□ -1.28
DDX39A-220ENST00000593008 CA1P00915 261 aaPredicted RBP7.03□□□□□ -1.28
DDX39A-220ENST00000593008 IFNA1P01562 189 aa7.03□□□□□ -1.28
DDX39A-220ENST00000593008 AKR1C3P42330 323 aa7.03□□□□□ -1.28
DDX39A-220ENST00000593008 CSN1S1P47710 185 aa7.03□□□□□ -1.28
DDX39A-220ENST00000593008 CEBPGP53567 150 aa7.03□□□□□ -1.28
DDX39A-220ENST00000593008 PRNTQ86SH4 94 aa7.03□□□□□ -1.28
DDX39A-220ENST00000593008 CYB561D1Q8N8Q1 229 aa7.03□□□□□ -1.28
DDX39A-220ENST00000593008 OR10J6PQ8NGY7 276 aa7.03□□□□□ -1.28
DDX39A-220ENST00000593008 FAM19A4Q96LR4 140 aa7.03□□□□□ -1.28
DDX39A-220ENST00000593008 ATG101Q9BSB4 218 aa7.03□□□□□ -1.28
DDX39A-220ENST00000593008 VAX2Q9UIW0 290 aa7.03□□□□□ -1.28
DDX39A-220ENST00000593008 ARL2-SNX15V9GYD0 113 aa7.03□□□□□ -1.28
DDX39A-220ENST00000593008 TRBV20OR9-2A0A075B6H5 130 aa7.02□□□□□ -1.29
DDX39A-220ENST00000593008 DUSP14O95147 198 aaKnown RBP7.02□□□□□ -1.29
DDX39A-220ENST00000593008 SRP19P09132 144 aaKnown RBP7.02□□□□□ -1.29
DDX39A-220ENST00000593008 RPL35P42766 123 aaKnown RBP7.02□□□□□ -1.29
DDX39A-220ENST00000593008 PPT1P50897 306 aa7.02□□□□□ -1.29
DDX39A-220ENST00000593008 ZNF80P51504 273 aaPredicted RBP7.02□□□□□ -1.29
DDX39A-220ENST00000593008 ZNF138P52744 262 aa7.02□□□□□ -1.29
DDX39A-220ENST00000593008 RAB14P61106 215 aa7.02□□□□□ -1.29
DDX39A-220ENST00000593008 DEFB135Q30KP9 77 aa7.02□□□□□ -1.29
DDX39A-220ENST00000593008 GFI1BQ5VTD9 330 aa7.02□□□□□ -1.29
DDX39A-220ENST00000593008 MORN3Q6PF18 240 aaPredicted RBP7.02□□□□□ -1.29
DDX39A-220ENST00000593008 C9orf47Q6ZRZ4 202 aa7.02□□□□□ -1.29
DDX39A-220ENST00000593008 ZFAND2AQ8N6M9 145 aa7.02□□□□□ -1.29
DDX39A-220ENST00000593008 MUC7Q8TAX7 377 aa7.02□□□□□ -1.29
DDX39A-220ENST00000593008 C11orf52Q96A22 123 aa7.02□□□□□ -1.29
DDX39A-220ENST00000593008 IGF2BP2-AS1Q96M15 143 aa7.02□□□□□ -1.29
DDX39A-220ENST00000593008 C1QTNF4Q9BXJ3 329 aa7.02□□□□□ -1.29
DDX39A-220ENST00000593008 EIF5A2Q9GZV4 153 aaKnown RBP7.02□□□□□ -1.29
DDX39A-220ENST00000593008 PPP1R14DQ9NXH3 145 aa7.02□□□□□ -1.29
DDX39A-220ENST00000593008 ZNF492Q9P255 531 aa7.02□□□□□ -1.29
DDX39A-220ENST00000593008 PSG8Q9UQ74 426 aa7.02□□□□□ -1.29
DDX39A-220ENST00000593008 DNAH7Q8WXX0 4024 aa7.01□□□□□ -1.29
DDX39A-220ENST00000593008 KIR2DL5BA0A0G2JN68 375 aa7.01□□□□□ -1.29
DDX39A-220ENST00000593008 KIR2DL5BA0A0G2JPC4 375 aa7.01□□□□□ -1.29
DDX39A-220ENST00000593008 FLI1Q01543 452 aaPredicted RBP7.01□□□□□ -1.29
DDX39A-220ENST00000593008 PMS2P11Q13670 270 aa7.01□□□□□ -1.29
DDX39A-220ENST00000593008 ZNF674Q2M3X9 581 aa7.01□□□□□ -1.29
DDX39A-220ENST00000593008 CENPWQ5EE01 88 aa7.01□□□□□ -1.29
DDX39A-220ENST00000593008 TMEM78Q5T7P6 136 aa7.01□□□□□ -1.29
DDX39A-220ENST00000593008 ZFAND6Q6FIF0 208 aa7.01□□□□□ -1.29
DDX39A-220ENST00000593008 COMMD7Q86VX2 200 aa7.01□□□□□ -1.29
DDX39A-220ENST00000593008 KIR2DL5AQ8N109 375 aa7.01□□□□□ -1.29
DDX39A-220ENST00000593008 TMEM75Q8N9X5 138 aa7.01□□□□□ -1.29
DDX39A-220ENST00000593008 KIR2DL5BQ8NHK3 375 aa7.01□□□□□ -1.29
DDX39A-220ENST00000593008 NKX6-2Q9C056 277 aaPredicted RBP7.01□□□□□ -1.29
DDX39A-220ENST00000593008 EDA2RQ9HAV5 297 aa7.01□□□□□ -1.29
DDX39A-220ENST00000593008 MED9Q9NWA0 146 aa7.01□□□□□ -1.29
DDX39A-220ENST00000593008 TRAV12-3A0A0B4J271 114 aa7□□□□□ -1.29
DDX39A-220ENST00000593008 RBAKDNA6NC62 111 aa7□□□□□ -1.29
DDX39A-220ENST00000593008 RNASE4P34096 147 aaKnown RBP7□□□□□ -1.29
DDX39A-220ENST00000593008 C1orf158Q8N1D5 194 aa7□□□□□ -1.29
DDX39A-220ENST00000593008 ARL6IP6Q8N6S5 226 aa7□□□□□ -1.29
DDX39A-220ENST00000593008 CSNK1G2-AS1Q8NCQ2 148 aa7□□□□□ -1.29
DDX39A-220ENST00000593008 HIST1H2BAQ96A08 127 aa7□□□□□ -1.29
DDX39A-220ENST00000593008 ZC2HC1AQ96GY0 325 aa7□□□□□ -1.29
DDX39A-220ENST00000593008 CSTL1Q9H114 145 aa7□□□□□ -1.29
DDX39A-220ENST00000593008 PARLQ9H300 379 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms