RNA–Protein interactions for RNA: ENST00000592012.5

MBD3-209, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 5

Gene MBD3, Length 2,379 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-209ENST00000592012 ERCC8Q13216 396 aa15.13■□□□□ 0.01
MBD3-209ENST00000592012 RNASEKQ6P5S7 137 aaKnown RBP15.13■□□□□ 0.01
MBD3-209ENST00000592012 KIR2DL5AQ8N109 375 aa15.13■□□□□ 0.01
MBD3-209ENST00000592012 USMG5Q96IX5 58 aa15.13■□□□□ 0.01
MBD3-209ENST00000592012 KLK15Q9H2R5 256 aa15.13■□□□□ 0.01
MBD3-209ENST00000592012 TRAV8-2A0A0B4J237 113 aa15.12■□□□□ 0.01
MBD3-209ENST00000592012 RBAKDNA6NC62 111 aa15.12■□□□□ 0.01
MBD3-209ENST00000592012 A1L4Q6 167 aa15.12■□□□□ 0.01
MBD3-209ENST00000592012 C3orf79P0CE67 100 aa15.12■□□□□ 0.01
MBD3-209ENST00000592012 BMI1P35226 326 aa15.12■□□□□ 0.01
MBD3-209ENST00000592012 LYZL1Q6UWQ5 148 aa15.12■□□□□ 0.01
MBD3-209ENST00000592012 ZNF575Q86XF7 245 aa15.12■□□□□ 0.01
MBD3-209ENST00000592012 UNQ9165/PRO28630Q6UXU0 137 aa15.11■□□□□ 0.01
MBD3-209ENST00000592012 C8orf86Q6ZUL3 223 aa15.11■□□□□ 0.01
MBD3-209ENST00000592012 NDUFAF3Q9BU61 184 aa15.11■□□□□ 0.01
MBD3-209ENST00000592012 BORCS7Q96B45 105 aa15.11■□□□□ 0.01
MBD3-209ENST00000592012 M0QZ24 198 aa15.1■□□□□ 0.01
MBD3-209ENST00000592012 M0R2Z0 102 aa15.1■□□□□ 0.01
MBD3-209ENST00000592012 KMT2BQ9UMN6 2715 aaPredicted RBP15.1■□□□□ 0.01
MBD3-209ENST00000592012 NDUFA4O00483 81 aa15.1■□□□□ 0.01
MBD3-209ENST00000592012 IGLV1-40P01703 118 aa15.1■□□□□ 0.01
MBD3-209ENST00000592012 GLMPQ8WWB7 406 aa15.1■□□□□ 0.01
MBD3-209ENST00000592012 CHD6Q8TD26 2715 aa15.09■□□□□ 0.01
MBD3-209ENST00000592012 IGHV3-11P01762 117 aa15.09■□□□□ 0.01
MBD3-209ENST00000592012 PF4V1P10720 104 aa15.09■□□□□ 0.01
MBD3-209ENST00000592012 ZNF493Q6ZR52 646 aa15.09■□□□□ 0.01
MBD3-209ENST00000592012 MRPL53Q96EL3 112 aaKnown RBP15.09■□□□□ 0.01
MBD3-209ENST00000592012 AGPAT4-IT1Q9H0P7 198 aa15.09■□□□□ 0.01
MBD3-209ENST00000592012 FAM181BA6NEQ2 426 aa15.08■□□□□ 0
MBD3-209ENST00000592012 FABP5P3A8MUU1 101 aa15.08■□□□□ 0
MBD3-209ENST00000592012 DEFB112Q30KQ8 113 aa15.08■□□□□ 0
MBD3-209ENST00000592012 MAPK1IP1LQ8NDC0 245 aa15.08■□□□□ 0
MBD3-209ENST00000592012 CHCHD1Q96BP2 118 aaKnown RBP15.08■□□□□ 0
MBD3-209ENST00000592012 PSMG3-AS1Q96PY0 264 aa15.08■□□□□ 0
MBD3-209ENST00000592012 ABCA12Q86UK0 2595 aa15.08■□□□□ 0
MBD3-209ENST00000592012 SMAD7O15105 426 aaKnown RBP15.07■□□□□ 0
MBD3-209ENST00000592012 LINC00614P0C842 121 aa15.07■□□□□ 0
MBD3-209ENST00000592012 RPS20P60866 119 aaKnown RBP15.07■□□□□ 0
MBD3-209ENST00000592012 SRSF2Q01130 221 aaKnown RBP15.07■□□□□ 0
MBD3-209ENST00000592012 CFHR3Q02985 330 aa15.07■□□□□ 0
MBD3-209ENST00000592012 LCNL1Q6ZST4 164 aa15.07■□□□□ 0
MBD3-209ENST00000592012 TGFAP01135 160 aa15.07■□□□□ 0
MBD3-209ENST00000592012 IL17RELQ6ZVW7 336 aa15.07■□□□□ 0
MBD3-209ENST00000592012 OR4X2Q8NGF9 303 aa15.07■□□□□ 0
MBD3-209ENST00000592012 C20orf144Q9BQM9 153 aa15.07■□□□□ 0
MBD3-209ENST00000592012 VAMP8Q9BV40 100 aa15.07■□□□□ 0
MBD3-209ENST00000592012 PAM16Q9Y3D7 125 aa15.07■□□□□ 0
MBD3-209ENST00000592012 TMEM213A2RRL7 107 aa15.06■□□□□ 0
MBD3-209ENST00000592012 IGHV4-59P01825 116 aa15.06■□□□□ 0
MBD3-209ENST00000592012 EBLN2Q6P2I7 272 aa15.06■□□□□ 0
MBD3-209ENST00000592012 J3QLI3 93 aa15.06■□□□□ 0
MBD3-209ENST00000592012 IGLC6P0CF74 106 aa15.06■□□□□ 0
MBD3-209ENST00000592012 SSTP61278 116 aa15.06■□□□□ 0
MBD3-209ENST00000592012 C2orf70A6NJV1 201 aa15.05■□□□□ 0
MBD3-209ENST00000592012 ORM1P02763 201 aa15.05■□□□□ 0
MBD3-209ENST00000592012 CTRLP40313 264 aa15.05■□□□□ 0
MBD3-209ENST00000592012 KRTAP10-9P60411 292 aa15.05■□□□□ 0
MBD3-209ENST00000592012 FER1L6-AS1Q8NA97 138 aa15.05■□□□□ 0
MBD3-209ENST00000592012 NAV2Q8IVL1 2488 aa15.05■□□□□ 0
MBD3-209ENST00000592012 A0A0G2JLM5 398 aa15.05■□□□□ -0
MBD3-209ENST00000592012 ZNF138P52744 262 aa15.05■□□□□ -0
MBD3-209ENST00000592012 PMCHL1Q16048 86 aa15.05■□□□□ -0
MBD3-209ENST00000592012 C16orf92Q96LL3 132 aa15.05■□□□□ -0
MBD3-209ENST00000592012 MUC21A0A0G2JKD1 596 aa15.04■□□□□ -0
MBD3-209ENST00000592012 MUC21A0A140T8X8 626 aa15.04■□□□□ -0
MBD3-209ENST00000592012 MUC21Q5SSG8 566 aa15.04■□□□□ -0
MBD3-209ENST00000592012 C9orf47Q6ZRZ4 202 aa15.04■□□□□ -0
MBD3-209ENST00000592012 CLEC5AQ9NY25 188 aa15.04■□□□□ -0
MBD3-209ENST00000592012 ZNF580Q9UK33 172 aa15.04■□□□□ -0
MBD3-209ENST00000592012 IGHV1-24A0A0C4DH33 117 aa15.04■□□□□ -0
MBD3-209ENST00000592012 LOXL1Q08397 574 aaPredicted RBP15.04■□□□□ -0
MBD3-209ENST00000592012 TMEM78Q5T7P6 136 aa15.04■□□□□ -0
MBD3-209ENST00000592012 DMRTA1Q5VZB9 504 aa15.04■□□□□ -0
MBD3-209ENST00000592012 GPHB5Q86YW7 130 aa15.04■□□□□ -0
MBD3-209ENST00000592012 RNF223E7ERA6 249 aa15.03■□□□□ -0
MBD3-209ENST00000592012 TMEM95Q3KNT9 176 aa15.03■□□□□ -0
MBD3-209ENST00000592012 LINC01559Q495D7 138 aa15.03■□□□□ -0
MBD3-209ENST00000592012 FAM104BQ5XKR9 115 aa15.03■□□□□ -0
MBD3-209ENST00000592012 NPFFR1Q9GZQ6 430 aa15.03■□□□□ -0
MBD3-209ENST00000592012 BTF3P20290 206 aaKnown RBP15.03■□□□□ -0
MBD3-209ENST00000592012 PPP1R14DQ9NXH3 145 aa15.03■□□□□ -0
MBD3-209ENST00000592012 MXRA5Q9NR99 2828 aa15.02■□□□□ -0
MBD3-209ENST00000592012 C9orf139Q6ZV77 190 aa15.02■□□□□ -0
MBD3-209ENST00000592012 C20orf173Q96LM9 149 aa15.02■□□□□ -0
MBD3-209ENST00000592012 AMN1Q8IY45 258 aa15.02□□□□□ -0.01
MBD3-209ENST00000592012 CSN3P07498 182 aa15.01□□□□□ -0.01
MBD3-209ENST00000592012 TWIST1Q15672 202 aa15.01□□□□□ -0.01
MBD3-209ENST00000592012 CNFNQ9BYD5 112 aa15.01□□□□□ -0.01
MBD3-209ENST00000592012 U3KQK5 164 aa15.01□□□□□ -0.01
MBD3-209ENST00000592012 NBPF19A0A087WUL8 3843 aa15.01□□□□□ -0.01
MBD3-209ENST00000592012 CR1P17927 2039 aa15□□□□□ -0.01
MBD3-209ENST00000592012 IGKV3D-20A0A0C4DH25 116 aa15□□□□□ -0.01
MBD3-209ENST00000592012 SOCS3O14543 225 aa15□□□□□ -0.01
MBD3-209ENST00000592012 PSMB8P28062 276 aa15□□□□□ -0.01
MBD3-209ENST00000592012 HIST1H1AQ02539 215 aaPredicted RBP15□□□□□ -0.01
MBD3-209ENST00000592012 MIEN1Q9BRT3 115 aa15□□□□□ -0.01
MBD3-209ENST00000592012 C11orf21Q9P2W6 132 aa15□□□□□ -0.01
MBD3-209ENST00000592012 D6R8Y8 96 aa14.99□□□□□ -0.01
MBD3-209ENST00000592012 RAB4AP20338 218 aa14.99□□□□□ -0.01
MBD3-209ENST00000592012 DOPEY2Q9Y3R5 2298 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 99 ms