RNA–Protein interactions for RNA: ENST00000578519.5

SKA2-204, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3

Gene SKA2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-204ENST00000578519 SRIP30626 198 aa8.48□□□□□ -1.05
SKA2-204ENST00000578519 KLF5Q13887 457 aaPredicted RBP8.48□□□□□ -1.05
SKA2-204ENST00000578519 IGFL4Q6B9Z1 124 aa8.48□□□□□ -1.05
SKA2-204ENST00000578519 IL17RELQ6ZVW7 336 aa8.48□□□□□ -1.05
SKA2-204ENST00000578519 SMIM15Q7Z3B0 74 aa8.48□□□□□ -1.05
SKA2-204ENST00000578519 RNF182Q8N6D2 247 aa8.48□□□□□ -1.05
SKA2-204ENST00000578519 KLHDC1Q8N7A1 406 aa8.48□□□□□ -1.05
SKA2-204ENST00000578519 FER1L6-AS1Q8NA97 138 aa8.48□□□□□ -1.05
SKA2-204ENST00000578519 GTSF1Q8WW33 167 aa8.48□□□□□ -1.05
SKA2-204ENST00000578519 SAMD10Q9BYL1 202 aa8.48□□□□□ -1.05
SKA2-204ENST00000578519 SPTAN1Q13813 2472 aaKnown RBP8.48□□□□□ -1.05
SKA2-204ENST00000578519 ABCA2Q9BZC7 2435 aa8.48□□□□□ -1.05
SKA2-204ENST00000578519 LINC01619G3V211 115 aa8.47□□□□□ -1.05
SKA2-204ENST00000578519 AMBPP02760 352 aa8.47□□□□□ -1.05
SKA2-204ENST00000578519 CRIP1P50238 77 aa8.47□□□□□ -1.05
SKA2-204ENST00000578519 ERCC8Q13216 396 aa8.47□□□□□ -1.05
SKA2-204ENST00000578519 LINC01559Q495D7 138 aa8.47□□□□□ -1.05
SKA2-204ENST00000578519 GFI1BQ5VTD9 330 aa8.47□□□□□ -1.05
SKA2-204ENST00000578519 LCNL1Q6ZST4 164 aa8.47□□□□□ -1.05
SKA2-204ENST00000578519 GATD1Q8NB37 220 aa8.47□□□□□ -1.05
SKA2-204ENST00000578519 C4orf3Q8WVX3 66 aa8.47□□□□□ -1.05
SKA2-204ENST00000578519 NIT2Q9NQR4 276 aa8.47□□□□□ -1.05
SKA2-204ENST00000578519 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.47□□□□□ -1.056e-8■■■□□ 16
SKA2-204ENST00000578519 KALRNO60229 2985 aa8.46□□□□□ -1.05
SKA2-204ENST00000578519 ABCA1O95477 2261 aa8.46□□□□□ -1.05
SKA2-204ENST00000578519 TRAV21A0A0B4J279 112 aa8.46□□□□□ -1.06
SKA2-204ENST00000578519 PRAC2D3DTV9 90 aa8.46□□□□□ -1.06
SKA2-204ENST00000578519 DUSP14O95147 198 aaKnown RBP8.46□□□□□ -1.06
SKA2-204ENST00000578519 PMCHP20382 165 aa8.46□□□□□ -1.06
SKA2-204ENST00000578519 KIAA1644Q3SXP7 199 aa8.46□□□□□ -1.06
SKA2-204ENST00000578519 HIST2H2BCQ6DN03 193 aa8.46□□□□□ -1.06
SKA2-204ENST00000578519 OR8A1Q8NGG7 326 aa8.46□□□□□ -1.06
SKA2-204ENST00000578519 TPPP3Q9BW30 176 aa8.46□□□□□ -1.06
SKA2-204ENST00000578519 TRAV2A0A0B4J234 112 aa8.45□□□□□ -1.06
SKA2-204ENST00000578519 GRIFINA4D1Z8 144 aa8.45□□□□□ -1.06
SKA2-204ENST00000578519 DNAJC9-AS1A6NH13 148 aa8.45□□□□□ -1.06
SKA2-204ENST00000578519 IFITM10A6NMD0 228 aa8.45□□□□□ -1.06
SKA2-204ENST00000578519 SOCS3O14543 225 aa8.45□□□□□ -1.06
SKA2-204ENST00000578519 GPX1P07203 203 aa8.45□□□□□ -1.06
SKA2-204ENST00000578519 GZMBP10144 247 aa8.45□□□□□ -1.06
SKA2-204ENST00000578519 HOXD3P31249 432 aaPredicted RBP8.45□□□□□ -1.06
SKA2-204ENST00000578519 CACNG7P62955 275 aa8.45□□□□□ -1.06
SKA2-204ENST00000578519 JOSD1Q15040 202 aaPredicted RBP8.45□□□□□ -1.06
SKA2-204ENST00000578519 IQCJQ1A5X6 159 aa8.45□□□□□ -1.06
SKA2-204ENST00000578519 EBLN2Q6P2I7 272 aa8.45□□□□□ -1.06
SKA2-204ENST00000578519 LYZL1Q6UWQ5 148 aa8.45□□□□□ -1.06
SKA2-204ENST00000578519 ZNF493Q6ZR52 646 aa8.45□□□□□ -1.06
SKA2-204ENST00000578519 Q8TAT8 98 aa8.45□□□□□ -1.06
SKA2-204ENST00000578519 ALKBH7Q9BT30 221 aaPredicted RBP8.45□□□□□ -1.06
SKA2-204ENST00000578519 CR1P17927 2039 aa8.44□□□□□ -1.06
SKA2-204ENST00000578519 USP9XQ93008 2570 aaPredicted RBP8.44□□□□□ -1.06
SKA2-204ENST00000578519 IGHV4OR15-8A0A075B7B6 117 aa8.44□□□□□ -1.06
SKA2-204ENST00000578519 A0A087WW49 117 aa8.44□□□□□ -1.06
SKA2-204ENST00000578519 TMSB15BA0A087X1C1 80 aa8.44□□□□□ -1.06
SKA2-204ENST00000578519 LOC102724200A0A096LPH7 203 aaPredicted RBP8.44□□□□□ -1.06
SKA2-204ENST00000578519 HSBP1O75506 76 aa8.44□□□□□ -1.06
SKA2-204ENST00000578519 SERF1AO75920 110 aa8.44□□□□□ -1.06
SKA2-204ENST00000578519 RNASE1P07998 156 aaKnown RBP8.44□□□□□ -1.06
SKA2-204ENST00000578519 SRD5A1P18405 259 aa8.44□□□□□ -1.06
SKA2-204ENST00000578519 TSPOP30536 169 aa8.44□□□□□ -1.06
SKA2-204ENST00000578519 CTRLP40313 264 aa8.44□□□□□ -1.06
SKA2-204ENST00000578519 LEPP41159 167 aa8.44□□□□□ -1.06
SKA2-204ENST00000578519 SYNJ2BPP57105 145 aa8.44□□□□□ -1.06
SKA2-204ENST00000578519 SLAQ13239 276 aa8.44□□□□□ -1.06
SKA2-204ENST00000578519 KHDC1LQ5JSQ8 128 aa8.44□□□□□ -1.06
SKA2-204ENST00000578519 TMEM256Q8N2U0 113 aa8.44□□□□□ -1.06
SKA2-204ENST00000578519 OR1N2Q8NGR9 330 aa8.44□□□□□ -1.06
SKA2-204ENST00000578519 CHCHD1Q96BP2 118 aaKnown RBP8.44□□□□□ -1.06
SKA2-204ENST00000578519 KCNS1Q96KK3 526 aa8.44□□□□□ -1.06
SKA2-204ENST00000578519 ODF3Q96PU9 254 aa8.44□□□□□ -1.06
SKA2-204ENST00000578519 C16orf95Q9H693 158 aa8.44□□□□□ -1.06
SKA2-204ENST00000578519 FAM208BQ5VWN6 2430 aa8.44□□□□□ -1.06
SKA2-204ENST00000578519 NBEAQ8NFP9 2946 aa8.43□□□□□ -1.06
SKA2-204ENST00000578519 RELNP78509 3460 aa8.43□□□□□ -1.06
SKA2-204ENST00000578519 TMEM213A2RRL7 107 aa8.43□□□□□ -1.06
SKA2-204ENST00000578519 C2orf70A6NJV1 201 aa8.43□□□□□ -1.06
SKA2-204ENST00000578519 PPBPP02775 128 aa8.43□□□□□ -1.06
SKA2-204ENST00000578519 ARMS2P0C7Q2 107 aa8.43□□□□□ -1.06
SKA2-204ENST00000578519 IGLC6P0CF74 106 aa8.43□□□□□ -1.06
SKA2-204ENST00000578519 TWIST1Q15672 202 aa8.43□□□□□ -1.06
SKA2-204ENST00000578519 LCE2CQ5TA81 110 aa8.43□□□□□ -1.06
SKA2-204ENST00000578519 Q6ZSV7 163 aa8.43□□□□□ -1.06
SKA2-204ENST00000578519 MS4A6AQ9H2W1 248 aa8.43□□□□□ -1.06
SKA2-204ENST00000578519 SPG11Q96JI7 2443 aa8.42□□□□□ -1.06
SKA2-204ENST00000578519 IGKV3-7A0A075B6H7 116 aa8.42□□□□□ -1.06
SKA2-204ENST00000578519 FRMD6-AS1P0C7T7 363 aa8.42□□□□□ -1.06
SKA2-204ENST00000578519 MED14OSP0DP75 135 aa8.42□□□□□ -1.06
SKA2-204ENST00000578519 AMTP48728 403 aa8.42□□□□□ -1.06
SKA2-204ENST00000578519 ZNF80P51504 273 aaPredicted RBP8.42□□□□□ -1.06
SKA2-204ENST00000578519 PYY3Q5JQD4 70 aa8.42□□□□□ -1.06
SKA2-204ENST00000578519 TCTEX1D4Q5JR98 221 aa8.42□□□□□ -1.06
SKA2-204ENST00000578519 GDF5OSQ5U4N7 250 aa8.42□□□□□ -1.06
SKA2-204ENST00000578519 C10orf99Q6UWK7 81 aa8.42□□□□□ -1.06
SKA2-204ENST00000578519 WFDC3Q8IUB2 231 aa8.42□□□□□ -1.06
SKA2-204ENST00000578519 C18orf32Q8TCD1 76 aa8.42□□□□□ -1.06
SKA2-204ENST00000578519 C20orf173Q96LM9 149 aa8.42□□□□□ -1.06
SKA2-204ENST00000578519 DUX5Q96PT3 197 aa8.42□□□□□ -1.06
SKA2-204ENST00000578519 SSBP4Q9BWG4 385 aaPredicted RBP8.42□□□□□ -1.06
SKA2-204ENST00000578519 LRBAP50851 2863 aa8.42□□□□□ -1.06
SKA2-204ENST00000578519 CFAP46Q8IYW2 2715 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms