RNA–Protein interactions for RNA: ENST00000577906.1

SNRPD1-202, Transcript of small nuclear ribonucleoprotein D1 polypeptide, humanhuman

TSL 2

Gene SNRPD1, Length 745 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD1-202ENST00000577906 PGRMC1O00264 195 aaKnown RBP0.69□□□□□ -2.3
SNRPD1-202ENST00000577906 IFNA21P01568 189 aa0.69□□□□□ -2.3
SNRPD1-202ENST00000577906 TPT1P13693 172 aaKnown RBP0.69□□□□□ -2.3
SNRPD1-202ENST00000577906 RPL7P18124 248 aaKnown RBP0.69□□□□□ -2.3
SNRPD1-202ENST00000577906 PDE6GP18545 87 aa0.69□□□□□ -2.3
SNRPD1-202ENST00000577906 POLR2HP52434 150 aaKnown RBP0.69□□□□□ -2.3
SNRPD1-202ENST00000577906 TEX29Q8N6K0 151 aa0.69□□□□□ -2.3
SNRPD1-202ENST00000577906 CLEC2BQ92478 149 aa0.69□□□□□ -2.3
SNRPD1-202ENST00000577906 TRAV13-1A0A0B4J241 112 aa0.68□□□□□ -2.3
SNRPD1-202ENST00000577906 C3orf85A0A1B0GTC6 90 aa0.68□□□□□ -2.3
SNRPD1-202ENST00000577906 ZNF727A8MUV8 499 aa0.68□□□□□ -2.3
SNRPD1-202ENST00000577906 H3BMG7 143 aa0.68□□□□□ -2.3
SNRPD1-202ENST00000577906 K7EIL1 84 aa0.68□□□□□ -2.3
SNRPD1-202ENST00000577906 MAXP61244 160 aa0.68□□□□□ -2.3
SNRPD1-202ENST00000577906 TFAMQ00059 246 aaKnown RBP0.68□□□□□ -2.3
SNRPD1-202ENST00000577906 NEDD8Q15843 81 aa0.68□□□□□ -2.3
SNRPD1-202ENST00000577906 CASC2Q6XLA1 102 aa0.68□□□□□ -2.3
SNRPD1-202ENST00000577906 OR5AK2Q8NH90 309 aa0.68□□□□□ -2.3
SNRPD1-202ENST00000577906 GRPEL2Q8TAA5 225 aa0.68□□□□□ -2.3
SNRPD1-202ENST00000577906 NABP2Q9BQ15 211 aa0.68□□□□□ -2.3
SNRPD1-202ENST00000577906 LXNQ9BS40 222 aa0.68□□□□□ -2.3
SNRPD1-202ENST00000577906 FKBP11Q9NYL4 201 aa0.68□□□□□ -2.3
SNRPD1-202ENST00000577906 TRAPPC2LQ9UL33 140 aa0.68□□□□□ -2.3
SNRPD1-202ENST00000577906 BOKQ9UMX3 212 aaPredicted RBP0.68□□□□□ -2.3
SNRPD1-202ENST00000577906 PIK3C2AO00443 1686 aa0.68□□□□□ -2.3
SNRPD1-202ENST00000577906 ADGBQ8N7X0 1667 aa0.68□□□□□ -2.3
SNRPD1-202ENST00000577906 TRBV30A0A0K0K1B3 111 aa0.67□□□□□ -2.3
SNRPD1-202ENST00000577906 FAM107AO95990 144 aa0.67□□□□□ -2.3
SNRPD1-202ENST00000577906 FOXA3P55318 350 aaPredicted RBP0.67□□□□□ -2.3
SNRPD1-202ENST00000577906 TMEM128Q5BJH2 165 aa0.67□□□□□ -2.3
SNRPD1-202ENST00000577906 MUC4Q99102 2169 aa0.67□□□□□ -2.3
SNRPD1-202ENST00000577906 TRBV7-6A0A0J9YX20 115 aa0.66□□□□□ -2.3
SNRPD1-202ENST00000577906 NUPR2A6NF83 97 aa0.66□□□□□ -2.3
SNRPD1-202ENST00000577906 C5orf17Q8NAS9 161 aa0.66□□□□□ -2.3
SNRPD1-202ENST00000577906 MORN4Q8NDC4 146 aa0.66□□□□□ -2.3
SNRPD1-202ENST00000577906 SELENOSQ9BQE4 189 aa0.66□□□□□ -2.3
SNRPD1-202ENST00000577906 IGHV3-30P01768 117 aa0.65□□□□□ -2.31
SNRPD1-202ENST00000577906 SAA1P0DJI8 122 aaPredicted RBP0.65□□□□□ -2.31
SNRPD1-202ENST00000577906 IGHV3-30-5P0DP03 117 aa0.65□□□□□ -2.31
SNRPD1-202ENST00000577906 SPINK9Q5DT21 86 aa0.65□□□□□ -2.31
SNRPD1-202ENST00000577906 TOMM20LQ6UXN7 152 aa0.65□□□□□ -2.31
SNRPD1-202ENST00000577906 IZUMO2Q6UXV1 221 aa0.65□□□□□ -2.31
SNRPD1-202ENST00000577906 Q6ZQY7 126 aa0.65□□□□□ -2.31
SNRPD1-202ENST00000577906 SREK1IP1Q8N9Q2 155 aaPredicted RBP0.65□□□□□ -2.31
SNRPD1-202ENST00000577906 OR9Q1Q8NGQ5 310 aa0.65□□□□□ -2.31
SNRPD1-202ENST00000577906 CIB3Q96Q77 187 aaPredicted RBP0.65□□□□□ -2.31
SNRPD1-202ENST00000577906 DDA1Q9BW61 102 aa0.65□□□□□ -2.31
SNRPD1-202ENST00000577906 C10orf95Q9H7T3 257 aa0.65□□□□□ -2.31
SNRPD1-202ENST00000577906 CBLN4Q9NTU7 201 aa0.65□□□□□ -2.31
SNRPD1-202ENST00000577906 ZGRF1Q86YA3 2104 aa0.65□□□□□ -2.31
SNRPD1-202ENST00000577906 ZNF462Q96JM2 2506 aa0.65□□□□□ -2.31
SNRPD1-202ENST00000577906 DLC1Q96QB1 1528 aa0.64□□□□□ -2.31
SNRPD1-202ENST00000577906 A0A0D9SG42 100 aa0.64□□□□□ -2.31
SNRPD1-202ENST00000577906 LOC107984156A0A0G2JMH3 177 aa0.64□□□□□ -2.31
SNRPD1-202ENST00000577906 LOC107984640A0A0U1RRK4 108 aa0.64□□□□□ -2.31
SNRPD1-202ENST00000577906 A6NN06 94 aa0.64□□□□□ -2.31
SNRPD1-202ENST00000577906 SLC25A4P12235 298 aa0.64□□□□□ -2.31
SNRPD1-202ENST00000577906 CRYGSP22914 178 aa0.64□□□□□ -2.31
SNRPD1-202ENST00000577906 RPS3P23396 243 aaKnown RBP eCLIP0.64□□□□□ -2.31
SNRPD1-202ENST00000577906 RPL37AP61513 92 aaKnown RBP0.64□□□□□ -2.31
SNRPD1-202ENST00000577906 SAMD13Q5VXD3 122 aa0.64□□□□□ -2.31
SNRPD1-202ENST00000577906 Q86TA4 180 aa0.64□□□□□ -2.31
SNRPD1-202ENST00000577906 ARL17AQ8IVW1 177 aa0.64□□□□□ -2.31
SNRPD1-202ENST00000577906 ATOH7Q8N100 152 aa0.64□□□□□ -2.31
SNRPD1-202ENST00000577906 TMEM229BQ8NBD8 167 aa0.64□□□□□ -2.31
SNRPD1-202ENST00000577906 CCDC115Q96NT0 180 aa0.64□□□□□ -2.31
SNRPD1-202ENST00000577906 CCL19Q99731 98 aa0.64□□□□□ -2.31
SNRPD1-202ENST00000577906 LPAR5Q9H1C0 372 aa0.64□□□□□ -2.31
SNRPD1-202ENST00000577906 TCOF1Q13428 1488 aaKnown RBP0.64□□□□□ -2.31
SNRPD1-202ENST00000577906 FANCMQ8IYD8 2048 aa0.64□□□□□ -2.31
SNRPD1-202ENST00000577906 FAM135BQ49AJ0 1406 aa0.64□□□□□ -2.31
SNRPD1-202ENST00000577906 CSAG1Q6PB30 78 aa0.63□□□□□ -2.31
SNRPD1-202ENST00000577906 SPATA8Q6RVD6 105 aa0.63□□□□□ -2.31
SNRPD1-202ENST00000577906 SMIM15Q7Z3B0 74 aa0.63□□□□□ -2.31
SNRPD1-202ENST00000577906 C10orf111Q8N326 155 aa0.63□□□□□ -2.31
SNRPD1-202ENST00000577906 MPC1Q9Y5U8 109 aa0.63□□□□□ -2.31
SNRPD1-202ENST00000577906 ZCCHC11Q5TAX3 1644 aaKnown RBP0.63□□□□□ -2.31
SNRPD1-202ENST00000577906 PBRM1Q86U86 1689 aa0.62□□□□□ -2.31
SNRPD1-202ENST00000577906 TRAV16A0A0A6YYK6 109 aaPredicted RBP0.62□□□□□ -2.31
SNRPD1-202ENST00000577906 LOC107986453A0A1B0GWG9 222 aa0.62□□□□□ -2.31
SNRPD1-202ENST00000577906 PRORSD1PA6NEY8 169 aa0.62□□□□□ -2.31
SNRPD1-202ENST00000577906 M0QZK8 103 aa0.62□□□□□ -2.31
SNRPD1-202ENST00000577906 S100GP29377 79 aa0.62□□□□□ -2.31
SNRPD1-202ENST00000577906 SRP9P49458 86 aaKnown RBP0.62□□□□□ -2.31
SNRPD1-202ENST00000577906 BLCAPP62952 87 aa0.62□□□□□ -2.31
SNRPD1-202ENST00000577906 TCTEX1D1Q8N7M0 179 aa0.62□□□□□ -2.31
SNRPD1-202ENST00000577906 OR51A4Q8NGJ6 313 aa0.62□□□□□ -2.31
SNRPD1-202ENST00000577906 NAT14Q8WUY8 206 aa0.62□□□□□ -2.31
SNRPD1-202ENST00000577906 PLAC4Q8WY50 150 aa0.62□□□□□ -2.31
SNRPD1-202ENST00000577906 NDUFAF1Q9Y375 327 aa0.62□□□□□ -2.31
SNRPD1-202ENST00000577906 ZDBF2Q9HCK1 2354 aa0.62□□□□□ -2.31
SNRPD1-202ENST00000577906 A0A1W2PPB8 328 aa0.61□□□□□ -2.31
SNRPD1-202ENST00000577906 A0A1W2PRS3 328 aa0.61□□□□□ -2.31
SNRPD1-202ENST00000577906 KIR3DP1A8MWS1 328 aa0.61□□□□□ -2.31
SNRPD1-202ENST00000577906 SULT1C4O75897 302 aa0.61□□□□□ -2.31
SNRPD1-202ENST00000577906 RPL22P35268 128 aaKnown RBP0.61□□□□□ -2.31
SNRPD1-202ENST00000577906 QRFPP83859 136 aa0.61□□□□□ -2.31
SNRPD1-202ENST00000577906 TMEM35BQ8NCS4 154 aa0.61□□□□□ -2.31
SNRPD1-202ENST00000577906 BRK1Q8WUW1 75 aa0.61□□□□□ -2.31
SNRPD1-202ENST00000577906 FGD6Q6ZV73 1430 aa0.61□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms