RNA–Protein interactions for RNA: ENST00000577300.1

SMCHD1-202, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 506 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-202ENST00000577300 CDK5R1Q15078 307 aa2.09□□□□□ -2.07
SMCHD1-202ENST00000577300 LGALS9CQ6DKI2 356 aa2.09□□□□□ -2.07
SMCHD1-202ENST00000577300 CLEC19AQ6UXS0 136 aa2.09□□□□□ -2.07
SMCHD1-202ENST00000577300 SMIM5Q71RC9 77 aa2.09□□□□□ -2.07
SMCHD1-202ENST00000577300 PRNTQ86SH4 94 aa2.09□□□□□ -2.07
SMCHD1-202ENST00000577300 BPIFA4PQ86YQ2 179 aa2.09□□□□□ -2.07
SMCHD1-202ENST00000577300 C15orf53Q8NAA6 179 aa2.09□□□□□ -2.07
SMCHD1-202ENST00000577300 NPBQ8NG41 125 aa2.09□□□□□ -2.07
SMCHD1-202ENST00000577300 OR8A1Q8NGG7 326 aa2.09□□□□□ -2.07
SMCHD1-202ENST00000577300 AQP3Q92482 292 aa2.09□□□□□ -2.07
SMCHD1-202ENST00000577300 RAB37Q96AX2 223 aa2.09□□□□□ -2.07
SMCHD1-202ENST00000577300 PGLYRP4Q96LB8 373 aa2.09□□□□□ -2.07
SMCHD1-202ENST00000577300 OR8B2Q96RD0 313 aa2.09□□□□□ -2.07
SMCHD1-202ENST00000577300 IMUPQ9GZP8 106 aa2.09□□□□□ -2.07
SMCHD1-202ENST00000577300 CST11Q9H112 138 aa2.09□□□□□ -2.07
SMCHD1-202ENST00000577300 CYSTM1Q9H1C7 97 aa2.09□□□□□ -2.07
SMCHD1-202ENST00000577300 FAM60AQ9NP50 221 aa2.09□□□□□ -2.07
SMCHD1-202ENST00000577300 LINC00588Q9Y4M8 146 aa2.09□□□□□ -2.07
SMCHD1-202ENST00000577300 CHD2O14647 1828 aaKnown RBP2.09□□□□□ -2.08
SMCHD1-202ENST00000577300 RIMBP3CA6NJZ7 1639 aa2.09□□□□□ -2.08
SMCHD1-202ENST00000577300 RIMBP3BA6NNM3 1639 aa2.09□□□□□ -2.08
SMCHD1-202ENST00000577300 SUPT6HQ7KZ85 1726 aaKnown RBP2.08□□□□□ -2.08
SMCHD1-202ENST00000577300 SHANK3Q9BYB0 1731 aa2.08□□□□□ -2.08
SMCHD1-202ENST00000577300 MARF1Q9Y4F3 1742 aaKnown RBP2.08□□□□□ -2.08
SMCHD1-202ENST00000577300 PIKFYVEQ9Y2I7 2098 aa2.08□□□□□ -2.08
SMCHD1-202ENST00000577300 SBF2Q86WG5 1849 aa2.08□□□□□ -2.08
SMCHD1-202ENST00000577300 TRPM2O94759 1503 aa2.08□□□□□ -2.08
SMCHD1-202ENST00000577300 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP2.08□□□□□ -2.08
SMCHD1-202ENST00000577300 COL27A1Q8IZC6 1860 aaPredicted RBP2.08□□□□□ -2.08
SMCHD1-202ENST00000577300 ARHGEF5Q12774 1597 aa2.08□□□□□ -2.08
SMCHD1-202ENST00000577300 MROH2BQ7Z745 1585 aa2.08□□□□□ -2.08
SMCHD1-202ENST00000577300 A0A0D9SFI3 127 aa2.08□□□□□ -2.08
SMCHD1-202ENST00000577300 MDFIC2A0A1B0GVS7 189 aa2.08□□□□□ -2.08
SMCHD1-202ENST00000577300 FAM24AA6NFZ4 105 aa2.08□□□□□ -2.08
SMCHD1-202ENST00000577300 IGLL5B9A064 214 aa2.08□□□□□ -2.08
SMCHD1-202ENST00000577300 LST1O00453 97 aa2.08□□□□□ -2.08
SMCHD1-202ENST00000577300 ANGPTL7O43827 346 aa2.08□□□□□ -2.08
SMCHD1-202ENST00000577300 ZNF73O43830 326 aaPredicted RBP2.08□□□□□ -2.08
SMCHD1-202ENST00000577300 GYPBP06028 91 aa2.08□□□□□ -2.08
SMCHD1-202ENST00000577300 CISD3P0C7P0 127 aa2.08□□□□□ -2.08
SMCHD1-202ENST00000577300 CHTF8P0CG12 524 aa2.08□□□□□ -2.08
SMCHD1-202ENST00000577300 COX8AP10176 69 aa2.08□□□□□ -2.08
SMCHD1-202ENST00000577300 SSR2P43308 183 aa2.08□□□□□ -2.08
SMCHD1-202ENST00000577300 CSN1S1P47710 185 aa2.08□□□□□ -2.08
SMCHD1-202ENST00000577300 DAPP51397 102 aa2.08□□□□□ -2.08
SMCHD1-202ENST00000577300 DSCR4P56555 118 aaPredicted RBP2.08□□□□□ -2.08
SMCHD1-202ENST00000577300 MTPNP58546 118 aa2.08□□□□□ -2.08
SMCHD1-202ENST00000577300 LINC00313P59037 77 aa2.08□□□□□ -2.08
SMCHD1-202ENST00000577300 UBE2G1P62253 170 aa2.08□□□□□ -2.08
SMCHD1-202ENST00000577300 SNRPD3P62318 126 aaKnown RBP2.08□□□□□ -2.08
SMCHD1-202ENST00000577300 SS18Q15532 418 aa2.08□□□□□ -2.08
SMCHD1-202ENST00000577300 NSUN5P1Q3KNT7 163 aa2.08□□□□□ -2.08
SMCHD1-202ENST00000577300 ORMDL2Q53FV1 153 aa2.08□□□□□ -2.08
SMCHD1-202ENST00000577300 PRR9Q5T870 116 aa2.08□□□□□ -2.08
SMCHD1-202ENST00000577300 CFAP126Q5VTH2 177 aa2.08□□□□□ -2.08
SMCHD1-202ENST00000577300 MIC13Q5XKP0 118 aa2.08□□□□□ -2.08
SMCHD1-202ENST00000577300 SCGB1D4Q6XE38 83 aa2.08□□□□□ -2.08
SMCHD1-202ENST00000577300 ZCCHC23Q6ZST2 131 aa2.08□□□□□ -2.08
SMCHD1-202ENST00000577300 LCA10Q71F78 164 aa2.08□□□□□ -2.08
SMCHD1-202ENST00000577300 AMN1Q8IY45 258 aa2.08□□□□□ -2.08
SMCHD1-202ENST00000577300 Q8N2B8 174 aa2.08□□□□□ -2.08
SMCHD1-202ENST00000577300 DRAM1Q8N682 238 aa2.08□□□□□ -2.08
SMCHD1-202ENST00000577300 C11orf72Q8NBR9 251 aa2.08□□□□□ -2.08
SMCHD1-202ENST00000577300 APCDD1LQ8NCL9 501 aa2.08□□□□□ -2.08
SMCHD1-202ENST00000577300 MYOZ3Q8TDC0 251 aa2.08□□□□□ -2.08
SMCHD1-202ENST00000577300 FGF13Q92913 245 aa2.08□□□□□ -2.08
SMCHD1-202ENST00000577300 RMI2Q96E14 147 aa2.08□□□□□ -2.08
SMCHD1-202ENST00000577300 HIGD1BQ9P298 99 aa2.08□□□□□ -2.08
SMCHD1-202ENST00000577300 TRAPPC1Q9Y5R8 145 aa2.08□□□□□ -2.08
SMCHD1-202ENST00000577300 V9GY05 133 aa2.08□□□□□ -2.08
SMCHD1-202ENST00000577300 MYO3AQ8NEV4 1616 aa2.08□□□□□ -2.08
SMCHD1-202ENST00000577300 E9PCH4 1651 aa2.08□□□□□ -2.08
SMCHD1-202ENST00000577300 XRN1Q8IZH2 1706 aaKnown RBP2.08□□□□□ -2.08
SMCHD1-202ENST00000577300 TNKS1BP1Q9C0C2 1729 aaKnown RBP2.08□□□□□ -2.08
SMCHD1-202ENST00000577300 NUP214P35658 2090 aaPredicted RBP2.08□□□□□ -2.08
SMCHD1-202ENST00000577300 ANKRD36CQ5JPF3 1778 aa2.08□□□□□ -2.08
SMCHD1-202ENST00000577300 C10orf71Q711Q0 1435 aa2.08□□□□□ -2.08
SMCHD1-202ENST00000577300 PXDNLA1KZ92 1463 aa2.07□□□□□ -2.08
SMCHD1-202ENST00000577300 NUP210Q8TEM1 1887 aaPredicted RBP2.07□□□□□ -2.08
SMCHD1-202ENST00000577300 TIAM1Q13009 1591 aa2.07□□□□□ -2.08
SMCHD1-202ENST00000577300 USP54Q70EL1 1684 aa2.07□□□□□ -2.08
SMCHD1-202ENST00000577300 TRAV8-3A0A0A6YYJ7 113 aa2.07□□□□□ -2.08
SMCHD1-202ENST00000577300 TRBV27A0A0K0K1C4 114 aa2.07□□□□□ -2.08
SMCHD1-202ENST00000577300 M0R381 172 aa2.07□□□□□ -2.08
SMCHD1-202ENST00000577300 NDUFB2O95178 105 aa2.07□□□□□ -2.08
SMCHD1-202ENST00000577300 FSTL3O95633 263 aa2.07□□□□□ -2.08
SMCHD1-202ENST00000577300 C1QAP02745 245 aa2.07□□□□□ -2.08
SMCHD1-202ENST00000577300 ASAH2BP0C7U1 165 aa2.07□□□□□ -2.08
SMCHD1-202ENST00000577300 PIPP12273 146 aaPredicted RBP2.07□□□□□ -2.08
SMCHD1-202ENST00000577300 CXCL5P42830 114 aa2.07□□□□□ -2.08
SMCHD1-202ENST00000577300 MP68P56378 58 aa2.07□□□□□ -2.08
SMCHD1-202ENST00000577300 ZNF816Q0VGE8 651 aaPredicted RBP2.07□□□□□ -2.08
SMCHD1-202ENST00000577300 FAM78AQ5JUQ0 283 aa2.07□□□□□ -2.08
SMCHD1-202ENST00000577300 LINC01545Q5VT33 79 aa2.07□□□□□ -2.08
SMCHD1-202ENST00000577300 CEMP1Q6PRD7 247 aaPredicted RBP2.07□□□□□ -2.08
SMCHD1-202ENST00000577300 TMEM136Q6ZRR5 245 aa2.07□□□□□ -2.08
SMCHD1-202ENST00000577300 PHF5AQ7RTV0 110 aaKnown RBP2.07□□□□□ -2.08
SMCHD1-202ENST00000577300 CAMK2N1Q7Z7J9 78 aa2.07□□□□□ -2.08
SMCHD1-202ENST00000577300 FAM57AQ8TBR7 257 aa2.07□□□□□ -2.08
SMCHD1-202ENST00000577300 LRRC29Q8WV35 223 aa2.07□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms