RNA–Protein interactions for RNA: ENST00000574755.5

VPS33B-208, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 2,356 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-208ENST00000574755 BMI1P35226 326 aa10.77□□□□□ -0.69
VPS33B-208ENST00000574755 RIGQ13278 110 aa10.77□□□□□ -0.69
VPS33B-208ENST00000574755 Q5PR19 223 aa10.77□□□□□ -0.69
VPS33B-208ENST00000574755 ZNF664Q8N3J9 261 aa10.77□□□□□ -0.69
VPS33B-208ENST00000574755 TRAV8-2A0A0B4J237 113 aa10.76□□□□□ -0.69
VPS33B-208ENST00000574755 RBAKDNA6NC62 111 aa10.76□□□□□ -0.69
VPS33B-208ENST00000574755 IGHV4-31P0DP07 118 aa10.76□□□□□ -0.69
VPS33B-208ENST00000574755 ZNF80P51504 273 aaPredicted RBP10.76□□□□□ -0.69
VPS33B-208ENST00000574755 FAM19A2Q8N3H0 131 aa10.76□□□□□ -0.69
VPS33B-208ENST00000574755 GLMPQ8WWB7 406 aa10.76□□□□□ -0.69
VPS33B-208ENST00000574755 NAV2Q8IVL1 2488 aa10.76□□□□□ -0.69
VPS33B-208ENST00000574755 LOC102724200A0A096LPH7 203 aaPredicted RBP10.76□□□□□ -0.69
VPS33B-208ENST00000574755 HSBP1O75506 76 aa10.76□□□□□ -0.69
VPS33B-208ENST00000574755 ZNF705DP0CH99 300 aaPredicted RBP10.76□□□□□ -0.69
VPS33B-208ENST00000574755 ZNF705BP0CI00 300 aaPredicted RBP10.76□□□□□ -0.69
VPS33B-208ENST00000574755 NTF3P20783 257 aa10.76□□□□□ -0.69
VPS33B-208ENST00000574755 CFHR3Q02985 330 aa10.76□□□□□ -0.69
VPS33B-208ENST00000574755 NRN1Q9NPD7 142 aa10.76□□□□□ -0.69
VPS33B-208ENST00000574755 SMAD7O15105 426 aaKnown RBP10.75□□□□□ -0.69
VPS33B-208ENST00000574755 RNASEKQ6P5S7 137 aaKnown RBP10.75□□□□□ -0.69
VPS33B-208ENST00000574755 C16orf92Q96LL3 132 aa10.75□□□□□ -0.69
VPS33B-208ENST00000574755 NPFFR1Q9GZQ6 430 aa10.75□□□□□ -0.69
VPS33B-208ENST00000574755 A0A1B0GW15 77 aa10.75□□□□□ -0.69
VPS33B-208ENST00000574755 KRTDAPP60985 99 aa10.75□□□□□ -0.69
VPS33B-208ENST00000574755 LYZL1Q6UWQ5 148 aa10.75□□□□□ -0.69
VPS33B-208ENST00000574755 LRRC75A-AS1Q8N1F1 130 aa10.75□□□□□ -0.69
VPS33B-208ENST00000574755 MRPL53Q96EL3 112 aaKnown RBP10.75□□□□□ -0.69
VPS33B-208ENST00000574755 SSTP61278 116 aa10.74□□□□□ -0.69
VPS33B-208ENST00000574755 FAM209BQ5JX69 171 aa10.74□□□□□ -0.69
VPS33B-208ENST00000574755 IL17RELQ6ZVW7 336 aa10.74□□□□□ -0.69
VPS33B-208ENST00000574755 FABP5P3A8MUU1 101 aa10.74□□□□□ -0.69
VPS33B-208ENST00000574755 DDTP30046 118 aa10.74□□□□□ -0.69
VPS33B-208ENST00000574755 TMEM78Q5T7P6 136 aa10.74□□□□□ -0.69
VPS33B-208ENST00000574755 ZNF580Q9UK33 172 aa10.74□□□□□ -0.69
VPS33B-208ENST00000574755 RNF114Q9Y508 228 aa10.74□□□□□ -0.69
VPS33B-208ENST00000574755 ORM1P02763 201 aa10.73□□□□□ -0.69
VPS33B-208ENST00000574755 C9orf139Q6ZV77 190 aa10.73□□□□□ -0.69
VPS33B-208ENST00000574755 Q96MF0 132 aa10.73□□□□□ -0.69
VPS33B-208ENST00000574755 AGPAT4-IT1Q9H0P7 198 aa10.73□□□□□ -0.69
VPS33B-208ENST00000574755 PSMB8P28062 276 aa10.73□□□□□ -0.69
VPS33B-208ENST00000574755 RPS20P60866 119 aaKnown RBP10.73□□□□□ -0.69
VPS33B-208ENST00000574755 NIT1Q86X76 327 aa10.73□□□□□ -0.69
VPS33B-208ENST00000574755 CLEC5AQ9NY25 188 aa10.73□□□□□ -0.69
VPS33B-208ENST00000574755 VPREB3Q9UKI3 123 aa10.73□□□□□ -0.69
VPS33B-208ENST00000574755 APCP25054 2843 aa10.72□□□□□ -0.69
VPS33B-208ENST00000574755 FSHBP01225 129 aa10.72□□□□□ -0.69
VPS33B-208ENST00000574755 RPL11P62913 178 aaKnown RBP10.72□□□□□ -0.69
VPS33B-208ENST00000574755 DEFA6Q01524 100 aa10.72□□□□□ -0.69
VPS33B-208ENST00000574755 PEF1Q9UBV8 284 aaKnown RBP10.72□□□□□ -0.69
VPS33B-208ENST00000574755 M0QZ24 198 aa10.72□□□□□ -0.69
VPS33B-208ENST00000574755 M0R2Z0 102 aa10.72□□□□□ -0.69
VPS33B-208ENST00000574755 ZNF138P52744 262 aa10.72□□□□□ -0.69
VPS33B-208ENST00000574755 CTAG1AP78358 180 aa10.72□□□□□ -0.69
VPS33B-208ENST00000574755 FER1L6-AS1Q8NA97 138 aa10.72□□□□□ -0.69
VPS33B-208ENST00000574755 GATD1Q8NB37 220 aa10.72□□□□□ -0.69
VPS33B-208ENST00000574755 MXRA5Q9NR99 2828 aa10.71□□□□□ -0.69
VPS33B-208ENST00000574755 MUC21A0A0G2JKD1 596 aa10.71□□□□□ -0.69
VPS33B-208ENST00000574755 MUC21A0A140T8X8 626 aa10.71□□□□□ -0.69
VPS33B-208ENST00000574755 TM4SF20Q53R12 229 aa10.71□□□□□ -0.69
VPS33B-208ENST00000574755 MUC21Q5SSG8 566 aa10.71□□□□□ -0.69
VPS33B-208ENST00000574755 C10orf99Q6UWK7 81 aa10.71□□□□□ -0.69
VPS33B-208ENST00000574755 Q6YL49 198 aa10.71□□□□□ -0.69
VPS33B-208ENST00000574755 ZNF738Q8NE65 137 aa10.71□□□□□ -0.69
VPS33B-208ENST00000574755 URB1-AS1Q96HZ7 61 aa10.71□□□□□ -0.69
VPS33B-208ENST00000574755 DAZ1Q9NQZ3 744 aaKnown RBP10.71□□□□□ -0.69
VPS33B-208ENST00000574755 CREBBPQ92793 2442 aa10.71□□□□□ -0.7
VPS33B-208ENST00000574755 CHD6Q8TD26 2715 aa10.71□□□□□ -0.7
VPS33B-208ENST00000574755 TEX15Q9BXT5 2789 aa10.7□□□□□ -0.7
VPS33B-208ENST00000574755 TMEM213A2RRL7 107 aa10.7□□□□□ -0.7
VPS33B-208ENST00000574755 SRSF2Q01130 221 aaKnown RBP10.7□□□□□ -0.7
VPS33B-208ENST00000574755 C9orf47Q6ZRZ4 202 aa10.7□□□□□ -0.7
VPS33B-208ENST00000574755 GPHB5Q86YW7 130 aa10.7□□□□□ -0.7
VPS33B-208ENST00000574755 ZNF493Q6ZR52 646 aa10.7□□□□□ -0.7
VPS33B-208ENST00000574755 C20orf173Q96LM9 149 aa10.7□□□□□ -0.7
VPS33B-208ENST00000574755 RHPN1-AS1Q9BWJ2 59 aa10.7□□□□□ -0.7
VPS33B-208ENST00000574755 PRRC2AP48634 2157 aaKnown RBP10.7□□□□□ -0.7
VPS33B-208ENST00000574755 IGKV3-7A0A075B6H7 116 aa10.69□□□□□ -0.7
VPS33B-208ENST00000574755 IGHV7-4-1A0A0J9YVY3 117 aa10.69□□□□□ -0.7
VPS33B-208ENST00000574755 C3orf79P0CE67 100 aa10.69□□□□□ -0.7
VPS33B-208ENST00000574755 IGLC6P0CF74 106 aa10.69□□□□□ -0.7
VPS33B-208ENST00000574755 CTRLP40313 264 aa10.69□□□□□ -0.7
VPS33B-208ENST00000574755 TEX43Q6ZNM6 134 aa10.69□□□□□ -0.7
VPS33B-208ENST00000574755 TENM4Q6N022 2769 aa10.69□□□□□ -0.7
VPS33B-208ENST00000574755 HOXA3O43365 443 aaPredicted RBP10.69□□□□□ -0.7
VPS33B-208ENST00000574755 LINC00614P0C842 121 aa10.69□□□□□ -0.7
VPS33B-208ENST00000574755 TWIST1Q15672 202 aa10.69□□□□□ -0.7
VPS33B-208ENST00000574755 LINC01559Q495D7 138 aa10.69□□□□□ -0.7
VPS33B-208ENST00000574755 FAM106AQ4KMX7 169 aa10.69□□□□□ -0.7
VPS33B-208ENST00000574755 ZNF575Q86XF7 245 aa10.69□□□□□ -0.7
VPS33B-208ENST00000574755 CHCHD1Q96BP2 118 aaKnown RBP10.69□□□□□ -0.7
VPS33B-208ENST00000574755 PMCHL1Q16048 86 aa10.68□□□□□ -0.7
VPS33B-208ENST00000574755 NBPF19A0A087WUL8 3843 aa10.68□□□□□ -0.7
VPS33B-208ENST00000574755 FAM181BA6NEQ2 426 aa10.68□□□□□ -0.7
VPS33B-208ENST00000574755 SOCS3O14543 225 aa10.68□□□□□ -0.7
VPS33B-208ENST00000574755 CSN3P07498 182 aa10.68□□□□□ -0.7
VPS33B-208ENST00000574755 HIST1H1AQ02539 215 aaPredicted RBP10.68□□□□□ -0.7
VPS33B-208ENST00000574755 TDRG1Q3Y452 100 aa10.68□□□□□ -0.7
VPS33B-208ENST00000574755 CYB5R2Q6BCY4 276 aa10.68□□□□□ -0.7
VPS33B-208ENST00000574755 AMN1Q8IY45 258 aa10.68□□□□□ -0.7
VPS33B-208ENST00000574755 SELENOKQ9Y6D0 94 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms