RNA–Protein interactions for RNA: ENST00000569764.1

SMG1-217, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 4,187 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-217ENST00000569764 Q6ZUT4 128 aa5.25□□□□□ -1.57
SMG1-217ENST00000569764 CIARTQ8N365 385 aaPredicted RBP5.25□□□□□ -1.57
SMG1-217ENST00000569764 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.25□□□□□ -1.57
SMG1-217ENST00000569764 HECTD1Q9ULT8 2610 aa5.25□□□□□ -1.57
SMG1-217ENST00000569764 IGKV1-27A0A075B6S5 117 aa5.25□□□□□ -1.57
SMG1-217ENST00000569764 SNRPGP15A8MWD9 76 aa5.25□□□□□ -1.57
SMG1-217ENST00000569764 SNCGO76070 127 aa5.25□□□□□ -1.57
SMG1-217ENST00000569764 COL10A1Q03692 680 aa5.25□□□□□ -1.57
SMG1-217ENST00000569764 GAGE2AQ6NT46 116 aa5.25□□□□□ -1.57
SMG1-217ENST00000569764 SLC25A21Q9BQT8 299 aaPredicted RBP5.25□□□□□ -1.57
SMG1-217ENST00000569764 C11orf68Q9H3H3 251 aaKnown RBP5.25□□□□□ -1.57
SMG1-217ENST00000569764 PLEKHA3Q9HB20 300 aa5.25□□□□□ -1.57
SMG1-217ENST00000569764 DNAJC9-AS1A6NH13 148 aa5.24□□□□□ -1.57
SMG1-217ENST00000569764 H0YJW9 148 aa5.24□□□□□ -1.57
SMG1-217ENST00000569764 OR2A4O95047 310 aa5.24□□□□□ -1.57
SMG1-217ENST00000569764 ELOBQ15370 118 aa5.24□□□□□ -1.57
SMG1-217ENST00000569764 C1orf100Q5SVJ3 147 aa5.24□□□□□ -1.57
SMG1-217ENST00000569764 ZNF584Q8IVC4 421 aa5.24□□□□□ -1.57
SMG1-217ENST00000569764 DRAM1Q8N682 238 aa5.24□□□□□ -1.57
SMG1-217ENST00000569764 OR2A7Q96R45 310 aa5.24□□□□□ -1.57
SMG1-217ENST00000569764 MRPL20Q9BYC9 149 aaKnown RBP5.24□□□□□ -1.57
SMG1-217ENST00000569764 FGF23Q9GZV9 251 aaPredicted RBP5.24□□□□□ -1.57
SMG1-217ENST00000569764 DYSFO75923 2080 aa5.24□□□□□ -1.57
SMG1-217ENST00000569764 OVOL1O14753 267 aa5.24□□□□□ -1.57
SMG1-217ENST00000569764 HYPMO75409 117 aa5.24□□□□□ -1.57
SMG1-217ENST00000569764 ATP5G1P05496 136 aa5.24□□□□□ -1.57
SMG1-217ENST00000569764 CXCL1P09341 107 aa5.24□□□□□ -1.57
SMG1-217ENST00000569764 PSMB3P49720 205 aa5.24□□□□□ -1.57
SMG1-217ENST00000569764 GNB1P62873 340 aa5.24□□□□□ -1.57
SMG1-217ENST00000569764 TEX43Q6ZNM6 134 aa5.24□□□□□ -1.57
SMG1-217ENST00000569764 OR5H2Q8NGV7 314 aa5.24□□□□□ -1.57
SMG1-217ENST00000569764 OTORQ9NRC9 128 aa5.24□□□□□ -1.57
SMG1-217ENST00000569764 IGHV3OR15-7A0A075B7D8 119 aa5.24□□□□□ -1.57
SMG1-217ENST00000569764 TRAV8-2A0A0B4J237 113 aa5.24□□□□□ -1.57
SMG1-217ENST00000569764 PDCD6O75340 191 aa5.24□□□□□ -1.57
SMG1-217ENST00000569764 MLANAQ16655 118 aa5.24□□□□□ -1.57
SMG1-217ENST00000569764 DEFB112Q30KQ8 113 aa5.24□□□□□ -1.57
SMG1-217ENST00000569764 SPSB3Q6PJ21 355 aa5.24□□□□□ -1.57
SMG1-217ENST00000569764 OR10P1Q8NGE3 313 aa5.24□□□□□ -1.57
SMG1-217ENST00000569764 OR4C16Q8NGL9 310 aa5.24□□□□□ -1.57
SMG1-217ENST00000569764 TMEM230Q96A57 120 aa5.24□□□□□ -1.57
SMG1-217ENST00000569764 TVP23CQ96ET8 276 aa5.24□□□□□ -1.57
SMG1-217ENST00000569764 USMG5Q96IX5 58 aa5.24□□□□□ -1.57
SMG1-217ENST00000569764 TMEM70Q9BUB7 260 aa5.24□□□□□ -1.57
SMG1-217ENST00000569764 CALYQ9NYX4 217 aa5.24□□□□□ -1.57
SMG1-217ENST00000569764 ZNF256Q9Y2P7 627 aaPredicted RBP5.24□□□□□ -1.57
SMG1-217ENST00000569764 YTHDF2Q9Y5A9 579 aaKnown RBP5.24□□□□□ -1.57
SMG1-217ENST00000569764 SMAD5-AS1Q9Y6J3 95 aa5.24□□□□□ -1.57
SMG1-217ENST00000569764 SHANK1Q9Y566 2161 aa5.23□□□□□ -1.57
SMG1-217ENST00000569764 TRAV8-6A0A0B4J262 113 aa5.23□□□□□ -1.57
SMG1-217ENST00000569764 hDV102S1A0JD36 115 aa5.23□□□□□ -1.57
SMG1-217ENST00000569764 VWC2LB2RUY7 222 aa5.23□□□□□ -1.57
SMG1-217ENST00000569764 TAX1BP3O14907 124 aa5.23□□□□□ -1.57
SMG1-217ENST00000569764 SOCS1O15524 211 aa5.23□□□□□ -1.57
SMG1-217ENST00000569764 IGLC2P0DOY2 106 aa5.23□□□□□ -1.57
SMG1-217ENST00000569764 IGLC3P0DOY3 106 aa5.23□□□□□ -1.57
SMG1-217ENST00000569764 CCL1P22362 96 aa5.23□□□□□ -1.57
SMG1-217ENST00000569764 KRTAP27-1Q3LI81 207 aa5.23□□□□□ -1.57
SMG1-217ENST00000569764 C11orf71Q6IPW1 123 aa5.23□□□□□ -1.57
SMG1-217ENST00000569764 ZNF493Q6ZR52 646 aa5.23□□□□□ -1.57
SMG1-217ENST00000569764 KLHL30-AS1Q8NEE0 82 aa5.23□□□□□ -1.57
SMG1-217ENST00000569764 OR10AG1Q8NH19 301 aa5.23□□□□□ -1.57
SMG1-217ENST00000569764 USP24Q9UPU5 2620 aa5.23□□□□□ -1.57
SMG1-217ENST00000569764 MDKP21741 143 aaPredicted RBP5.23□□□□□ -1.57
SMG1-217ENST00000569764 Q6ZPA2 131 aa5.23□□□□□ -1.57
SMG1-217ENST00000569764 TM2D2Q9BX73 214 aa5.23□□□□□ -1.57
SMG1-217ENST00000569764 WNK2Q9Y3S1 2297 aa5.23□□□□□ -1.57
SMG1-217ENST00000569764 CRYBG3Q68DQ2 2970 aa5.23□□□□□ -1.57
SMG1-217ENST00000569764 IGLC7A0M8Q6 106 aa5.23□□□□□ -1.57
SMG1-217ENST00000569764 K7EP34 96 aa5.23□□□□□ -1.57
SMG1-217ENST00000569764 WNT9BO14905 357 aa5.23□□□□□ -1.57
SMG1-217ENST00000569764 LPAR6P43657 344 aa5.23□□□□□ -1.57
SMG1-217ENST00000569764 DIAPH2-AS1Q14236 149 aa5.23□□□□□ -1.57
SMG1-217ENST00000569764 PLEKHB2Q96CS7 222 aa5.23□□□□□ -1.57
SMG1-217ENST00000569764 H3BUT2 72 aa5.23□□□□□ -1.57
SMG1-217ENST00000569764 NDUFS7O75251 213 aa5.23□□□□□ -1.57
SMG1-217ENST00000569764 CTRLP40313 264 aa5.23□□□□□ -1.57
SMG1-217ENST00000569764 HLA-DRB3P79483 266 aa5.23□□□□□ -1.57
SMG1-217ENST00000569764 PYGO1Q9Y3Y4 419 aa5.23□□□□□ -1.57
SMG1-217ENST00000569764 TMEM14DPA8MWL7 114 aa5.22□□□□□ -1.57
SMG1-217ENST00000569764 A8MWV9 139 aa5.22□□□□□ -1.57
SMG1-217ENST00000569764 ZNF345Q14585 488 aa5.22□□□□□ -1.57
SMG1-217ENST00000569764 Q6AWC8 147 aa5.22□□□□□ -1.57
SMG1-217ENST00000569764 BRD3OSQ6XYD6 125 aa5.22□□□□□ -1.57
SMG1-217ENST00000569764 BAGE3Q86Y29 109 aa5.22□□□□□ -1.57
SMG1-217ENST00000569764 BAGE2Q86Y30 109 aa5.22□□□□□ -1.57
SMG1-217ENST00000569764 GPHA2Q96T91 129 aa5.22□□□□□ -1.57
SMG1-217ENST00000569764 UTP20O75691 2785 aaKnown RBP5.22□□□□□ -1.57
SMG1-217ENST00000569764 IGKV1D-8A0A087WSZ0 117 aa5.22□□□□□ -1.57
SMG1-217ENST00000569764 RPL18AQ02543 176 aaKnown RBP5.22□□□□□ -1.57
SMG1-217ENST00000569764 MPV17L2Q567V2 206 aa5.22□□□□□ -1.57
SMG1-217ENST00000569764 IGKV1-12A0A0C4DH73 117 aa5.22□□□□□ -1.57
SMG1-217ENST00000569764 APOMO95445 188 aa5.22□□□□□ -1.57
SMG1-217ENST00000569764 SFT2D2O95562 160 aa5.22□□□□□ -1.57
SMG1-217ENST00000569764 IGKV1D-12P01611 117 aa5.22□□□□□ -1.57
SMG1-217ENST00000569764 GLIPR1P48060 266 aa5.22□□□□□ -1.57
SMG1-217ENST00000569764 KISS1Q15726 138 aa5.22□□□□□ -1.57
SMG1-217ENST00000569764 ATOH7Q8N100 152 aa5.22□□□□□ -1.57
SMG1-217ENST00000569764 DEFB125Q8N687 156 aa5.22□□□□□ -1.57
SMG1-217ENST00000569764 AQP3Q92482 292 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms