RNA–Protein interactions for RNA: ENST00000564734.5

HERC2-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 1 (best)

Gene HERC2, Length 3,121 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-207ENST00000564734 C15orf32Q32M92 178 aa11.8□□□□□ -0.52
HERC2-207ENST00000564734 UNQ5815/PRO19632Q6UWF5 114 aa11.8□□□□□ -0.52
HERC2-207ENST00000564734 AMN1Q8IY45 258 aa11.8□□□□□ -0.52
HERC2-207ENST00000564734 PRSS3P2Q8NHM4 247 aa11.8□□□□□ -0.52
HERC2-207ENST00000564734 SCRT2Q9NQ03 307 aa11.8□□□□□ -0.52
HERC2-207ENST00000564734 EFNA4P52798 201 aa11.8□□□□□ -0.52
HERC2-207ENST00000564734 RPS20P60866 119 aaKnown RBP11.8□□□□□ -0.52
HERC2-207ENST00000564734 FA2HQ7L5A8 372 aa11.8□□□□□ -0.52
HERC2-207ENST00000564734 SIGLEC8Q9NYZ4 499 aa11.8□□□□□ -0.52
HERC2-207ENST00000564734 IGHV3OR16-8A0A075B7F1 116 aa11.8□□□□□ -0.52
HERC2-207ENST00000564734 CLPSL1A2RUU4 121 aa11.8□□□□□ -0.52
HERC2-207ENST00000564734 BUB3O43684 328 aa11.8□□□□□ -0.52
HERC2-207ENST00000564734 GPR183P32249 361 aa11.8□□□□□ -0.52
HERC2-207ENST00000564734 LOXL1Q08397 574 aaPredicted RBP11.8□□□□□ -0.52
HERC2-207ENST00000564734 BMI1P35226 326 aa11.79□□□□□ -0.52
HERC2-207ENST00000564734 SAA4P35542 130 aa11.79□□□□□ -0.52
HERC2-207ENST00000564734 PAX8Q06710 450 aa11.79□□□□□ -0.52
HERC2-207ENST00000564734 MRPL51Q4U2R6 128 aaKnown RBP11.79□□□□□ -0.52
HERC2-207ENST00000564734 ORAOV1Q8WV07 137 aa11.79□□□□□ -0.52
HERC2-207ENST00000564734 HECTD1Q9ULT8 2610 aa11.79□□□□□ -0.52
HERC2-207ENST00000564734 IGHV3-35A0A0C4DH35 117 aa11.79□□□□□ -0.52
HERC2-207ENST00000564734 CLEC3BP05452 202 aa11.79□□□□□ -0.52
HERC2-207ENST00000564734 S100A7P31151 101 aa11.79□□□□□ -0.52
HERC2-207ENST00000564734 RHOGP84095 191 aa11.79□□□□□ -0.52
HERC2-207ENST00000564734 OR10AG1Q8NH19 301 aa11.79□□□□□ -0.52
HERC2-207ENST00000564734 CCDC140Q96MF4 163 aa11.79□□□□□ -0.52
HERC2-207ENST00000564734 PRELID3AQ96N28 172 aa11.79□□□□□ -0.52
HERC2-207ENST00000564734 MS4A6AQ9H2W1 248 aa11.79□□□□□ -0.52
HERC2-207ENST00000564734 NCR2O95944 276 aa11.78□□□□□ -0.52
HERC2-207ENST00000564734 ECSCRQ19T08 205 aa11.78□□□□□ -0.52
HERC2-207ENST00000564734 UBTD1Q9HAC8 227 aa11.78□□□□□ -0.52
HERC2-207ENST00000564734 LINC01548A6NM66 108 aa11.78□□□□□ -0.52
HERC2-207ENST00000564734 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.78□□□□□ -0.52
HERC2-207ENST00000564734 ORMDL3Q8N138 153 aa11.78□□□□□ -0.52
HERC2-207ENST00000564734 FER1L6-AS1Q8NA97 138 aa11.78□□□□□ -0.52
HERC2-207ENST00000564734 GCN1Q92616 2671 aaKnown RBP11.78□□□□□ -0.52
HERC2-207ENST00000564734 CENPVL3A0A0U1RRI6 287 aa11.77□□□□□ -0.52
HERC2-207ENST00000564734 PRAC2D3DTV9 90 aa11.77□□□□□ -0.52
HERC2-207ENST00000564734 MUC21A0A0G2JKD1 596 aa11.77□□□□□ -0.53
HERC2-207ENST00000564734 MUC21A0A140T8X8 626 aa11.77□□□□□ -0.53
HERC2-207ENST00000564734 MUC21Q5SSG8 566 aa11.77□□□□□ -0.53
HERC2-207ENST00000564734 PIP4P2Q8N4L2 257 aa11.77□□□□□ -0.53
HERC2-207ENST00000564734 CSMD1Q96PZ7 3565 aa11.77□□□□□ -0.53
HERC2-207ENST00000564734 RAB9AP51151 201 aa11.77□□□□□ -0.53
HERC2-207ENST00000564734 ERCC8Q13216 396 aa11.77□□□□□ -0.53
HERC2-207ENST00000564734 SLC25A34Q6PIV7 304 aa11.77□□□□□ -0.53
HERC2-207ENST00000564734 ITLN2Q8WWU7 325 aaPredicted RBP11.77□□□□□ -0.53
HERC2-207ENST00000564734 CNFNQ9BYD5 112 aa11.77□□□□□ -0.53
HERC2-207ENST00000564734 RBAKDNA6NC62 111 aa11.76□□□□□ -0.53
HERC2-207ENST00000564734 HSBP1L1C9JCN9 74 aa11.76□□□□□ -0.53
HERC2-207ENST00000564734 PMCHL2Q9BQD1 86 aa11.76□□□□□ -0.53
HERC2-207ENST00000564734 BPESC1Q9GZL8 116 aa11.76□□□□□ -0.53
HERC2-207ENST00000564734 COX11Q9Y6N1 276 aa11.76□□□□□ -0.53
HERC2-207ENST00000564734 LOC389332A0A1B0GUA5 103 aa11.76□□□□□ -0.53
HERC2-207ENST00000564734 G3V318 75 aa11.76□□□□□ -0.53
HERC2-207ENST00000564734 Q6ZVH6 145 aa11.76□□□□□ -0.53
HERC2-207ENST00000564734 H0Y8G0 127 aa11.75□□□□□ -0.53
HERC2-207ENST00000564734 NPFFO15130 113 aa11.75□□□□□ -0.53
HERC2-207ENST00000564734 PCP4P48539 62 aa11.75□□□□□ -0.53
HERC2-207ENST00000564734 FABP5P3A8MUU1 101 aa11.75□□□□□ -0.53
HERC2-207ENST00000564734 GOSR1O95249 250 aa11.75□□□□□ -0.53
HERC2-207ENST00000564734 RNF185Q96GF1 192 aa11.75□□□□□ -0.53
HERC2-207ENST00000564734 TIMM8BQ9Y5J9 83 aaPredicted RBP11.75□□□□□ -0.53
HERC2-207ENST00000564734 TWIST1Q15672 202 aa11.75□□□□□ -0.53
HERC2-207ENST00000564734 LINC01559Q495D7 138 aa11.75□□□□□ -0.53
HERC2-207ENST00000564734 CLEC19AQ6UXS0 136 aa11.75□□□□□ -0.53
HERC2-207ENST00000564734 RNF182Q8N6D2 247 aa11.75□□□□□ -0.53
HERC2-207ENST00000564734 C5orf56Q8N8D9 126 aa11.75□□□□□ -0.53
HERC2-207ENST00000564734 NPYP01303 97 aa11.74□□□□□ -0.53
HERC2-207ENST00000564734 MPV17L2Q567V2 206 aa11.74□□□□□ -0.53
HERC2-207ENST00000564734 TRAV8-2A0A0B4J237 113 aa11.74□□□□□ -0.53
HERC2-207ENST00000564734 C19orf84I3L1E1 186 aa11.74□□□□□ -0.53
HERC2-207ENST00000564734 SLC50A1Q9BRV3 221 aa11.74□□□□□ -0.53
HERC2-207ENST00000564734 U3KQE9 123 aa11.74□□□□□ -0.53
HERC2-207ENST00000564734 TENM4Q6N022 2769 aa11.74□□□□□ -0.53
HERC2-207ENST00000564734 C19orf54Q5BKX5 351 aa11.73□□□□□ -0.53
HERC2-207ENST00000564734 MSRB1Q9NZV6 116 aa11.73□□□□□ -0.53
HERC2-207ENST00000564734 MED13LQ71F56 2210 aa11.73□□□□□ -0.53
HERC2-207ENST00000564734 TRBV7-1A0A0A6YYK4 115 aa11.73□□□□□ -0.53
HERC2-207ENST00000564734 SMKR1H3BMG3 65 aa11.73□□□□□ -0.53
HERC2-207ENST00000564734 BVES-AS1Q5T3Y7 98 aa11.73□□□□□ -0.53
HERC2-207ENST00000564734 EEF1AKMT3Q96AZ1 226 aa11.73□□□□□ -0.53
HERC2-207ENST00000564734 UBR5O95071 2799 aaPredicted RBP11.73□□□□□ -0.53
HERC2-207ENST00000564734 IGHV3-66A0A0C4DH42 116 aa11.73□□□□□ -0.53
HERC2-207ENST00000564734 LINC01546A6NGU7 62 aa11.73□□□□□ -0.53
HERC2-207ENST00000564734 ORM1P02763 201 aa11.73□□□□□ -0.53
HERC2-207ENST00000564734 CKS2P33552 79 aa11.73□□□□□ -0.53
HERC2-207ENST00000564734 NPFFR1Q9GZQ6 430 aa11.73□□□□□ -0.53
HERC2-207ENST00000564734 CCDC168Q8NDH2 2452 aa11.72□□□□□ -0.53
HERC2-207ENST00000564734 FLNBO75369 2602 aaKnown RBP11.72□□□□□ -0.53
HERC2-207ENST00000564734 COX8AP10176 69 aa11.72□□□□□ -0.53
HERC2-207ENST00000564734 IL17RELQ6ZVW7 336 aa11.72□□□□□ -0.53
HERC2-207ENST00000564734 ZNF738Q8NE65 137 aa11.72□□□□□ -0.53
HERC2-207ENST00000564734 CCL25O15444 150 aa11.72□□□□□ -0.53
HERC2-207ENST00000564734 AGPAT4-IT1Q9H0P7 198 aa11.72□□□□□ -0.53
HERC2-207ENST00000564734 LGALS9BQ3B8N2 356 aa11.71□□□□□ -0.53
HERC2-207ENST00000564734 LGALS9CQ6DKI2 356 aa11.71□□□□□ -0.53
HERC2-207ENST00000564734 DPF1Q92782 380 aa11.71□□□□□ -0.53
HERC2-207ENST00000564734 MRPL53Q96EL3 112 aaKnown RBP11.71□□□□□ -0.53
HERC2-207ENST00000564734 NUDT3O95989 172 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms