RNA–Protein interactions for RNA: ENST00000564678.1

HERPUD1-209, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 2,199 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-209ENST00000564678 MSMBP08118 114 aa5.61□□□□□ -1.51
HERPUD1-209ENST00000564678 KLF5Q13887 457 aaPredicted RBP5.61□□□□□ -1.51
HERPUD1-209ENST00000564678 Q6AWC8 147 aa5.61□□□□□ -1.51
HERPUD1-209ENST00000564678 CYB5R2Q6BCY4 276 aa5.61□□□□□ -1.51
HERPUD1-209ENST00000564678 TOMM20LQ6UXN7 152 aa5.61□□□□□ -1.51
HERPUD1-209ENST00000564678 FAM223AQ8IWN6 122 aa5.61□□□□□ -1.51
HERPUD1-209ENST00000564678 CIARTQ8N365 385 aaPredicted RBP5.61□□□□□ -1.51
HERPUD1-209ENST00000564678 SIGLECL1Q8N7X8 197 aa5.61□□□□□ -1.51
HERPUD1-209ENST00000564678 NOL4LQ96MY1 436 aaPredicted RBP5.61□□□□□ -1.51
HERPUD1-209ENST00000564678 SAMD10Q9BYL1 202 aa5.61□□□□□ -1.51
HERPUD1-209ENST00000564678 IGHV4-30-2A0A087WSY4 118 aa5.6□□□□□ -1.51
HERPUD1-209ENST00000564678 TRAV26-1A0A087WT03 109 aa5.6□□□□□ -1.51
HERPUD1-209ENST00000564678 TRAV41A0A0B4J266 112 aa5.6□□□□□ -1.51
HERPUD1-209ENST00000564678 TRAV40A0A0B4J280 105 aa5.6□□□□□ -1.51
HERPUD1-209ENST00000564678 A0A1B0GW15 77 aa5.6□□□□□ -1.51
HERPUD1-209ENST00000564678 B4DSR2 109 aa5.6□□□□□ -1.51
HERPUD1-209ENST00000564678 G3V318 75 aa5.6□□□□□ -1.51
HERPUD1-209ENST00000564678 H3BUA1 57 aa5.6□□□□□ -1.51
HERPUD1-209ENST00000564678 BUB3O43684 328 aa5.6□□□□□ -1.51
HERPUD1-209ENST00000564678 IGHV3-23P01764 117 aa5.6□□□□□ -1.51
HERPUD1-209ENST00000564678 IGF1P05019 195 aa5.6□□□□□ -1.51
HERPUD1-209ENST00000564678 CT45A10P0DMU9 189 aa5.6□□□□□ -1.51
HERPUD1-209ENST00000564678 GPR183P32249 361 aa5.6□□□□□ -1.51
HERPUD1-209ENST00000564678 SSTP61278 116 aa5.6□□□□□ -1.51
HERPUD1-209ENST00000564678 ATP5G2Q06055 141 aa5.6□□□□□ -1.51
HERPUD1-209ENST00000564678 KIAA1644Q3SXP7 199 aa5.6□□□□□ -1.51
HERPUD1-209ENST00000564678 TCF24Q7RTU0 167 aa5.6□□□□□ -1.51
HERPUD1-209ENST00000564678 OR2D3Q8NGH3 330 aa5.6□□□□□ -1.51
HERPUD1-209ENST00000564678 GTSF1Q8WW33 167 aa5.6□□□□□ -1.51
HERPUD1-209ENST00000564678 ACACBO00763 2458 aa5.6□□□□□ -1.51
HERPUD1-209ENST00000564678 LINC01548A6NM66 108 aa5.6□□□□□ -1.51
HERPUD1-209ENST00000564678 M0R3E3 92 aa5.6□□□□□ -1.51
HERPUD1-209ENST00000564678 SLC25A16P16260 332 aa5.6□□□□□ -1.51
HERPUD1-209ENST00000564678 GDF5OSQ5U4N7 250 aa5.6□□□□□ -1.51
HERPUD1-209ENST00000564678 ZNF664Q8N3J9 261 aa5.6□□□□□ -1.51
HERPUD1-209ENST00000564678 C18orf32Q8TCD1 76 aa5.6□□□□□ -1.51
HERPUD1-209ENST00000564678 ZC2HC1AQ96GY0 325 aa5.6□□□□□ -1.51
HERPUD1-209ENST00000564678 KCNS1Q96KK3 526 aa5.6□□□□□ -1.51
HERPUD1-209ENST00000564678 SLC50A1Q9BRV3 221 aa5.6□□□□□ -1.51
HERPUD1-209ENST00000564678 KRTAP4-8Q9BYQ9 185 aa5.6□□□□□ -1.51
HERPUD1-209ENST00000564678 CLEC5AQ9NY25 188 aa5.6□□□□□ -1.51
HERPUD1-209ENST00000564678 NAGKQ9UJ70 344 aa5.6□□□□□ -1.51
HERPUD1-209ENST00000564678 SMAD5-AS1Q9Y6J3 95 aa5.6□□□□□ -1.51
HERPUD1-209ENST00000564678 COL12A1Q99715 3063 aa5.6□□□□□ -1.51
HERPUD1-209ENST00000564678 TRGV11A0A075B6L2 103 aa5.59□□□□□ -1.51
HERPUD1-209ENST00000564678 A0A1W2PS18 150 aa5.59□□□□□ -1.51
HERPUD1-209ENST00000564678 RBAKDNA6NC62 111 aa5.59□□□□□ -1.51
HERPUD1-209ENST00000564678 ZNF324O75467 553 aaPredicted RBP5.59□□□□□ -1.51
HERPUD1-209ENST00000564678 IGLV1-40P01703 118 aa5.59□□□□□ -1.51
HERPUD1-209ENST00000564678 IGHG2P01859 326 aa5.59□□□□□ -1.51
HERPUD1-209ENST00000564678 CLEC19AQ6UXS0 136 aa5.59□□□□□ -1.51
HERPUD1-209ENST00000564678 IL17RELQ6ZVW7 336 aa5.59□□□□□ -1.51
HERPUD1-209ENST00000564678 GATD1Q8NB37 220 aa5.59□□□□□ -1.51
HERPUD1-209ENST00000564678 PGLYRP4Q96LB8 373 aa5.59□□□□□ -1.51
HERPUD1-209ENST00000564678 NDFIP1Q9BT67 221 aa5.59□□□□□ -1.51
HERPUD1-209ENST00000564678 SPTAN1Q13813 2472 aaKnown RBP5.59□□□□□ -1.51
HERPUD1-209ENST00000564678 DOPEY1Q5JWR5 2465 aa5.59□□□□□ -1.52
HERPUD1-209ENST00000564678 A0A1B0GUT8 65 aa5.59□□□□□ -1.52
HERPUD1-209ENST00000564678 A6NDX4 124 aa5.59□□□□□ -1.52
HERPUD1-209ENST00000564678 F2Z2F3 143 aa5.59□□□□□ -1.52
HERPUD1-209ENST00000564678 CCL24O00175 119 aa5.59□□□□□ -1.52
HERPUD1-209ENST00000564678 APOHP02749 345 aaPredicted RBP5.59□□□□□ -1.52
HERPUD1-209ENST00000564678 DDTP30046 118 aa5.59□□□□□ -1.52
HERPUD1-209ENST00000564678 CRIP1P50238 77 aa5.59□□□□□ -1.52
HERPUD1-209ENST00000564678 DEFA6Q01524 100 aa5.59□□□□□ -1.52
HERPUD1-209ENST00000564678 RIGQ13278 110 aa5.59□□□□□ -1.52
HERPUD1-209ENST00000564678 BRD3OSQ6XYD6 125 aa5.59□□□□□ -1.52
HERPUD1-209ENST00000564678 TMEM219Q86XT9 240 aa5.59□□□□□ -1.52
HERPUD1-209ENST00000564678 USMG5Q96IX5 58 aa5.59□□□□□ -1.52
HERPUD1-209ENST00000564678 METTL26Q96S19 204 aa5.59□□□□□ -1.52
HERPUD1-209ENST00000564678 CACNA1BQ00975 2339 aa5.58□□□□□ -1.52
HERPUD1-209ENST00000564678 CLPSL1A2RUU4 121 aa5.58□□□□□ -1.52
HERPUD1-209ENST00000564678 CHEK1O14757 476 aa5.58□□□□□ -1.52
HERPUD1-209ENST00000564678 IGHV4-38-2P0DP08 117 aa5.58□□□□□ -1.52
HERPUD1-209ENST00000564678 AMTP48728 403 aa5.58□□□□□ -1.52
HERPUD1-209ENST00000564678 RPS20P60866 119 aaKnown RBP5.58□□□□□ -1.52
HERPUD1-209ENST00000564678 LCN12Q6JVE5 192 aa5.58□□□□□ -1.52
HERPUD1-209ENST00000564678 NPFFR1Q9GZQ6 430 aa5.58□□□□□ -1.52
HERPUD1-209ENST00000564678 ZNF580Q9UK33 172 aa5.58□□□□□ -1.52
HERPUD1-209ENST00000564678 ABCA2Q9BZC7 2435 aa5.58□□□□□ -1.52
HERPUD1-209ENST00000564678 IGHV3OR16-10A0A075B7F0 116 aa5.57□□□□□ -1.52
HERPUD1-209ENST00000564678 IGHG4P01861 327 aa5.57□□□□□ -1.52
HERPUD1-209ENST00000564678 RAB4AP20338 218 aa5.57□□□□□ -1.52
HERPUD1-209ENST00000564678 RNASEKQ6P5S7 137 aaKnown RBP5.57□□□□□ -1.52
HERPUD1-209ENST00000564678 BORCS7Q96B45 105 aa5.57□□□□□ -1.52
HERPUD1-209ENST00000564678 RCHY1Q96PM5 261 aa5.57□□□□□ -1.52
HERPUD1-209ENST00000564678 NRN1Q9NPD7 142 aa5.57□□□□□ -1.52
HERPUD1-209ENST00000564678 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP5.57□□□□□ -1.52
HERPUD1-209ENST00000564678 TMEM189A5PLL7 270 aa5.57□□□□□ -1.52
HERPUD1-209ENST00000564678 ZNF705FA8MVS1 300 aaPredicted RBP5.57□□□□□ -1.52
HERPUD1-209ENST00000564678 J3QLI3 93 aa5.57□□□□□ -1.52
HERPUD1-209ENST00000564678 HSBP1O75506 76 aa5.57□□□□□ -1.52
HERPUD1-209ENST00000564678 TRGV3P03979 118 aa5.57□□□□□ -1.52
HERPUD1-209ENST00000564678 ZNF705DP0CH99 300 aaPredicted RBP5.57□□□□□ -1.52
HERPUD1-209ENST00000564678 ZNF705BP0CI00 300 aaPredicted RBP5.57□□□□□ -1.52
HERPUD1-209ENST00000564678 RNF224P0DH78 156 aa5.57□□□□□ -1.52
HERPUD1-209ENST00000564678 ZNF415Q09FC8 603 aa5.57□□□□□ -1.52
HERPUD1-209ENST00000564678 TEX43Q6ZNM6 134 aa5.57□□□□□ -1.52
HERPUD1-209ENST00000564678 ZNF493Q6ZR52 646 aa5.57□□□□□ -1.52
HERPUD1-209ENST00000564678 CHCHD1Q96BP2 118 aaKnown RBP5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 85.3 ms