RNA–Protein interactions for RNA: ENST00000564255.5

CHD9-209, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 2,896 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-209ENST00000564255 SNHG12Q9BXW3 62 aa1.18□□□□□ -2.22
CHD9-209ENST00000564255 SCN3BQ9NY72 215 aa1.18□□□□□ -2.22
CHD9-209ENST00000564255 TP73-AS1Q9UF72 201 aa1.18□□□□□ -2.22
CHD9-209ENST00000564255 BOKQ9UMX3 212 aaPredicted RBP1.18□□□□□ -2.22
CHD9-209ENST00000564255 DOCK6Q96HP0 2047 aa1.18□□□□□ -2.22
CHD9-209ENST00000564255 ECM29Q5VYK3 1845 aa1.18□□□□□ -2.22
CHD9-209ENST00000564255 TOGARAM1Q9Y4F4 1720 aa1.18□□□□□ -2.22
CHD9-209ENST00000564255 BCORQ6W2J9 1755 aa1.18□□□□□ -2.22
CHD9-209ENST00000564255 FAT3Q8TDW7 4589 aa1.18□□□□□ -2.22
CHD9-209ENST00000564255 TRPM6Q9BX84 2022 aa1.18□□□□□ -2.22
CHD9-209ENST00000564255 COL5A1P20908 1838 aaPredicted RBP1.18□□□□□ -2.22
CHD9-209ENST00000564255 TRBV7-6A0A0J9YX20 115 aa1.18□□□□□ -2.22
CHD9-209ENST00000564255 ZNF670-ZNF695F2Z2N8 137 aa1.18□□□□□ -2.22
CHD9-209ENST00000564255 NPFFO15130 113 aa1.18□□□□□ -2.22
CHD9-209ENST00000564255 LEPROTO15243 131 aa1.18□□□□□ -2.22
CHD9-209ENST00000564255 IGKV1-5P01602 117 aa1.18□□□□□ -2.22
CHD9-209ENST00000564255 NDUFA6P56556 154 aa1.18□□□□□ -2.22
CHD9-209ENST00000564255 HIST1H4AP62805 103 aaKnown RBP1.18□□□□□ -2.22
CHD9-209ENST00000564255 RHOGP84095 191 aa1.18□□□□□ -2.22
CHD9-209ENST00000564255 C4orf33Q8N1A6 199 aa1.18□□□□□ -2.22
CHD9-209ENST00000564255 OR4S1Q8NGB4 309 aa1.18□□□□□ -2.22
CHD9-209ENST00000564255 ZCCHC13Q8WW36 166 aaKnown RBP1.18□□□□□ -2.22
CHD9-209ENST00000564255 TEX37Q96LM6 180 aa1.18□□□□□ -2.22
CHD9-209ENST00000564255 TMEM133Q9H2Q1 129 aa1.18□□□□□ -2.22
CHD9-209ENST00000564255 HHLA3Q9XRX5 114 aa1.18□□□□□ -2.22
CHD9-209ENST00000564255 FUT9Q9Y231 359 aa1.18□□□□□ -2.22
CHD9-209ENST00000564255 CDK5RAP2Q96SN8 1893 aa1.18□□□□□ -2.22
CHD9-209ENST00000564255 KDM3BQ7LBC6 1761 aa1.18□□□□□ -2.22
CHD9-209ENST00000564255 COL1A1P02452 1464 aaPredicted RBP1.18□□□□□ -2.22
CHD9-209ENST00000564255 TRAV9-1A0A075B6T8 112 aa1.18□□□□□ -2.22
CHD9-209ENST00000564255 IGKV1D-43A0A0B4J1Z2 117 aa1.18□□□□□ -2.22
CHD9-209ENST00000564255 SPAARA0A1B0GVQ0 90 aa1.18□□□□□ -2.22
CHD9-209ENST00000564255 TLCD2A6NGC4 264 aa1.18□□□□□ -2.22
CHD9-209ENST00000564255 INSL3P51460 131 aa1.18□□□□□ -2.22
CHD9-209ENST00000564255 HSD17B12Q53GQ0 312 aa1.18□□□□□ -2.22
CHD9-209ENST00000564255 ZNF436-AS1Q8NC38 126 aaPredicted RBP1.18□□□□□ -2.22
CHD9-209ENST00000564255 PPTC7Q8NI37 304 aa1.18□□□□□ -2.22
CHD9-209ENST00000564255 TOMM6Q96B49 74 aa1.18□□□□□ -2.22
CHD9-209ENST00000564255 C2orf50Q96LR7 162 aa1.18□□□□□ -2.22
CHD9-209ENST00000564255 OTORQ9NRC9 128 aa1.18□□□□□ -2.22
CHD9-209ENST00000564255 METTL1Q9UBP6 276 aaKnown RBP1.18□□□□□ -2.22
CHD9-209ENST00000564255 NAT8Q9UHE5 227 aa1.18□□□□□ -2.22
CHD9-209ENST00000564255 SCP2D1Q9UJQ7 156 aa1.18□□□□□ -2.22
CHD9-209ENST00000564255 SOX21Q9Y651 276 aaPredicted RBP1.18□□□□□ -2.22
CHD9-209ENST00000564255 NRXN2Q9P2S2 1712 aa1.17□□□□□ -2.22
CHD9-209ENST00000564255 CUL9Q8IWT3 2517 aa1.17□□□□□ -2.22
CHD9-209ENST00000564255 NCKAP5O14513 1909 aa1.17□□□□□ -2.22
CHD9-209ENST00000564255 SCN7AQ01118 1682 aa1.17□□□□□ -2.22
CHD9-209ENST00000564255 SCN9AQ15858 1988 aa1.17□□□□□ -2.22
CHD9-209ENST00000564255 TRAV41A0A0B4J266 112 aa1.17□□□□□ -2.22
CHD9-209ENST00000564255 GGT3PA6NGU5 568 aa1.17□□□□□ -2.22
CHD9-209ENST00000564255 C1QAP02745 245 aa1.17□□□□□ -2.22
CHD9-209ENST00000564255 MT-ND4LP03901 98 aa1.17□□□□□ -2.22
CHD9-209ENST00000564255 MSMO1Q15800 293 aa1.17□□□□□ -2.22
CHD9-209ENST00000564255 RRN3P1Q2M238 152 aa1.17□□□□□ -2.22
CHD9-209ENST00000564255 KRTAP6-3Q3LI67 103 aa1.17□□□□□ -2.22
CHD9-209ENST00000564255 COL5A1-AS1Q5SY13 56 aa1.17□□□□□ -2.22
CHD9-209ENST00000564255 BCL2L15Q5TBC7 163 aa1.17□□□□□ -2.22
CHD9-209ENST00000564255 TMEM244Q5VVB8 128 aa1.17□□□□□ -2.22
CHD9-209ENST00000564255 SLC35E3Q7Z769 313 aa1.17□□□□□ -2.22
CHD9-209ENST00000564255 Q8NDZ9 215 aa1.17□□□□□ -2.22
CHD9-209ENST00000564255 MRPL57Q9BQC6 102 aaKnown RBP1.17□□□□□ -2.22
CHD9-209ENST00000564255 NDUFB11Q9NX14 153 aa1.17□□□□□ -2.22
CHD9-209ENST00000564255 IL36BQ9NZH7 164 aa1.17□□□□□ -2.22
CHD9-209ENST00000564255 EP400Q96L91 3159 aa1.17□□□□□ -2.22
CHD9-209ENST00000564255 PIEZO1Q92508 2521 aa1.17□□□□□ -2.22
CHD9-209ENST00000564255 DOT1LQ8TEK3 1739 aa1.17□□□□□ -2.22
CHD9-209ENST00000564255 LYZL6O75951 148 aa1.17□□□□□ -2.22
CHD9-209ENST00000564255 PRM2P04554 102 aa1.17□□□□□ -2.22
CHD9-209ENST00000564255 MSMBP08118 114 aa1.17□□□□□ -2.22
CHD9-209ENST00000564255 PAEPP09466 180 aa1.17□□□□□ -2.22
CHD9-209ENST00000564255 CRYGSP22914 178 aa1.17□□□□□ -2.22
CHD9-209ENST00000564255 PSMB8P28062 276 aa1.17□□□□□ -2.22
CHD9-209ENST00000564255 CASP1P29466 404 aa1.17□□□□□ -2.22
CHD9-209ENST00000564255 BRS3P32247 399 aa1.17□□□□□ -2.22
CHD9-209ENST00000564255 GUCA1AP43080 201 aaPredicted RBP1.17□□□□□ -2.22
CHD9-209ENST00000564255 CSN1S1P47710 185 aa1.17□□□□□ -2.22
CHD9-209ENST00000564255 TMBIM6P55061 237 aa1.17□□□□□ -2.22
CHD9-209ENST00000564255 BTG2P78543 158 aa1.17□□□□□ -2.22
CHD9-209ENST00000564255 RPP25LQ8N5L8 163 aaKnown RBP1.17□□□□□ -2.22
CHD9-209ENST00000564255 H1FXQ92522 213 aaKnown RBP1.17□□□□□ -2.22
CHD9-209ENST00000564255 AP1S3Q96PC3 154 aa1.17□□□□□ -2.22
CHD9-209ENST00000564255 IMMP2LQ96T52 175 aa1.17□□□□□ -2.22
CHD9-209ENST00000564255 SDF2Q99470 211 aa1.17□□□□□ -2.22
CHD9-209ENST00000564255 TMEM191AQ9H0A3 160 aa1.17□□□□□ -2.22
CHD9-209ENST00000564255 CBLN4Q9NTU7 201 aa1.17□□□□□ -2.22
CHD9-209ENST00000564255 SCN11AQ9UI33 1791 aa1.17□□□□□ -2.22
CHD9-209ENST00000564255 SHANK1Q9Y566 2161 aa1.16□□□□□ -2.22
CHD9-209ENST00000564255 ARFGEF2Q9Y6D5 1785 aa1.16□□□□□ -2.22
CHD9-209ENST00000564255 IRGMA1A4Y4 181 aa1.16□□□□□ -2.22
CHD9-209ENST00000564255 MEIS3P1A6NDR6 274 aa1.16□□□□□ -2.22
CHD9-209ENST00000564255 TAX1BP3O14907 124 aa1.16□□□□□ -2.22
CHD9-209ENST00000564255 AKAIN1P0CW23 69 aa1.16□□□□□ -2.22
CHD9-209ENST00000564255 HIST1H1DP16402 221 aaKnown RBP1.16□□□□□ -2.22
CHD9-209ENST00000564255 HIST1H2BOP23527 126 aa1.16□□□□□ -2.22
CHD9-209ENST00000564255 NFYBP25208 207 aa1.16□□□□□ -2.22
CHD9-209ENST00000564255 HIST1H2BBP33778 126 aa1.16□□□□□ -2.22
CHD9-209ENST00000564255 SDC2P34741 201 aa1.16□□□□□ -2.22
CHD9-209ENST00000564255 HIST1H2BDP58876 126 aa1.16□□□□□ -2.22
CHD9-209ENST00000564255 HIST1H2BCP62807 126 aa1.16□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 91.3 ms