RNA–Protein interactions for RNA: ENST00000560462.1

HERC1-208, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 647 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-208ENST00000560462 RNASEKQ6P5S7 137 aaKnown RBP3.95□□□□□ -1.78
HERC1-208ENST00000560462 ZNF818PQ6ZRF7 136 aa3.95□□□□□ -1.78
HERC1-208ENST00000560462 SPAG16Q8N0X2 631 aa3.95□□□□□ -1.78
HERC1-208ENST00000560462 TMEM263Q8WUH6 116 aaKnown RBP3.95□□□□□ -1.78
HERC1-208ENST00000560462 BCL7BQ9BQE9 202 aa3.95□□□□□ -1.78
HERC1-208ENST00000560462 NUDT15Q9NV35 164 aa3.95□□□□□ -1.78
HERC1-208ENST00000560462 BET1LQ9NYM9 111 aa3.95□□□□□ -1.78
HERC1-208ENST00000560462 EHFQ9NZC4 300 aa3.95□□□□□ -1.78
HERC1-208ENST00000560462 PYGO1Q9Y3Y4 419 aa3.95□□□□□ -1.78
HERC1-208ENST00000560462 TRGV2A0A075B6R0 118 aa3.94□□□□□ -1.78
HERC1-208ENST00000560462 F6UB75 175 aa3.94□□□□□ -1.78
HERC1-208ENST00000560462 SULT1C2O00338 296 aa3.94□□□□□ -1.78
HERC1-208ENST00000560462 CRXO43186 299 aaPredicted RBP3.94□□□□□ -1.78
HERC1-208ENST00000560462 RBFOX2O43251 390 aaKnown RBP eCLIP3.94□□□□□ -1.78
HERC1-208ENST00000560462 TGFBR1P36897 503 aa3.94□□□□□ -1.78
HERC1-208ENST00000560462 TAS2R31P59538 309 aa3.94□□□□□ -1.78
HERC1-208ENST00000560462 MT1HP80294 61 aa3.94□□□□□ -1.78
HERC1-208ENST00000560462 MSMO1Q15800 293 aa3.94□□□□□ -1.78
HERC1-208ENST00000560462 SPINK13Q1W4C9 94 aa3.94□□□□□ -1.78
HERC1-208ENST00000560462 AADACL3Q5VUY0 350 aa3.94□□□□□ -1.78
HERC1-208ENST00000560462 AMTNQ6UX39 209 aa3.94□□□□□ -1.78
HERC1-208ENST00000560462 HSD17B13Q7Z5P4 300 aaPredicted RBP3.94□□□□□ -1.78
HERC1-208ENST00000560462 BAP18Q8IXM2 172 aa3.94□□□□□ -1.78
HERC1-208ENST00000560462 LINC01561Q8N1V8 128 aa3.94□□□□□ -1.78
HERC1-208ENST00000560462 TMEM256Q8N2U0 113 aa3.94□□□□□ -1.78
HERC1-208ENST00000560462 OR51H1Q8NH63 302 aa3.94□□□□□ -1.78
HERC1-208ENST00000560462 ATP6V0E2Q8NHE4 81 aa3.94□□□□□ -1.78
HERC1-208ENST00000560462 COQ8AQ8NI60 647 aa3.94□□□□□ -1.78
HERC1-208ENST00000560462 C9orf85Q96MD7 179 aa3.94□□□□□ -1.78
HERC1-208ENST00000560462 COMMD5Q9GZQ3 224 aa3.94□□□□□ -1.78
HERC1-208ENST00000560462 FXYD6Q9H0Q3 95 aa3.94□□□□□ -1.78
HERC1-208ENST00000560462 HRASLSQ9HDD0 168 aa3.94□□□□□ -1.78
HERC1-208ENST00000560462 IFT46Q9NQC8 304 aa3.94□□□□□ -1.78
HERC1-208ENST00000560462 DIABLOQ9NR28 239 aa3.94□□□□□ -1.78
HERC1-208ENST00000560462 GPR98Q8WXG9 6306 aa3.94□□□□□ -1.78
HERC1-208ENST00000560462 A0A0J9YX75 114 aa3.93□□□□□ -1.78
HERC1-208ENST00000560462 HPRT1P00492 218 aa3.93□□□□□ -1.78
HERC1-208ENST00000560462 IGHV3-48P01763 117 aa3.93□□□□□ -1.78
HERC1-208ENST00000560462 NQO2P16083 231 aa3.93□□□□□ -1.78
HERC1-208ENST00000560462 SRIP30626 198 aa3.93□□□□□ -1.78
HERC1-208ENST00000560462 CBX5P45973 191 aa3.93□□□□□ -1.78
HERC1-208ENST00000560462 TAS2R20P59543 309 aa3.93□□□□□ -1.78
HERC1-208ENST00000560462 PRCDQ00LT1 54 aa3.93□□□□□ -1.78
HERC1-208ENST00000560462 POU2AF1Q16633 256 aa3.93□□□□□ -1.78
HERC1-208ENST00000560462 ZNF876PQ49A33 203 aa3.93□□□□□ -1.78
HERC1-208ENST00000560462 UBE2NLQ5JXB2 153 aa3.93□□□□□ -1.78
HERC1-208ENST00000560462 CCDC71LQ8N9Z2 235 aa3.93□□□□□ -1.78
HERC1-208ENST00000560462 DPH3Q96FX2 82 aa3.93□□□□□ -1.78
HERC1-208ENST00000560462 PPDPFQ9H3Y8 114 aa3.93□□□□□ -1.78
HERC1-208ENST00000560462 COMMD9Q9P000 198 aa3.93□□□□□ -1.78
HERC1-208ENST00000560462 ANAPC10Q9UM13 185 aa3.93□□□□□ -1.78
HERC1-208ENST00000560462 TRAV12-2A0A075B6T6 113 aa3.92□□□□□ -1.78
HERC1-208ENST00000560462 TRAV8-3A0A0A6YYJ7 113 aa3.92□□□□□ -1.78
HERC1-208ENST00000560462 I3L2K1 104 aa3.92□□□□□ -1.78
HERC1-208ENST00000560462 UPK2O00526 184 aa3.92□□□□□ -1.78
HERC1-208ENST00000560462 IGHV3-30P01768 117 aa3.92□□□□□ -1.78
HERC1-208ENST00000560462 IGHV3-33P01772 117 aa3.92□□□□□ -1.78
HERC1-208ENST00000560462 PMP2P02689 132 aa3.92□□□□□ -1.78
HERC1-208ENST00000560462 IGHV3-30-3P0DP02 117 aa3.92□□□□□ -1.78
HERC1-208ENST00000560462 IGHV3-30-5P0DP03 117 aa3.92□□□□□ -1.78
HERC1-208ENST00000560462 TAS2R46P59540 309 aa3.92□□□□□ -1.78
HERC1-208ENST00000560462 PLP1P60201 277 aa3.92□□□□□ -1.78
HERC1-208ENST00000560462 LSM3P62310 102 aaKnown RBP3.92□□□□□ -1.78
HERC1-208ENST00000560462 TIGITQ495A1 244 aa3.92□□□□□ -1.78
HERC1-208ENST00000560462 THOC7Q6I9Y2 204 aaKnown RBP3.92□□□□□ -1.78
HERC1-208ENST00000560462 BPIFCQ8NFQ6 507 aa3.92□□□□□ -1.78
HERC1-208ENST00000560462 OR5H2Q8NGV7 314 aa3.92□□□□□ -1.78
HERC1-208ENST00000560462 BLNKQ8WV28 456 aa3.92□□□□□ -1.78
HERC1-208ENST00000560462 BORCS5Q969J3 196 aa3.92□□□□□ -1.78
HERC1-208ENST00000560462 S100A16Q96FQ6 103 aaKnown RBP3.92□□□□□ -1.78
HERC1-208ENST00000560462 ZC2HC1AQ96GY0 325 aa3.92□□□□□ -1.78
HERC1-208ENST00000560462 ZNF2Q9BSG1 426 aaPredicted RBP3.92□□□□□ -1.78
HERC1-208ENST00000560462 GEMIN7Q9H840 131 aaKnown RBP3.92□□□□□ -1.78
HERC1-208ENST00000560462 DOK5Q9P104 306 aa3.92□□□□□ -1.78
HERC1-208ENST00000560462 PRO0255Q9UI72 69 aa3.92□□□□□ -1.78
HERC1-208ENST00000560462 CSDC2Q9Y534 153 aaKnown RBP3.92□□□□□ -1.78
HERC1-208ENST00000560462 A0A087WYN8 130 aa3.91□□□□□ -1.78
HERC1-208ENST00000560462 TEX50A0A1B0GTY4 177 aa3.91□□□□□ -1.78
HERC1-208ENST00000560462 A8MTW9 85 aa3.91□□□□□ -1.78
HERC1-208ENST00000560462 TRAPPC2P0DI81 140 aa3.91□□□□□ -1.78
HERC1-208ENST00000560462 TRAPPC2BP0DI82 140 aa3.91□□□□□ -1.78
HERC1-208ENST00000560462 F2RP25116 425 aa3.91□□□□□ -1.78
HERC1-208ENST00000560462 HRH1P35367 487 aa3.91□□□□□ -1.78
HERC1-208ENST00000560462 G6PCP35575 357 aa3.91□□□□□ -1.78
HERC1-208ENST00000560462 PSMB3P49720 205 aa3.91□□□□□ -1.78
HERC1-208ENST00000560462 RPL36AP83881 106 aaKnown RBP3.91□□□□□ -1.78
HERC1-208ENST00000560462 CIRBPQ14011 172 aaKnown RBP3.91□□□□□ -1.78
HERC1-208ENST00000560462 Q6ZTI0 123 aa3.91□□□□□ -1.78
HERC1-208ENST00000560462 OR1L8Q8NGR8 309 aa3.91□□□□□ -1.78
HERC1-208ENST00000560462 GTSF1Q8WW33 167 aa3.91□□□□□ -1.78
HERC1-208ENST00000560462 LSM10Q969L4 123 aaKnown RBP3.91□□□□□ -1.78
HERC1-208ENST00000560462 YIPF6Q96EC8 236 aa3.91□□□□□ -1.78
HERC1-208ENST00000560462 OCR1Q9BZK8 76 aa3.91□□□□□ -1.78
HERC1-208ENST00000560462 VCX3AQ9NNX9 186 aa3.91□□□□□ -1.78
HERC1-208ENST00000560462 A0A087WXM4 84 aa3.9□□□□□ -1.79
HERC1-208ENST00000560462 TRAV8-1A0A0A6YYK1 113 aa3.9□□□□□ -1.79
HERC1-208ENST00000560462 SMCO3A2RU48 225 aa3.9□□□□□ -1.79
HERC1-208ENST00000560462 H3BMQ9 156 aa3.9□□□□□ -1.79
HERC1-208ENST00000560462 GPR31O00270 319 aa3.9□□□□□ -1.79
HERC1-208ENST00000560462 PGLYRP1O75594 196 aaPredicted RBP3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 93.3 ms