RNA–Protein interactions for RNA: ENST00000559511.5

SPG11-217, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 2

Gene SPG11, Length 2,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-217ENST00000559511 ZANQ9Y493 2812 aa8.51□□□□□ -1.05
SPG11-217ENST00000559511 USP9YO00507 2555 aaPredicted RBP8.5□□□□□ -1.05
SPG11-217ENST00000559511 H3BUX3 64 aa8.5□□□□□ -1.05
SPG11-217ENST00000559511 ERCC8Q13216 396 aa8.5□□□□□ -1.05
SPG11-217ENST00000559511 Q6AWC8 147 aa8.5□□□□□ -1.05
SPG11-217ENST00000559511 CSPG4Q6UVK1 2322 aa8.5□□□□□ -1.05
SPG11-217ENST00000559511 PTPN13Q12923 2485 aa8.5□□□□□ -1.05
SPG11-217ENST00000559511 A0A1B0GV90 55 aa8.5□□□□□ -1.05
SPG11-217ENST00000559511 FBLL1A6NHQ2 334 aaKnown RBP8.5□□□□□ -1.05
SPG11-217ENST00000559511 C2orf70A6NJV1 201 aa8.5□□□□□ -1.05
SPG11-217ENST00000559511 FAM223BA6NKX1 122 aa8.5□□□□□ -1.05
SPG11-217ENST00000559511 TRGV3P03979 118 aa8.5□□□□□ -1.05
SPG11-217ENST00000559511 ZNF138P52744 262 aa8.5□□□□□ -1.05
SPG11-217ENST00000559511 LYZL1Q6UWQ5 148 aa8.5□□□□□ -1.05
SPG11-217ENST00000559511 ZNF575Q86XF7 245 aa8.5□□□□□ -1.05
SPG11-217ENST00000559511 FAM223AQ8IWN6 122 aa8.5□□□□□ -1.05
SPG11-217ENST00000559511 METTL26Q96S19 204 aa8.5□□□□□ -1.05
SPG11-217ENST00000559511 CLEC5AQ9NY25 188 aa8.5□□□□□ -1.05
SPG11-217ENST00000559511 TRAV8-2A0A0B4J237 113 aa8.49□□□□□ -1.05
SPG11-217ENST00000559511 IGHV1-24A0A0C4DH33 117 aa8.49□□□□□ -1.05
SPG11-217ENST00000559511 A6NDX4 124 aa8.49□□□□□ -1.05
SPG11-217ENST00000559511 TRBV12-3P01733 135 aa8.49□□□□□ -1.05
SPG11-217ENST00000559511 IGF1P05019 195 aa8.49□□□□□ -1.05
SPG11-217ENST00000559511 CTRLP40313 264 aa8.49□□□□□ -1.05
SPG11-217ENST00000559511 SSTP61278 116 aa8.49□□□□□ -1.05
SPG11-217ENST00000559511 SPATA12Q7Z6I5 190 aa8.49□□□□□ -1.05
SPG11-217ENST00000559511 CHCHD1Q96BP2 118 aaKnown RBP8.49□□□□□ -1.05
SPG11-217ENST00000559511 C2orf88Q9BSF0 95 aa8.49□□□□□ -1.05
SPG11-217ENST00000559511 SNHG12Q9BXW3 62 aa8.49□□□□□ -1.05
SPG11-217ENST00000559511 U3KQE9 123 aa8.49□□□□□ -1.05
SPG11-217ENST00000559511 MUC21A0A0G2JKD1 596 aa8.48□□□□□ -1.05
SPG11-217ENST00000559511 MUC21A0A140T8X8 626 aa8.48□□□□□ -1.05
SPG11-217ENST00000559511 A0A1B0GW15 77 aa8.48□□□□□ -1.05
SPG11-217ENST00000559511 TMEM213A2RRL7 107 aa8.48□□□□□ -1.05
SPG11-217ENST00000559511 LINC00614P0C842 121 aa8.48□□□□□ -1.05
SPG11-217ENST00000559511 GATA3P23771 443 aa8.48□□□□□ -1.05
SPG11-217ENST00000559511 MUC21Q5SSG8 566 aa8.48□□□□□ -1.05
SPG11-217ENST00000559511 Q6ZS46 218 aa8.48□□□□□ -1.05
SPG11-217ENST00000559511 ATOH7Q8N100 152 aa8.48□□□□□ -1.05
SPG11-217ENST00000559511 LINC01356Q8N9X3 169 aa8.48□□□□□ -1.05
SPG11-217ENST00000559511 MAPK1IP1LQ8NDC0 245 aa8.48□□□□□ -1.05
SPG11-217ENST00000559511 MIEN1Q9BRT3 115 aa8.48□□□□□ -1.05
SPG11-217ENST00000559511 SLC50A1Q9BRV3 221 aa8.48□□□□□ -1.05
SPG11-217ENST00000559511 A6NJY4 79 aa8.48□□□□□ -1.05
SPG11-217ENST00000559511 BLCAPP62952 87 aa8.48□□□□□ -1.05
SPG11-217ENST00000559511 SPATA45Q537H7 98 aa8.48□□□□□ -1.05
SPG11-217ENST00000559511 ZNF705AQ6ZN79 300 aaPredicted RBP8.48□□□□□ -1.05
SPG11-217ENST00000559511 ZNF493Q6ZR52 646 aa8.48□□□□□ -1.05
SPG11-217ENST00000559511 C8orf86Q6ZUL3 223 aa8.48□□□□□ -1.05
SPG11-217ENST00000559511 PSMG3-AS1Q96PY0 264 aa8.48□□□□□ -1.05
SPG11-217ENST00000559511 ABCA12Q86UK0 2595 aa8.48□□□□□ -1.05
SPG11-217ENST00000559511 IGHG2P01859 326 aa8.47□□□□□ -1.05
SPG11-217ENST00000559511 CSN3P07498 182 aa8.47□□□□□ -1.05
SPG11-217ENST00000559511 PPIFP30405 207 aaKnown RBP8.47□□□□□ -1.05
SPG11-217ENST00000559511 ARL3P36405 182 aa8.47□□□□□ -1.05
SPG11-217ENST00000559511 MAJINQ3KP22 176 aa8.47□□□□□ -1.05
SPG11-217ENST00000559511 LBHQ53QV2 105 aaPredicted RBP8.47□□□□□ -1.05
SPG11-217ENST00000559511 UNQ9165/PRO28630Q6UXU0 137 aa8.47□□□□□ -1.05
SPG11-217ENST00000559511 LINC00173Q6ZV60 143 aa8.47□□□□□ -1.05
SPG11-217ENST00000559511 IL17RELQ6ZVW7 336 aa8.47□□□□□ -1.05
SPG11-217ENST00000559511 ATP6V0BQ99437 205 aa8.47□□□□□ -1.05
SPG11-217ENST00000559511 PPP1R14DQ9NXH3 145 aa8.47□□□□□ -1.05
SPG11-217ENST00000559511 DOPEY2Q9Y3R5 2298 aa8.47□□□□□ -1.05
SPG11-217ENST00000559511 RBAKDNA6NC62 111 aa8.47□□□□□ -1.05
SPG11-217ENST00000559511 RAB4AP20338 218 aa8.47□□□□□ -1.05
SPG11-217ENST00000559511 BMI1P35226 326 aa8.47□□□□□ -1.05
SPG11-217ENST00000559511 KLK15Q9H2R5 256 aa8.47□□□□□ -1.05
SPG11-217ENST00000559511 RNF223E7ERA6 249 aa8.46□□□□□ -1.06
SPG11-217ENST00000559511 IGLC6P0CF74 106 aa8.46□□□□□ -1.06
SPG11-217ENST00000559511 LOXL1Q08397 574 aaPredicted RBP8.46□□□□□ -1.06
SPG11-217ENST00000559511 DEFB113Q30KQ7 82 aa8.46□□□□□ -1.06
SPG11-217ENST00000559511 AMN1Q8IY45 258 aa8.46□□□□□ -1.06
SPG11-217ENST00000559511 AGPAT4-IT1Q9H0P7 198 aa8.46□□□□□ -1.06
SPG11-217ENST00000559511 BEX4Q9NWD9 120 aaPredicted RBP8.46□□□□□ -1.06
SPG11-217ENST00000559511 SMAD7O15105 426 aaKnown RBP8.45□□□□□ -1.06
SPG11-217ENST00000559511 IGHV3-11P01762 117 aa8.45□□□□□ -1.06
SPG11-217ENST00000559511 ORM1P02763 201 aa8.45□□□□□ -1.06
SPG11-217ENST00000559511 LCNL1Q6ZST4 164 aa8.45□□□□□ -1.06
SPG11-217ENST00000559511 FER1L6-AS1Q8NA97 138 aa8.45□□□□□ -1.06
SPG11-217ENST00000559511 GLMPQ8WWB7 406 aa8.45□□□□□ -1.06
SPG11-217ENST00000559511 TMEM70Q9BUB7 260 aa8.45□□□□□ -1.06
SPG11-217ENST00000559511 TENM4Q6N022 2769 aa8.45□□□□□ -1.06
SPG11-217ENST00000559511 PRRC2AP48634 2157 aaKnown RBP8.45□□□□□ -1.06
SPG11-217ENST00000559511 FABP5P3A8MUU1 101 aa8.45□□□□□ -1.06
SPG11-217ENST00000559511 D6R8Y8 96 aa8.45□□□□□ -1.06
SPG11-217ENST00000559511 M0R143 59 aa8.45□□□□□ -1.06
SPG11-217ENST00000559511 TGFAP01135 160 aa8.45□□□□□ -1.06
SPG11-217ENST00000559511 RPS20P60866 119 aaKnown RBP8.45□□□□□ -1.06
SPG11-217ENST00000559511 SRSF2Q01130 221 aaKnown RBP8.45□□□□□ -1.06
SPG11-217ENST00000559511 FAM104BQ5XKR9 115 aa8.45□□□□□ -1.06
SPG11-217ENST00000559511 APCP25054 2843 aa8.44□□□□□ -1.06
SPG11-217ENST00000559511 MXRA5Q9NR99 2828 aa8.44□□□□□ -1.06
SPG11-217ENST00000559511 J3QLI3 93 aa8.44□□□□□ -1.06
SPG11-217ENST00000559511 CRXO43186 299 aaPredicted RBP8.44□□□□□ -1.06
SPG11-217ENST00000559511 LEPROTL1O95214 131 aa8.44□□□□□ -1.06
SPG11-217ENST00000559511 BRI3O95415 125 aa8.44□□□□□ -1.06
SPG11-217ENST00000559511 LRRC75A-AS1Q8N1F1 130 aa8.44□□□□□ -1.06
SPG11-217ENST00000559511 MRPL53Q96EL3 112 aaKnown RBP8.44□□□□□ -1.06
SPG11-217ENST00000559511 U3KQK5 164 aa8.44□□□□□ -1.06
SPG11-217ENST00000559511 H3BUA1 57 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms