RNA–Protein interactions for RNA: ENST00000559276.5

USP3-212, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-212ENST00000559276 FAM167A-AS1Q96KT0 104 aa4.53□□□□□ -1.68
USP3-212ENST00000559276 PRR25Q96S07 402 aa4.53□□□□□ -1.68
USP3-212ENST00000559276 NDFIP1Q9BT67 221 aa4.53□□□□□ -1.68
USP3-212ENST00000559276 RNASE7Q9H1E1 156 aaKnown RBP4.53□□□□□ -1.68
USP3-212ENST00000559276 ZNF430Q9H8G1 570 aaPredicted RBP4.53□□□□□ -1.68
USP3-212ENST00000559276 PGPEP1Q9NXJ5 209 aa4.53□□□□□ -1.68
USP3-212ENST00000559276 HSPB8Q9UJY1 196 aa4.53□□□□□ -1.68
USP3-212ENST00000559276 IGHV3-43A0A0B4J1X8 118 aa4.52□□□□□ -1.69
USP3-212ENST00000559276 IGHV3-72A0A0B4J1Y9 119 aa4.52□□□□□ -1.69
USP3-212ENST00000559276 IGHV1-3A0A0C4DH29 117 aa4.52□□□□□ -1.69
USP3-212ENST00000559276 SYS1-DBNDD2H3BUS1 97 aa4.52□□□□□ -1.69
USP3-212ENST00000559276 CCL24O00175 119 aa4.52□□□□□ -1.69
USP3-212ENST00000559276 CORTO00230 105 aa4.52□□□□□ -1.69
USP3-212ENST00000559276 CCL25O15444 150 aa4.52□□□□□ -1.69
USP3-212ENST00000559276 COX7A2P2O60397 106 aa4.52□□□□□ -1.69
USP3-212ENST00000559276 APOA2P02652 100 aa4.52□□□□□ -1.69
USP3-212ENST00000559276 SAA2P0DJI9 122 aaPredicted RBP4.52□□□□□ -1.69
USP3-212ENST00000559276 IGHV3-43DP0DP04 118 aa4.52□□□□□ -1.69
USP3-212ENST00000559276 RNASE2P10153 161 aaKnown RBP4.52□□□□□ -1.69
USP3-212ENST00000559276 MGST1P10620 155 aaKnown RBP4.52□□□□□ -1.69
USP3-212ENST00000559276 NTF3P20783 257 aa4.52□□□□□ -1.69
USP3-212ENST00000559276 TFPI2P48307 235 aa4.52□□□□□ -1.69
USP3-212ENST00000559276 ZNF134P52741 427 aa4.52□□□□□ -1.69
USP3-212ENST00000559276 RPS16P62249 146 aaKnown RBP4.52□□□□□ -1.69
USP3-212ENST00000559276 SEC11AP67812 179 aa4.52□□□□□ -1.69
USP3-212ENST00000559276 HIST1H1AQ02539 215 aaPredicted RBP4.52□□□□□ -1.69
USP3-212ENST00000559276 SLAQ13239 276 aa4.52□□□□□ -1.69
USP3-212ENST00000559276 FHL3Q13643 280 aa4.52□□□□□ -1.69
USP3-212ENST00000559276 TNXAQ16473 311 aa4.52□□□□□ -1.69
USP3-212ENST00000559276 LTC4SQ16873 150 aa4.52□□□□□ -1.69
USP3-212ENST00000559276 RPL39P5Q59GN2 51 aa4.52□□□□□ -1.69
USP3-212ENST00000559276 CT45A1Q5HYN5 189 aa4.52□□□□□ -1.69
USP3-212ENST00000559276 ASPHD1Q5U4P2 390 aa4.52□□□□□ -1.69
USP3-212ENST00000559276 SLC25A34Q6PIV7 304 aa4.52□□□□□ -1.69
USP3-212ENST00000559276 RBPMS2Q6ZRY4 209 aaKnown RBP4.52□□□□□ -1.69
USP3-212ENST00000559276 SLC25A48Q6ZT89 311 aaKnown RBP4.52□□□□□ -1.69
USP3-212ENST00000559276 PDPNQ86YL7 162 aa4.52□□□□□ -1.69
USP3-212ENST00000559276 DEFB125Q8N687 156 aa4.52□□□□□ -1.69
USP3-212ENST00000559276 GATD1Q8NB37 220 aa4.52□□□□□ -1.69
USP3-212ENST00000559276 NUP35Q8NFH5 326 aa4.52□□□□□ -1.69
USP3-212ENST00000559276 OR10X1Q8NGY0 326 aa4.52□□□□□ -1.69
USP3-212ENST00000559276 CT45A3Q8NHU0 189 aa4.52□□□□□ -1.69
USP3-212ENST00000559276 MYOZ3Q8TDC0 251 aa4.52□□□□□ -1.69
USP3-212ENST00000559276 GPR82Q96P67 336 aa4.52□□□□□ -1.69
USP3-212ENST00000559276 PAXXQ9BUH6 204 aa4.52□□□□□ -1.69
USP3-212ENST00000559276 MCRIP2Q9BUT9 160 aaKnown RBP4.52□□□□□ -1.69
USP3-212ENST00000559276 SLC25A2Q9BXI2 301 aa4.52□□□□□ -1.69
USP3-212ENST00000559276 RPP21Q9H633 154 aaKnown RBP4.52□□□□□ -1.69
USP3-212ENST00000559276 RNF24Q9Y225 148 aa4.52□□□□□ -1.69
USP3-212ENST00000559276 U3KQK5 164 aa4.52□□□□□ -1.69
USP3-212ENST00000559276 STARD9Q9P2P6 4700 aa4.52□□□□□ -1.69
USP3-212ENST00000559276 TENM2Q9NT68 2774 aa4.52□□□□□ -1.69
USP3-212ENST00000559276 DNAH1Q9P2D7 4330 aa4.51□□□□□ -1.69
USP3-212ENST00000559276 TRAV3A0A0B4J244 114 aa4.51□□□□□ -1.69
USP3-212ENST00000559276 OR4C46A6NHA9 309 aa4.51□□□□□ -1.69
USP3-212ENST00000559276 SRRM4A7MD48 611 aaKnown RBP4.51□□□□□ -1.69
USP3-212ENST00000559276 HIGD1CA8MV81 97 aa4.51□□□□□ -1.69
USP3-212ENST00000559276 NPIPB6E9PJ23 425 aa4.51□□□□□ -1.69
USP3-212ENST00000559276 K7ERU9 68 aa4.51□□□□□ -1.69
USP3-212ENST00000559276 ACTL6BO94805 426 aa4.51□□□□□ -1.69
USP3-212ENST00000559276 IGHG4P01861 327 aa4.51□□□□□ -1.69
USP3-212ENST00000559276 NHLRC4P0CG21 123 aaPredicted RBP4.51□□□□□ -1.69
USP3-212ENST00000559276 HINT1P49773 126 aaPredicted RBP4.51□□□□□ -1.69
USP3-212ENST00000559276 TCL1AP56279 114 aa4.51□□□□□ -1.69
USP3-212ENST00000559276 PLP1P60201 277 aa4.51□□□□□ -1.69
USP3-212ENST00000559276 HES1Q14469 280 aa4.51□□□□□ -1.69
USP3-212ENST00000559276 FXYD3Q14802 87 aa4.51□□□□□ -1.69
USP3-212ENST00000559276 TMEM177Q53S58 311 aa4.51□□□□□ -1.69
USP3-212ENST00000559276 C10orf113Q5VZT2 155 aa4.51□□□□□ -1.69
USP3-212ENST00000559276 PVRIGQ6DKI7 326 aa4.51□□□□□ -1.69
USP3-212ENST00000559276 EBLN2Q6P2I7 272 aa4.51□□□□□ -1.69
USP3-212ENST00000559276 RNASEKQ6P5S7 137 aaKnown RBP4.51□□□□□ -1.69
USP3-212ENST00000559276 ZNF833PQ6ZTB9 187 aa4.51□□□□□ -1.69
USP3-212ENST00000559276 LINC00311Q8N616 119 aa4.51□□□□□ -1.69
USP3-212ENST00000559276 C5orf17Q8NAS9 161 aa4.51□□□□□ -1.69
USP3-212ENST00000559276 NUDT10Q8NFP7 164 aa4.51□□□□□ -1.69
USP3-212ENST00000559276 TMEM167AQ8TBQ9 72 aa4.51□□□□□ -1.69
USP3-212ENST00000559276 NUDT11Q96G61 164 aa4.51□□□□□ -1.69
USP3-212ENST00000559276 RITA1Q96K30 269 aa4.51□□□□□ -1.69
USP3-212ENST00000559276 ASCL2Q99929 193 aa4.51□□□□□ -1.69
USP3-212ENST00000559276 MLST8Q9BVC4 326 aa4.51□□□□□ -1.69
USP3-212ENST00000559276 MAP1LC3CQ9BXW4 147 aa4.51□□□□□ -1.69
USP3-212ENST00000559276 KLK15Q9H2R5 256 aa4.51□□□□□ -1.69
USP3-212ENST00000559276 NDUFA4L2Q9NRX3 87 aa4.51□□□□□ -1.69
USP3-212ENST00000559276 ZNF355PQ9NSJ1 428 aa4.51□□□□□ -1.69
USP3-212ENST00000559276 PEF1Q9UBV8 284 aaKnown RBP4.51□□□□□ -1.69
USP3-212ENST00000559276 EPDR1Q9UM22 224 aa4.51□□□□□ -1.69
USP3-212ENST00000559276 HYDINQ4G0P3 5121 aa4.5□□□□□ -1.69
USP3-212ENST00000559276 IGKV1OR2-108A0A075B7D4 117 aa4.5□□□□□ -1.69
USP3-212ENST00000559276 TEX50A0A1B0GTY4 177 aa4.5□□□□□ -1.69
USP3-212ENST00000559276 C19orf71A6NCJ1 209 aa4.5□□□□□ -1.69
USP3-212ENST00000559276 LEPROTL1O95214 131 aa4.5□□□□□ -1.69
USP3-212ENST00000559276 LTAP01374 205 aa4.5□□□□□ -1.69
USP3-212ENST00000559276 P01737 135 aa4.5□□□□□ -1.69
USP3-212ENST00000559276 IGF1P05019 195 aa4.5□□□□□ -1.69
USP3-212ENST00000559276 PSMB8P28062 276 aa4.5□□□□□ -1.69
USP3-212ENST00000559276 PPIFP30405 207 aaKnown RBP4.5□□□□□ -1.69
USP3-212ENST00000559276 CSN1S1P47710 185 aa4.5□□□□□ -1.69
USP3-212ENST00000559276 ZNF137PP52743 207 aa4.5□□□□□ -1.69
USP3-212ENST00000559276 FOXA3P55318 350 aaPredicted RBP4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms