RNA–Protein interactions for RNA: ENST00000552770.2

CEP290-206, Transcript of centrosomal protein 290, humanhuman

TSL 3

Gene CEP290, Length 1,285 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290-206ENST00000552770 C10orf111Q8N326 155 aa0.71□□□□□ -2.3
CEP290-206ENST00000552770 C5orf17Q8NAS9 161 aa0.71□□□□□ -2.3
CEP290-206ENST00000552770 AP1S3Q96PC3 154 aa0.71□□□□□ -2.3
CEP290-206ENST00000552770 C10orf95Q9H7T3 257 aa0.71□□□□□ -2.3
CEP290-206ENST00000552770 NIT2Q9NQR4 276 aa0.71□□□□□ -2.3
CEP290-206ENST00000552770 ASH1LQ9NR48 2969 aaKnown RBP0.71□□□□□ -2.3
CEP290-206ENST00000552770 TECPR2O15040 1411 aa0.71□□□□□ -2.3
CEP290-206ENST00000552770 N4BP2Q86UW6 1770 aaPredicted RBP0.7□□□□□ -2.3
CEP290-206ENST00000552770 MYH3P11055 1940 aa0.7□□□□□ -2.3
CEP290-206ENST00000552770 SPTBP11277 2137 aa0.7□□□□□ -2.3
CEP290-206ENST00000552770 PDE6GP18545 87 aa0.7□□□□□ -2.3
CEP290-206ENST00000552770 G0S2P27469 103 aa0.7□□□□□ -2.3
CEP290-206ENST00000552770 FXYD4P59646 89 aa0.7□□□□□ -2.3
CEP290-206ENST00000552770 CCSMST1Q4G0I0 132 aa0.7□□□□□ -2.3
CEP290-206ENST00000552770 CASC2Q6XLA1 102 aa0.7□□□□□ -2.3
CEP290-206ENST00000552770 STX12Q86Y82 276 aa0.7□□□□□ -2.3
CEP290-206ENST00000552770 OR5H6Q8NGV6 325 aa0.7□□□□□ -2.3
CEP290-206ENST00000552770 CARD19Q96LW7 228 aa0.7□□□□□ -2.3
CEP290-206ENST00000552770 PRELID3AQ96N28 172 aa0.7□□□□□ -2.3
CEP290-206ENST00000552770 APCP25054 2843 aa0.7□□□□□ -2.3
CEP290-206ENST00000552770 FANCMQ8IYD8 2048 aa0.69□□□□□ -2.3
CEP290-206ENST00000552770 IGHV3-30P01768 117 aa0.69□□□□□ -2.3
CEP290-206ENST00000552770 CD14P08571 375 aa0.69□□□□□ -2.3
CEP290-206ENST00000552770 IGHV3-30-5P0DP03 117 aa0.69□□□□□ -2.3
CEP290-206ENST00000552770 LSM3P62310 102 aaKnown RBP0.69□□□□□ -2.3
CEP290-206ENST00000552770 LXNQ9BS40 222 aa0.69□□□□□ -2.3
CEP290-206ENST00000552770 JPT1Q9UK76 154 aa0.69□□□□□ -2.3
CEP290-206ENST00000552770 KNTC1P50748 2209 aa0.68□□□□□ -2.3
CEP290-206ENST00000552770 A0A1B0GV72 72 aa0.68□□□□□ -2.3
CEP290-206ENST00000552770 GABARAPH6UMI1 98 aa0.68□□□□□ -2.3
CEP290-206ENST00000552770 CCL4P13236 92 aa0.68□□□□□ -2.3
CEP290-206ENST00000552770 MAXP61244 160 aa0.68□□□□□ -2.3
CEP290-206ENST00000552770 IZUMO2Q6UXV1 221 aa0.68□□□□□ -2.3
CEP290-206ENST00000552770 RMND5BQ96G75 393 aaPredicted RBP0.68□□□□□ -2.3
CEP290-206ENST00000552770 CIB3Q96Q77 187 aaPredicted RBP0.68□□□□□ -2.3
CEP290-206ENST00000552770 BCL9O00512 1426 aa0.67□□□□□ -2.3
CEP290-206ENST00000552770 USP24Q9UPU5 2620 aa0.67□□□□□ -2.3
CEP290-206ENST00000552770 TRBV27A0A0K0K1C4 114 aa0.67□□□□□ -2.3
CEP290-206ENST00000552770 A0A1W2PRE2 83 aa0.67□□□□□ -2.3
CEP290-206ENST00000552770 SULT1C4O75897 302 aa0.67□□□□□ -2.3
CEP290-206ENST00000552770 S100A11P31949 105 aa0.67□□□□□ -2.3
CEP290-206ENST00000552770 TFAMQ00059 246 aaKnown RBP0.67□□□□□ -2.3
CEP290-206ENST00000552770 LINC00305Q7Z4B0 112 aa0.67□□□□□ -2.3
CEP290-206ENST00000552770 TRBV7-6A0A0J9YX20 115 aa0.66□□□□□ -2.3
CEP290-206ENST00000552770 ARL5CA6NH57 179 aa0.66□□□□□ -2.3
CEP290-206ENST00000552770 DNAJB13P59910 316 aa0.66□□□□□ -2.3
CEP290-206ENST00000552770 RPL37AP61513 92 aaKnown RBP0.66□□□□□ -2.3
CEP290-206ENST00000552770 NEDD8Q15843 81 aa0.66□□□□□ -2.3
CEP290-206ENST00000552770 TOMM20LQ6UXN7 152 aa0.66□□□□□ -2.3
CEP290-206ENST00000552770 ZCCHC23Q6ZST2 131 aa0.66□□□□□ -2.3
CEP290-206ENST00000552770 TMEM229BQ8NBD8 167 aa0.66□□□□□ -2.3
CEP290-206ENST00000552770 THEM6Q8WUY1 208 aa0.66□□□□□ -2.3
CEP290-206ENST00000552770 C19orf12Q9NSK7 152 aa0.66□□□□□ -2.3
CEP290-206ENST00000552770 SMPXQ9UHP9 88 aa0.66□□□□□ -2.3
CEP290-206ENST00000552770 TRAV16A0A0A6YYK6 109 aaPredicted RBP0.65□□□□□ -2.31
CEP290-206ENST00000552770 C3orf85A0A1B0GTC6 90 aa0.65□□□□□ -2.31
CEP290-206ENST00000552770 LOC107986453A0A1B0GWG9 222 aa0.65□□□□□ -2.31
CEP290-206ENST00000552770 BBIP1A8MTZ0 92 aa0.65□□□□□ -2.31
CEP290-206ENST00000552770 H7BYZ3 331 aa0.65□□□□□ -2.31
CEP290-206ENST00000552770 PGRMC1O00264 195 aaKnown RBP0.65□□□□□ -2.31
CEP290-206ENST00000552770 GYPBP06028 91 aa0.65□□□□□ -2.31
CEP290-206ENST00000552770 OR9Q1Q8NGQ5 310 aa0.65□□□□□ -2.31
CEP290-206ENST00000552770 MED31Q9Y3C7 131 aa0.65□□□□□ -2.31
CEP290-206ENST00000552770 NAV3Q8IVL0 2385 aa0.64□□□□□ -2.31
CEP290-206ENST00000552770 PTPRDP23468 1912 aa0.64□□□□□ -2.31
CEP290-206ENST00000552770 TRAV13-1A0A0B4J241 112 aa0.64□□□□□ -2.31
CEP290-206ENST00000552770 H3BMG7 143 aa0.64□□□□□ -2.31
CEP290-206ENST00000552770 C10orf99Q6UWK7 81 aa0.64□□□□□ -2.31
CEP290-206ENST00000552770 TCTEX1D1Q8N7M0 179 aa0.64□□□□□ -2.31
CEP290-206ENST00000552770 MORN4Q8NDC4 146 aa0.64□□□□□ -2.31
CEP290-206ENST00000552770 CLEC2BQ92478 149 aa0.64□□□□□ -2.31
CEP290-206ENST00000552770 CCL19Q99731 98 aa0.64□□□□□ -2.31
CEP290-206ENST00000552770 TAF9BQ9HBM6 251 aa0.64□□□□□ -2.31
CEP290-206ENST00000552770 MPC1Q9Y5U8 109 aa0.64□□□□□ -2.31
CEP290-206ENST00000552770 NUP210Q8TEM1 1887 aaPredicted RBP0.63□□□□□ -2.31
CEP290-206ENST00000552770 TCOF1Q13428 1488 aaKnown RBP0.63□□□□□ -2.31
CEP290-206ENST00000552770 A0A0D9SG42 100 aa0.63□□□□□ -2.31
CEP290-206ENST00000552770 NUPR2A6NF83 97 aa0.63□□□□□ -2.31
CEP290-206ENST00000552770 IFITM5A6NNB3 132 aa0.63□□□□□ -2.31
CEP290-206ENST00000552770 IFNA21P01568 189 aa0.63□□□□□ -2.31
CEP290-206ENST00000552770 FABP1P07148 127 aa0.63□□□□□ -2.31
CEP290-206ENST00000552770 ZNF137PP52743 207 aa0.63□□□□□ -2.31
CEP290-206ENST00000552770 CAV3P56539 151 aa0.63□□□□□ -2.31
CEP290-206ENST00000552770 C3orf62Q6ZUJ4 267 aa0.63□□□□□ -2.31
CEP290-206ENST00000552770 LIMD2Q9BT23 127 aa0.63□□□□□ -2.31
CEP290-206ENST00000552770 DLC1Q96QB1 1528 aa0.63□□□□□ -2.31
CEP290-206ENST00000552770 A0A1W2PPB8 328 aa0.62□□□□□ -2.31
CEP290-206ENST00000552770 A0A1W2PRS3 328 aa0.62□□□□□ -2.31
CEP290-206ENST00000552770 KIR3DP1A8MWS1 328 aa0.62□□□□□ -2.31
CEP290-206ENST00000552770 ETV6P41212 452 aa0.62□□□□□ -2.31
CEP290-206ENST00000552770 SPINT3P49223 89 aa0.62□□□□□ -2.31
CEP290-206ENST00000552770 POLR2HP52434 150 aaKnown RBP0.62□□□□□ -2.31
CEP290-206ENST00000552770 Q86TA4 180 aa0.62□□□□□ -2.31
CEP290-206ENST00000552770 DDA1Q9BW61 102 aa0.62□□□□□ -2.31
CEP290-206ENST00000552770 PLAC8Q9NZF1 115 aa0.62□□□□□ -2.31
CEP290-206ENST00000552770 ANKRD31Q8N7Z5 1873 aa0.61□□□□□ -2.31
CEP290-206ENST00000552770 MUC5ACP98088 5654 aa0.61□□□□□ -2.31
CEP290-206ENST00000552770 RPS3P23396 243 aaKnown RBP eCLIP0.61□□□□□ -2.31
CEP290-206ENST00000552770 SPINK7P58062 85 aa0.61□□□□□ -2.31
CEP290-206ENST00000552770 XAF1Q6GPH4 301 aa0.61□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms