RNA–Protein interactions for RNA: ENST00000550436.4

SVOP-203, Transcript of SV2 related protein, humanhuman

TSL 4

Gene SVOP, Length 695 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVOP-203ENST00000550436 ZNF705GA8MUZ8 300 aaPredicted RBP10.54□□□□□ -0.72
SVOP-203ENST00000550436 RRN3P1Q2M238 152 aa10.54□□□□□ -0.72
SVOP-203ENST00000550436 SPATA12Q7Z6I5 190 aa10.54□□□□□ -0.72
SVOP-203ENST00000550436 EXOC3-AS1Q8N2X6 119 aa10.54□□□□□ -0.72
SVOP-203ENST00000550436 OR2T35Q8NGX2 323 aa10.54□□□□□ -0.72
SVOP-203ENST00000550436 OR10J6PQ8NGY7 276 aa10.54□□□□□ -0.72
SVOP-203ENST00000550436 ASB13Q8WXK3 278 aa10.54□□□□□ -0.72
SVOP-203ENST00000550436 ZNF503Q96F45 646 aa10.54□□□□□ -0.72
SVOP-203ENST00000550436 ATG101Q9BSB4 218 aa10.54□□□□□ -0.72
SVOP-203ENST00000550436 PAXXQ9BUH6 204 aa10.54□□□□□ -0.72
SVOP-203ENST00000550436 TEX48A0A1B0GUV7 120 aa10.53□□□□□ -0.72
SVOP-203ENST00000550436 OR7C2O60412 319 aa10.53□□□□□ -0.72
SVOP-203ENST00000550436 NBEAP1P0C6P0 100 aa10.53□□□□□ -0.72
SVOP-203ENST00000550436 RAB2AP61019 212 aa10.53□□□□□ -0.72
SVOP-203ENST00000550436 PDE6HQ13956 83 aa10.53□□□□□ -0.72
SVOP-203ENST00000550436 KIR3DS1Q14943 382 aa10.53□□□□□ -0.72
SVOP-203ENST00000550436 HSD17B11Q8NBQ5 300 aa10.53□□□□□ -0.72
SVOP-203ENST00000550436 RNF141Q8WVD5 230 aa10.53□□□□□ -0.72
SVOP-203ENST00000550436 FXYD5Q96DB9 178 aa10.53□□□□□ -0.72
SVOP-203ENST00000550436 MRPL53Q96EL3 112 aaKnown RBP10.53□□□□□ -0.72
SVOP-203ENST00000550436 RNF222A6NCQ9 220 aa10.52□□□□□ -0.73
SVOP-203ENST00000550436 NPIPB6E9PJ23 425 aa10.52□□□□□ -0.73
SVOP-203ENST00000550436 G3V3Q6 166 aa10.52□□□□□ -0.73
SVOP-203ENST00000550436 NUDT3O95989 172 aa10.52□□□□□ -0.73
SVOP-203ENST00000550436 DEFB130BP0DP73 79 aa10.52□□□□□ -0.73
SVOP-203ENST00000550436 DEFB130AP0DP74 79 aa10.52□□□□□ -0.73
SVOP-203ENST00000550436 CDKN1BP46527 198 aa10.52□□□□□ -0.73
SVOP-203ENST00000550436 KRTAP10-2P60368 255 aa10.52□□□□□ -0.73
SVOP-203ENST00000550436 ZNF266Q14584 549 aa10.52□□□□□ -0.73
SVOP-203ENST00000550436 ICAM4Q14773 271 aa10.52□□□□□ -0.73
SVOP-203ENST00000550436 PHYHIPLQ96FC7 376 aa10.52□□□□□ -0.73
SVOP-203ENST00000550436 LINC00588Q9Y4M8 146 aa10.52□□□□□ -0.73
SVOP-203ENST00000550436 DMBT1Q9UGM3 2413 aaPredicted RBP10.51□□□□□ -0.73
SVOP-203ENST00000550436 J3KRW8 73 aa10.51□□□□□ -0.73
SVOP-203ENST00000550436 CT45A10P0DMU9 189 aa10.51□□□□□ -0.73
SVOP-203ENST00000550436 M6PRP20645 277 aa10.51□□□□□ -0.73
SVOP-203ENST00000550436 UBE2L3P68036 154 aaKnown RBP10.51□□□□□ -0.73
SVOP-203ENST00000550436 ERCC8Q13216 396 aa10.51□□□□□ -0.73
SVOP-203ENST00000550436 ACOT6Q3I5F7 207 aaPredicted RBP10.51□□□□□ -0.73
SVOP-203ENST00000550436 FAM122CQ6P4D5 195 aa10.51□□□□□ -0.73
SVOP-203ENST00000550436 C15orf53Q8NAA6 179 aa10.51□□□□□ -0.73
SVOP-203ENST00000550436 INO80EQ8NBZ0 244 aaPredicted RBP10.51□□□□□ -0.73
SVOP-203ENST00000550436 KRTAP1-5Q9BYS1 174 aa10.51□□□□□ -0.73
SVOP-203ENST00000550436 AAMDCQ9H7C9 122 aa10.51□□□□□ -0.73
SVOP-203ENST00000550436 TNFSF18Q9UNG2 199 aa10.51□□□□□ -0.73
SVOP-203ENST00000550436 PRELID1Q9Y255 219 aa10.51□□□□□ -0.73
SVOP-203ENST00000550436 IGKV2-40A0A087WW87 121 aaPredicted RBP10.5□□□□□ -0.73
SVOP-203ENST00000550436 F5H768 121 aa10.5□□□□□ -0.73
SVOP-203ENST00000550436 SMLR1H3BR10 107 aa10.5□□□□□ -0.73
SVOP-203ENST00000550436 IGKV2D-40P01614 121 aaPredicted RBP10.5□□□□□ -0.73
SVOP-203ENST00000550436 AZU1P20160 251 aa10.5□□□□□ -0.73
SVOP-203ENST00000550436 ATP6V0CP27449 155 aa10.5□□□□□ -0.73
SVOP-203ENST00000550436 FAM3BP58499 235 aaPredicted RBP10.5□□□□□ -0.73
SVOP-203ENST00000550436 TAS2R45P59539 299 aa10.5□□□□□ -0.73
SVOP-203ENST00000550436 KHDC3LQ587J8 217 aa10.5□□□□□ -0.73
SVOP-203ENST00000550436 LINC01587Q99440 93 aa10.5□□□□□ -0.73
SVOP-203ENST00000550436 FAT1Q14517 4588 aa10.5□□□□□ -0.73
SVOP-203ENST00000550436 A0A1W2PPV4 95 aa10.49□□□□□ -0.73
SVOP-203ENST00000550436 HMGB3O15347 200 aaKnown RBP10.49□□□□□ -0.73
SVOP-203ENST00000550436 HTN1P15515 57 aa10.49□□□□□ -0.73
SVOP-203ENST00000550436 TSPOP30536 169 aa10.49□□□□□ -0.73
SVOP-203ENST00000550436 RANP62826 216 aaKnown RBP10.49□□□□□ -0.73
SVOP-203ENST00000550436 GFI1BQ5VTD9 330 aa10.49□□□□□ -0.73
SVOP-203ENST00000550436 RPL7L1Q6DKI1 246 aaKnown RBP10.49□□□□□ -0.73
SVOP-203ENST00000550436 OR10G4Q8NGN3 311 aa10.49□□□□□ -0.73
SVOP-203ENST00000550436 OR10G9Q8NGN4 311 aa10.49□□□□□ -0.73
SVOP-203ENST00000550436 OR10G7Q8NGN6 311 aa10.49□□□□□ -0.73
SVOP-203ENST00000550436 SH3BGRL3Q9H299 93 aa10.49□□□□□ -0.73
SVOP-203ENST00000550436 PLAC8L1A1L4L8 177 aa10.48□□□□□ -0.73
SVOP-203ENST00000550436 LEPP41159 167 aa10.48□□□□□ -0.73
SVOP-203ENST00000550436 TMEM256Q8N2U0 113 aa10.48□□□□□ -0.73
SVOP-203ENST00000550436 OR2G3Q8NGZ4 309 aa10.48□□□□□ -0.73
SVOP-203ENST00000550436 ODF3Q96PU9 254 aa10.48□□□□□ -0.73
SVOP-203ENST00000550436 AGPAT4-IT1Q9H0P7 198 aa10.48□□□□□ -0.73
SVOP-203ENST00000550436 Q9H3A6 140 aa10.48□□□□□ -0.73
SVOP-203ENST00000550436 ARPC5O15511 151 aa10.47□□□□□ -0.73
SVOP-203ENST00000550436 FUSP35637 526 aaKnown RBP eCLIP10.47□□□□□ -0.73
SVOP-203ENST00000550436 TAS2R60P59551 318 aa10.47□□□□□ -0.73
SVOP-203ENST00000550436 VGLL1Q99990 258 aa10.47□□□□□ -0.73
SVOP-203ENST00000550436 PSMG3Q9BT73 122 aaPredicted RBP10.47□□□□□ -0.73
SVOP-203ENST00000550436 TRAV12-3A0A0B4J271 114 aa10.46□□□□□ -0.73
SVOP-203ENST00000550436 H7BYZ3 331 aa10.46□□□□□ -0.73
SVOP-203ENST00000550436 CDC34P49427 236 aaPredicted RBP10.46□□□□□ -0.73
SVOP-203ENST00000550436 LINC00477Q96M19 166 aa10.46□□□□□ -0.73
SVOP-203ENST00000550436 BORCS7-ASMTA0A0B4J1R7 106 aa10.45□□□□□ -0.74
SVOP-203ENST00000550436 LYRM9A8MSI8 78 aa10.45□□□□□ -0.74
SVOP-203ENST00000550436 CCL18P55774 89 aa10.45□□□□□ -0.74
SVOP-203ENST00000550436 PQLC2Q6ZP29 291 aa10.45□□□□□ -0.74
SVOP-203ENST00000550436 C9orf47Q6ZRZ4 202 aa10.45□□□□□ -0.74
SVOP-203ENST00000550436 SSX7Q7RTT5 188 aa10.45□□□□□ -0.74
SVOP-203ENST00000550436 LYPD1Q8N2G4 141 aa10.45□□□□□ -0.74
SVOP-203ENST00000550436 FAM19A4Q96LR4 140 aa10.45□□□□□ -0.74
SVOP-203ENST00000550436 C20orf144Q9BQM9 153 aa10.45□□□□□ -0.74
SVOP-203ENST00000550436 FLG2Q5D862 2391 aaPredicted RBP10.45□□□□□ -0.74
SVOP-203ENST00000550436 ARL14EPLP0DKL9 152 aa10.44□□□□□ -0.74
SVOP-203ENST00000550436 CSN1S1P47710 185 aa10.44□□□□□ -0.74
SVOP-203ENST00000550436 SERF2P84101 59 aa10.44□□□□□ -0.74
SVOP-203ENST00000550436 CD300CQ08708 224 aa10.44□□□□□ -0.74
SVOP-203ENST00000550436 BTN1A1Q13410 526 aa10.44□□□□□ -0.74
SVOP-203ENST00000550436 TMEM78Q5T7P6 136 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms