RNA–Protein interactions for RNA: ENST00000542188.5

TRPM1-203, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRPM1, Length 6,004 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-203ENST00000542188 ADAMTSL1Q8N6G6 1762 aa11.28□□□□□ -0.6
TRPM1-203ENST00000542188 IGHV4-28A0A0C4DH34 117 aa11.28□□□□□ -0.6
TRPM1-203ENST00000542188 SAA4P35542 130 aa11.28□□□□□ -0.6
TRPM1-203ENST00000542188 C9JQL5 133 aa11.28□□□□□ -0.6
TRPM1-203ENST00000542188 JMJD7-PLA2G4BH0Y9G9 81 aa11.28□□□□□ -0.6
TRPM1-203ENST00000542188 IGLV3-19P01714 112 aa11.28□□□□□ -0.6
TRPM1-203ENST00000542188 GATA3P23771 443 aa11.28□□□□□ -0.6
TRPM1-203ENST00000542188 ZFP36L1Q07352 338 aaKnown RBP11.28□□□□□ -0.6
TRPM1-203ENST00000542188 FOXI2Q6ZQN5 318 aa11.28□□□□□ -0.6
TRPM1-203ENST00000542188 COX7B2Q8TF08 81 aa11.28□□□□□ -0.6
TRPM1-203ENST00000542188 ATP6V0E1O15342 81 aa11.28□□□□□ -0.6
TRPM1-203ENST00000542188 OPRPNQ99935 248 aaPredicted RBP11.28□□□□□ -0.6
TRPM1-203ENST00000542188 STRCQ7RTU9 1775 aa11.27□□□□□ -0.6
TRPM1-203ENST00000542188 IGHV2-70DA0A0C4DH43 119 aa11.27□□□□□ -0.61
TRPM1-203ENST00000542188 Q6ZRM9 215 aa11.27□□□□□ -0.61
TRPM1-203ENST00000542188 COL4A1P02462 1669 aa11.27□□□□□ -0.61
TRPM1-203ENST00000542188 EFNA2O43921 213 aa11.27□□□□□ -0.61
TRPM1-203ENST00000542188 IGKV1-39P01597 117 aa11.27□□□□□ -0.61
TRPM1-203ENST00000542188 IGKV1D-39P04432 117 aa11.27□□□□□ -0.61
TRPM1-203ENST00000542188 TEN1Q86WV5 123 aa11.27□□□□□ -0.61
TRPM1-203ENST00000542188 TRAV4A0A0B4J268 109 aa11.27□□□□□ -0.61
TRPM1-203ENST00000542188 WIPF2Q8TF74 440 aaPredicted RBP11.27□□□□□ -0.61
TRPM1-203ENST00000542188 E9PQ18 207 aa11.26□□□□□ -0.61
TRPM1-203ENST00000542188 SPTSSBQ8NFR3 76 aa11.26□□□□□ -0.61
TRPM1-203ENST00000542188 MRPL53Q96EL3 112 aaKnown RBP11.26□□□□□ -0.61
TRPM1-203ENST00000542188 IGF2BP2-AS1Q96M15 143 aa11.26□□□□□ -0.61
TRPM1-203ENST00000542188 C11orf52Q96A22 123 aa11.26□□□□□ -0.61
TRPM1-203ENST00000542188 IGHV1-69DA0A0B4J2H0 117 aa11.26□□□□□ -0.61
TRPM1-203ENST00000542188 K7EM74 188 aa11.26□□□□□ -0.61
TRPM1-203ENST00000542188 ZC2HC1AQ96GY0 325 aa11.26□□□□□ -0.61
TRPM1-203ENST00000542188 K7ERS5 55 aa11.26□□□□□ -0.61
TRPM1-203ENST00000542188 IGKV1-16P04430 117 aa11.26□□□□□ -0.61
TRPM1-203ENST00000542188 SH2D6Q7Z4S9 175 aa11.26□□□□□ -0.61
TRPM1-203ENST00000542188 ZNF747Q9BV97 191 aa11.26□□□□□ -0.61
TRPM1-203ENST00000542188 XCL1P47992 114 aa11.25□□□□□ -0.61
TRPM1-203ENST00000542188 UBE2E1P51965 193 aa11.25□□□□□ -0.61
TRPM1-203ENST00000542188 SPACA3Q8IXA5 215 aa11.25□□□□□ -0.61
TRPM1-203ENST00000542188 C3orf56Q8N813 242 aa11.25□□□□□ -0.61
TRPM1-203ENST00000542188 VOPP1Q96AW1 172 aa11.25□□□□□ -0.61
TRPM1-203ENST00000542188 IGKV2D-24A0A075B6R9 120 aa11.25□□□□□ -0.61
TRPM1-203ENST00000542188 RPL18AQ02543 176 aaKnown RBP11.25□□□□□ -0.61
TRPM1-203ENST00000542188 ZNF503Q96F45 646 aa11.25□□□□□ -0.61
TRPM1-203ENST00000542188 LINC01620Q4KN68 170 aa11.25□□□□□ -0.61
TRPM1-203ENST00000542188 BUB3O43684 328 aa11.25□□□□□ -0.61
TRPM1-203ENST00000542188 TIRAPP58753 221 aa11.24□□□□□ -0.61
TRPM1-203ENST00000542188 ZNF833PQ6ZTB9 187 aa11.24□□□□□ -0.61
TRPM1-203ENST00000542188 RNASE13Q5GAN3 156 aaKnown RBP11.24□□□□□ -0.61
TRPM1-203ENST00000542188 CLPSL2Q6UWE3 100 aa11.24□□□□□ -0.61
TRPM1-203ENST00000542188 MCM3APO60318 1980 aa11.24□□□□□ -0.61
TRPM1-203ENST00000542188 DUX4L9Q6RFH8 374 aaPredicted RBP11.24□□□□□ -0.61
TRPM1-203ENST00000542188 LTAP01374 205 aa11.24□□□□□ -0.61
TRPM1-203ENST00000542188 MRPL36Q9P0J6 103 aaKnown RBP11.24□□□□□ -0.61
TRPM1-203ENST00000542188 IGHV4-4A0A075B6R2 117 aa11.23□□□□□ -0.61
TRPM1-203ENST00000542188 IGKV1OR2-108A0A075B7D4 117 aa11.23□□□□□ -0.61
TRPM1-203ENST00000542188 MRPL23Q16540 153 aaKnown RBP11.23□□□□□ -0.61
TRPM1-203ENST00000542188 Q71RC1 249 aaPredicted RBP11.23□□□□□ -0.61
TRPM1-203ENST00000542188 KIR2DL5BA0A0G2JN68 375 aa11.23□□□□□ -0.61
TRPM1-203ENST00000542188 KIR2DL5BA0A0G2JPC4 375 aa11.23□□□□□ -0.61
TRPM1-203ENST00000542188 ZNF726P1Q15940 193 aa11.23□□□□□ -0.61
TRPM1-203ENST00000542188 LYPD2Q6UXB3 125 aa11.23□□□□□ -0.61
TRPM1-203ENST00000542188 KIR2DL5AQ8N109 375 aa11.23□□□□□ -0.61
TRPM1-203ENST00000542188 ATP6V0E2Q8NHE4 81 aa11.23□□□□□ -0.61
TRPM1-203ENST00000542188 BRWD1Q9NSI6 2320 aa11.23□□□□□ -0.61
TRPM1-203ENST00000542188 TEX36Q5VZQ5 186 aa11.23□□□□□ -0.61
TRPM1-203ENST00000542188 CRYGBP07316 175 aa11.23□□□□□ -0.61
TRPM1-203ENST00000542188 SND1-IT1Q9HBX3 110 aa11.23□□□□□ -0.61
TRPM1-203ENST00000542188 COLQQ9Y215 455 aaPredicted RBP11.23□□□□□ -0.61
TRPM1-203ENST00000542188 LINC00205P59089 165 aa11.23□□□□□ -0.61
TRPM1-203ENST00000542188 RGPD3A6NKT7 1758 aaPredicted RBP11.22□□□□□ -0.61
TRPM1-203ENST00000542188 V9GYY9 64 aa11.22□□□□□ -0.61
TRPM1-203ENST00000542188 C9orf47Q6ZRZ4 202 aa11.22□□□□□ -0.61
TRPM1-203ENST00000542188 U3KQE9 123 aa11.22□□□□□ -0.61
TRPM1-203ENST00000542188 C5orf63A6NC05 138 aa11.22□□□□□ -0.61
TRPM1-203ENST00000542188 DKK4Q9UBT3 224 aa11.22□□□□□ -0.61
TRPM1-203ENST00000542188 CKAP5Q14008 2032 aa11.22□□□□□ -0.61
TRPM1-203ENST00000542188 FAM240AA0A1B0GVK7 77 aa11.22□□□□□ -0.61
TRPM1-203ENST00000542188 FOXE3Q13461 319 aa11.22□□□□□ -0.61
TRPM1-203ENST00000542188 HIGD2BQ4VC39 106 aa11.22□□□□□ -0.61
TRPM1-203ENST00000542188 COL11A1P12107 1806 aaPredicted RBP11.21□□□□□ -0.61
TRPM1-203ENST00000542188 COL8A2P25067 703 aa11.21□□□□□ -0.61
TRPM1-203ENST00000542188 FOXI1Q12951 378 aa11.21□□□□□ -0.61
TRPM1-203ENST00000542188 PCP2Q8IVA1 136 aa11.21□□□□□ -0.61
TRPM1-203ENST00000542188 TMEM61Q8N0U2 210 aa11.21□□□□□ -0.61
TRPM1-203ENST00000542188 RBAKDNA6NC62 111 aa11.21□□□□□ -0.61
TRPM1-203ENST00000542188 C5orf24Q7Z6I8 188 aa11.21□□□□□ -0.61
TRPM1-203ENST00000542188 TRBV10-2A0A0K0K1G8 114 aa11.21□□□□□ -0.62
TRPM1-203ENST00000542188 ETV2O00321 342 aaPredicted RBP11.21□□□□□ -0.62
TRPM1-203ENST00000542188 CSRP1P21291 193 aaKnown RBP11.21□□□□□ -0.62
TRPM1-203ENST00000542188 FLVCR1-AS1Q8TAF5 88 aa11.2□□□□□ -0.62
TRPM1-203ENST00000542188 IGHV7-4-1A0A0J9YVY3 117 aa11.2□□□□□ -0.62
TRPM1-203ENST00000542188 PDE6GP18545 87 aa11.2□□□□□ -0.62
TRPM1-203ENST00000542188 FOXL2NBQ6ZUU3 175 aa11.2□□□□□ -0.62
TRPM1-203ENST00000542188 FXYD5Q96DB9 178 aa11.2□□□□□ -0.62
TRPM1-203ENST00000542188 COL24A1Q17RW2 1714 aa11.2□□□□□ -0.62
TRPM1-203ENST00000542188 A0A096LPF7 62 aa11.2□□□□□ -0.62
TRPM1-203ENST00000542188 CAMK2N2Q96S95 79 aa11.2□□□□□ -0.62
TRPM1-203ENST00000542188 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.2□□□□□ -0.62
TRPM1-203ENST00000542188 IGKV2-29A2NJV5 120 aaPredicted RBP11.2□□□□□ -0.62
TRPM1-203ENST00000542188 F5P12259 2224 aa11.2□□□□□ -0.62
TRPM1-203ENST00000542188 H3BT86 120 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms