RNA–Protein interactions for RNA: ENST00000540083.1

NECAP1-204, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 863 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-204ENST00000540083 PPDPFLQ8WWR9 84 aa5.96□□□□□ -1.46
NECAP1-204ENST00000540083 URB1-AS1Q96HZ7 61 aa5.96□□□□□ -1.46
NECAP1-204ENST00000540083 ZNF714Q96N38 554 aa5.96□□□□□ -1.46
NECAP1-204ENST00000540083 CITED1Q99966 193 aa5.96□□□□□ -1.46
NECAP1-204ENST00000540083 MAP1LC3AQ9H492 121 aa5.96□□□□□ -1.46
NECAP1-204ENST00000540083 CCL28Q9NRJ3 127 aa5.96□□□□□ -1.46
NECAP1-204ENST00000540083 ONECUT1Q9UBC0 465 aa5.96□□□□□ -1.46
NECAP1-204ENST00000540083 MAST4O15021 2626 aa5.96□□□□□ -1.46
NECAP1-204ENST00000540083 TRAV24A0A0B4J272 114 aa5.95□□□□□ -1.46
NECAP1-204ENST00000540083 A0A1B0GWB2 263 aa5.95□□□□□ -1.46
NECAP1-204ENST00000540083 SPINT2O43291 252 aa5.95□□□□□ -1.46
NECAP1-204ENST00000540083 IGKV1-39P01597 117 aa5.95□□□□□ -1.46
NECAP1-204ENST00000540083 IGKV1D-39P04432 117 aa5.95□□□□□ -1.46
NECAP1-204ENST00000540083 GCSHP23434 173 aa5.95□□□□□ -1.46
NECAP1-204ENST00000540083 PRTN3P24158 256 aa5.95□□□□□ -1.46
NECAP1-204ENST00000540083 FCGR2BP31994 310 aaPredicted RBP5.95□□□□□ -1.46
NECAP1-204ENST00000540083 RPL30P62888 115 aaKnown RBP5.95□□□□□ -1.46
NECAP1-204ENST00000540083 CATR1Q13166 79 aa5.95□□□□□ -1.46
NECAP1-204ENST00000540083 TMEM78Q5T7P6 136 aa5.95□□□□□ -1.46
NECAP1-204ENST00000540083 MALRD1Q5VYJ5 2156 aa5.95□□□□□ -1.46
NECAP1-204ENST00000540083 SPATA31B1PQ5VZV4 182 aa5.95□□□□□ -1.46
NECAP1-204ENST00000540083 TMEM200BQ69YZ2 307 aa5.95□□□□□ -1.46
NECAP1-204ENST00000540083 Q6ZRM9 215 aa5.95□□□□□ -1.46
NECAP1-204ENST00000540083 SMIM20Q8N5G0 67 aa5.95□□□□□ -1.46
NECAP1-204ENST00000540083 COQ2Q96H96 371 aa5.95□□□□□ -1.46
NECAP1-204ENST00000540083 ZNF747Q9BV97 191 aa5.95□□□□□ -1.46
NECAP1-204ENST00000540083 TPPP3Q9BW30 176 aa5.95□□□□□ -1.46
NECAP1-204ENST00000540083 TEX15Q9BXT5 2789 aa5.95□□□□□ -1.46
NECAP1-204ENST00000540083 IDI2-AS1Q9NZ38 188 aa5.95□□□□□ -1.46
NECAP1-204ENST00000540083 ZNF492Q9P255 531 aa5.95□□□□□ -1.46
NECAP1-204ENST00000540083 VPREB3Q9UKI3 123 aa5.95□□□□□ -1.46
NECAP1-204ENST00000540083 AKAP9Q99996 3911 aa5.95□□□□□ -1.46
NECAP1-204ENST00000540083 CR1P17927 2039 aa5.94□□□□□ -1.46
NECAP1-204ENST00000540083 ABCA1O95477 2261 aa5.94□□□□□ -1.46
NECAP1-204ENST00000540083 C17orf98A8MV24 154 aa5.94□□□□□ -1.46
NECAP1-204ENST00000540083 HSPB6O14558 160 aa5.94□□□□□ -1.46
NECAP1-204ENST00000540083 CNIH1O95406 144 aa5.94□□□□□ -1.46
NECAP1-204ENST00000540083 IGLV2-8P01709 118 aa5.94□□□□□ -1.46
NECAP1-204ENST00000540083 PF4V1P10720 104 aa5.94□□□□□ -1.46
NECAP1-204ENST00000540083 MFAP2P55001 183 aa5.94□□□□□ -1.46
NECAP1-204ENST00000540083 ZNF497Q6ZNH5 498 aa5.94□□□□□ -1.46
NECAP1-204ENST00000540083 Q6ZPA2 131 aa5.94□□□□□ -1.46
NECAP1-204ENST00000540083 DNAJC30Q96LL9 226 aa5.94□□□□□ -1.46
NECAP1-204ENST00000540083 SLC25A2Q9BXI2 301 aa5.94□□□□□ -1.46
NECAP1-204ENST00000540083 IL36RNQ9UBH0 155 aa5.94□□□□□ -1.46
NECAP1-204ENST00000540083 LSM4Q9Y4Z0 139 aaKnown RBP5.94□□□□□ -1.46
NECAP1-204ENST00000540083 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.94□□□□□ -1.469e-7■■■■■ 30.3
NECAP1-204ENST00000540083 OTOGQ6ZRI0 2925 aa5.94□□□□□ -1.46
NECAP1-204ENST00000540083 MED13LQ71F56 2210 aa5.94□□□□□ -1.46
NECAP1-204ENST00000540083 VPS13CQ709C8 3753 aa5.93□□□□□ -1.46
NECAP1-204ENST00000540083 HIVEP2P31629 2446 aa5.93□□□□□ -1.46
NECAP1-204ENST00000540083 A0A1B0GX51 115 aa5.93□□□□□ -1.46
NECAP1-204ENST00000540083 FBLL1A6NHQ2 334 aaKnown RBP5.93□□□□□ -1.46
NECAP1-204ENST00000540083 B5MCH6 92 aa5.93□□□□□ -1.46
NECAP1-204ENST00000540083 C15orf65H3BRN8 121 aa5.93□□□□□ -1.46
NECAP1-204ENST00000540083 CRLF1O75462 422 aa5.93□□□□□ -1.46
NECAP1-204ENST00000540083 IGHV1-8P0DP01 117 aa5.93□□□□□ -1.46
NECAP1-204ENST00000540083 VDAC2P45880 294 aaPredicted RBP5.93□□□□□ -1.46
NECAP1-204ENST00000540083 UBE2E1P51965 193 aa5.93□□□□□ -1.46
NECAP1-204ENST00000540083 RPL8P62917 257 aaKnown RBP5.93□□□□□ -1.46
NECAP1-204ENST00000540083 VMO1Q7Z5L0 202 aa5.93□□□□□ -1.46
NECAP1-204ENST00000540083 PPP1R27Q86WC6 154 aa5.93□□□□□ -1.46
NECAP1-204ENST00000540083 NUP35Q8NFH5 326 aa5.93□□□□□ -1.46
NECAP1-204ENST00000540083 RPEQ96AT9 228 aa5.93□□□□□ -1.46
NECAP1-204ENST00000540083 SIRPDQ9H106 197 aa5.93□□□□□ -1.46
NECAP1-204ENST00000540083 LINC00574Q9H8X3 128 aa5.93□□□□□ -1.46
NECAP1-204ENST00000540083 AMMECR1Q9Y4X0 333 aaPredicted RBP5.93□□□□□ -1.46
NECAP1-204ENST00000540083 TCRBV4S1A1TA0A5B7 111 aa5.92□□□□□ -1.46
NECAP1-204ENST00000540083 A8MWL6 223 aa5.92□□□□□ -1.46
NECAP1-204ENST00000540083 IGLL5B9A064 214 aa5.92□□□□□ -1.46
NECAP1-204ENST00000540083 XGP55808 180 aa5.92□□□□□ -1.46
NECAP1-204ENST00000540083 NDUFV3P56181 108 aaKnown RBP5.92□□□□□ -1.46
NECAP1-204ENST00000540083 HOXA4Q00056 320 aaPredicted RBP5.92□□□□□ -1.46
NECAP1-204ENST00000540083 KRTAP1-1Q07627 177 aa5.92□□□□□ -1.46
NECAP1-204ENST00000540083 WFDC2Q14508 124 aa5.92□□□□□ -1.46
NECAP1-204ENST00000540083 RRN3P1Q2M238 152 aa5.92□□□□□ -1.46
NECAP1-204ENST00000540083 ETDBQ3ZM63 59 aa5.92□□□□□ -1.46
NECAP1-204ENST00000540083 MINOS1Q5TGZ0 78 aa5.92□□□□□ -1.46
NECAP1-204ENST00000540083 CFAP126Q5VTH2 177 aa5.92□□□□□ -1.46
NECAP1-204ENST00000540083 DUX4L9Q6RFH8 374 aaPredicted RBP5.92□□□□□ -1.46
NECAP1-204ENST00000540083 C9orf139Q6ZV77 190 aa5.92□□□□□ -1.46
NECAP1-204ENST00000540083 TEN1Q86WV5 123 aa5.92□□□□□ -1.46
NECAP1-204ENST00000540083 SBSPONQ8IVN8 264 aa5.92□□□□□ -1.46
NECAP1-204ENST00000540083 OSR1Q8TAX0 266 aaPredicted RBP5.92□□□□□ -1.46
NECAP1-204ENST00000540083 CYYR1Q96J86 154 aa5.92□□□□□ -1.46
NECAP1-204ENST00000540083 LINC01600Q96MT4 127 aa5.92□□□□□ -1.46
NECAP1-204ENST00000540083 SMR3AQ99954 134 aa5.92□□□□□ -1.46
NECAP1-204ENST00000540083 CALYQ9NYX4 217 aa5.92□□□□□ -1.46
NECAP1-204ENST00000540083 MDFICQ9P1T7 246 aa5.92□□□□□ -1.46
NECAP1-204ENST00000540083 SIGLEC9Q9Y336 463 aa5.92□□□□□ -1.46
NECAP1-204ENST00000540083 MINOS1-NBL1R4GNA1 71 aa5.92□□□□□ -1.46
NECAP1-204ENST00000540083 FLNAP21333 2647 aaKnown RBP5.92□□□□□ -1.46
NECAP1-204ENST00000540083 MAP1AP78559 2803 aaPredicted RBP5.91□□□□□ -1.46
NECAP1-204ENST00000540083 TRAV40A0A0B4J280 105 aa5.91□□□□□ -1.46
NECAP1-204ENST00000540083 IGHV1-69DA0A0B4J2H0 117 aa5.91□□□□□ -1.46
NECAP1-204ENST00000540083 IGKV1-6A0A0C4DH72 117 aa5.91□□□□□ -1.46
NECAP1-204ENST00000540083 C15orf62A8K5M9 175 aa5.91□□□□□ -1.46
NECAP1-204ENST00000540083 OOSP1A8MZH6 123 aa5.91□□□□□ -1.46
NECAP1-204ENST00000540083 INAFM1C9JVW0 142 aa5.91□□□□□ -1.46
NECAP1-204ENST00000540083 PRSS46E5RG02 174 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms