RNA–Protein interactions for RNA: ENST00000539303.5

SNHG1-210, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 240 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-210ENST00000539303 Q8TAT8 98 aa1.37□□□□□ -2.19
SNHG1-210ENST00000539303 REG4Q9BYZ8 158 aa1.37□□□□□ -2.19
SNHG1-210ENST00000539303 TMEM106BQ9NUM4 274 aa1.37□□□□□ -2.19
SNHG1-210ENST00000539303 COMMD3Q9UBI1 195 aa1.37□□□□□ -2.19
SNHG1-210ENST00000539303 ERG28Q9UKR5 140 aa1.37□□□□□ -2.19
SNHG1-210ENST00000539303 CHCHD2Q9Y6H1 151 aaPredicted RBP1.37□□□□□ -2.19
SNHG1-210ENST00000539303 RTTNQ86VV8 2226 aa1.37□□□□□ -2.19
SNHG1-210ENST00000539303 SYNJ1O43426 1573 aa1.37□□□□□ -2.19
SNHG1-210ENST00000539303 PEG3Q9GZU2 1588 aa1.37□□□□□ -2.19
SNHG1-210ENST00000539303 HEATR1Q9H583 2144 aaKnown RBP1.36□□□□□ -2.19
SNHG1-210ENST00000539303 TRGV2A0A075B6R0 118 aa1.36□□□□□ -2.19
SNHG1-210ENST00000539303 TPST1O60507 370 aa1.36□□□□□ -2.19
SNHG1-210ENST00000539303 HYPMO75409 117 aa1.36□□□□□ -2.19
SNHG1-210ENST00000539303 TSPAN19P0C672 248 aa1.36□□□□□ -2.19
SNHG1-210ENST00000539303 CKS2P33552 79 aa1.36□□□□□ -2.19
SNHG1-210ENST00000539303 ETV6P41212 452 aa1.36□□□□□ -2.19
SNHG1-210ENST00000539303 TEN1Q86WV5 123 aa1.36□□□□□ -2.19
SNHG1-210ENST00000539303 C10orf111Q8N326 155 aa1.36□□□□□ -2.19
SNHG1-210ENST00000539303 OR4C6Q8NH72 309 aa1.36□□□□□ -2.19
SNHG1-210ENST00000539303 ZNF431Q8TF32 576 aaPredicted RBP1.36□□□□□ -2.19
SNHG1-210ENST00000539303 PLXNA4Q9HCM2 1894 aa1.36□□□□□ -2.19
SNHG1-210ENST00000539303 BRWD1Q9NSI6 2320 aa1.36□□□□□ -2.19
SNHG1-210ENST00000539303 MYOFQ9NZM1 2061 aa1.36□□□□□ -2.19
SNHG1-210ENST00000539303 ERCC6Q03468 1493 aa1.36□□□□□ -2.19
SNHG1-210ENST00000539303 COL4A5P29400 1685 aa1.35□□□□□ -2.19
SNHG1-210ENST00000539303 RFX7Q2KHR2 1363 aa1.35□□□□□ -2.19
SNHG1-210ENST00000539303 KDM5CP41229 1560 aa1.35□□□□□ -2.19
SNHG1-210ENST00000539303 MYH6P13533 1939 aa1.35□□□□□ -2.19
SNHG1-210ENST00000539303 MYH13Q9UKX3 1938 aa1.35□□□□□ -2.19
SNHG1-210ENST00000539303 RGS12O14924 1447 aa1.35□□□□□ -2.19
SNHG1-210ENST00000539303 KDM6AO15550 1401 aaPredicted RBP1.35□□□□□ -2.19
SNHG1-210ENST00000539303 TNS3Q68CZ2 1445 aa1.35□□□□□ -2.19
SNHG1-210ENST00000539303 FAM236AA0A1B0GUQ0 79 aa1.35□□□□□ -2.19
SNHG1-210ENST00000539303 FAM236BA0A1B0GV22 79 aa1.35□□□□□ -2.19
SNHG1-210ENST00000539303 A0A1B0GV90 55 aa1.35□□□□□ -2.19
SNHG1-210ENST00000539303 FAM25AB3EWG3 89 aa1.35□□□□□ -2.19
SNHG1-210ENST00000539303 FAM25CB3EWG5 89 aa1.35□□□□□ -2.19
SNHG1-210ENST00000539303 FAM25GB3EWG6 89 aa1.35□□□□□ -2.19
SNHG1-210ENST00000539303 ZNF736B4DX44 427 aaPredicted RBP1.35□□□□□ -2.19
SNHG1-210ENST00000539303 NPFFO15130 113 aa1.35□□□□□ -2.19
SNHG1-210ENST00000539303 GNG7O60262 68 aa1.35□□□□□ -2.19
SNHG1-210ENST00000539303 CD14P08571 375 aa1.35□□□□□ -2.19
SNHG1-210ENST00000539303 CCL4P13236 92 aa1.35□□□□□ -2.19
SNHG1-210ENST00000539303 CNBPP62633 177 aaKnown RBP1.35□□□□□ -2.19
SNHG1-210ENST00000539303 NEDD8Q15843 81 aa1.35□□□□□ -2.19
SNHG1-210ENST00000539303 CLLU1Q5K131 121 aa1.35□□□□□ -2.19
SNHG1-210ENST00000539303 C10orf55Q5SWW7 151 aa1.35□□□□□ -2.19
SNHG1-210ENST00000539303 ZNF833PQ6ZTB9 187 aa1.35□□□□□ -2.19
SNHG1-210ENST00000539303 OR5AS1Q8N127 324 aa1.35□□□□□ -2.19
SNHG1-210ENST00000539303 LINC00269Q8N2A0 174 aa1.35□□□□□ -2.19
SNHG1-210ENST00000539303 OTOSQ8NHW6 89 aa1.35□□□□□ -2.19
SNHG1-210ENST00000539303 PSMF1Q92530 271 aa1.35□□□□□ -2.19
SNHG1-210ENST00000539303 KLK9Q9UKQ9 250 aa1.35□□□□□ -2.19
SNHG1-210ENST00000539303 DNAJC15Q9Y5T4 150 aa1.35□□□□□ -2.19
SNHG1-210ENST00000539303 COL1A1P02452 1464 aaPredicted RBP1.35□□□□□ -2.19
SNHG1-210ENST00000539303 COL24A1Q17RW2 1714 aa1.35□□□□□ -2.19
SNHG1-210ENST00000539303 IBTKQ9P2D0 1353 aaPredicted RBP1.34□□□□□ -2.19
SNHG1-210ENST00000539303 LAMB4A4D0S4 1761 aa1.34□□□□□ -2.19
SNHG1-210ENST00000539303 IGHV1-24A0A0C4DH33 117 aa1.34□□□□□ -2.19
SNHG1-210ENST00000539303 PNMA8CA0A1B0GUJ8 204 aa1.34□□□□□ -2.19
SNHG1-210ENST00000539303 F8W1H4 67 aa1.34□□□□□ -2.19
SNHG1-210ENST00000539303 EDF1O60869 148 aaKnown RBP1.34□□□□□ -2.19
SNHG1-210ENST00000539303 CD3DP04234 171 aa1.34□□□□□ -2.19
SNHG1-210ENST00000539303 RRAS2P62070 204 aaPredicted RBP1.34□□□□□ -2.19
SNHG1-210ENST00000539303 SELENOWP63302 87 aa1.34□□□□□ -2.19
SNHG1-210ENST00000539303 DEFB103AP81534 67 aa1.34□□□□□ -2.19
SNHG1-210ENST00000539303 MIR22HGQ0VDD5 57 aa1.34□□□□□ -2.19
SNHG1-210ENST00000539303 FAM74A1Q5RGS3 127 aa1.34□□□□□ -2.19
SNHG1-210ENST00000539303 CASC2Q6XLA1 102 aa1.34□□□□□ -2.19
SNHG1-210ENST00000539303 KRTAP5-2Q701N4 177 aa1.34□□□□□ -2.19
SNHG1-210ENST00000539303 FAM19A2Q8N3H0 131 aa1.34□□□□□ -2.19
SNHG1-210ENST00000539303 C15orf53Q8NAA6 179 aa1.34□□□□□ -2.19
SNHG1-210ENST00000539303 OR10AC1Q8NH08 325 aa1.34□□□□□ -2.19
SNHG1-210ENST00000539303 C1orf54Q8WWF1 131 aa1.34□□□□□ -2.19
SNHG1-210ENST00000539303 ARL11Q969Q4 196 aa1.34□□□□□ -2.19
SNHG1-210ENST00000539303 ZNF625Q96I27 306 aaPredicted RBP1.34□□□□□ -2.19
SNHG1-210ENST00000539303 CIB3Q96Q77 187 aaPredicted RBP1.34□□□□□ -2.19
SNHG1-210ENST00000539303 LINC00470Q9BZP3 86 aa1.34□□□□□ -2.19
SNHG1-210ENST00000539303 ORMDL1Q9P0S3 153 aa1.34□□□□□ -2.19
SNHG1-210ENST00000539303 METTL1Q9UBP6 276 aaKnown RBP1.34□□□□□ -2.19
SNHG1-210ENST00000539303 SOX21Q9Y651 276 aaPredicted RBP1.34□□□□□ -2.19
SNHG1-210ENST00000539303 PTPRFP10586 1907 aa1.34□□□□□ -2.2
SNHG1-210ENST00000539303 ALPK2Q86TB3 2170 aa1.34□□□□□ -2.2
SNHG1-210ENST00000539303 DOCK10Q96BY6 2186 aa1.34□□□□□ -2.2
SNHG1-210ENST00000539303 NCOA3Q9Y6Q9 1424 aa1.33□□□□□ -2.2
SNHG1-210ENST00000539303 MYH7P12883 1935 aa1.33□□□□□ -2.2
SNHG1-210ENST00000539303 HELZP42694 1942 aaKnown RBP1.33□□□□□ -2.2
SNHG1-210ENST00000539303 COL5A3P25940 1745 aaPredicted RBP1.33□□□□□ -2.2
SNHG1-210ENST00000539303 H3BRM9 83 aa1.33□□□□□ -2.2
SNHG1-210ENST00000539303 M0R129 80 aa1.33□□□□□ -2.2
SNHG1-210ENST00000539303 CCL16O15467 120 aa1.33□□□□□ -2.2
SNHG1-210ENST00000539303 NCR2O95944 276 aa1.33□□□□□ -2.2
SNHG1-210ENST00000539303 RBP4P02753 201 aa1.33□□□□□ -2.2
SNHG1-210ENST00000539303 RNASE3P12724 160 aaKnown RBP1.33□□□□□ -2.2
SNHG1-210ENST00000539303 KRTAP13-4Q3LI77 160 aa1.33□□□□□ -2.2
SNHG1-210ENST00000539303 FOXI2Q6ZQN5 318 aa1.33□□□□□ -2.2
SNHG1-210ENST00000539303 Q8N2B8 174 aa1.33□□□□□ -2.2
SNHG1-210ENST00000539303 LINC00052Q96N35 136 aa1.33□□□□□ -2.2
SNHG1-210ENST00000539303 SMIM7Q9BQ49 75 aa1.33□□□□□ -2.2
SNHG1-210ENST00000539303 NAA38Q9BRA0 125 aaKnown RBP1.33□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms