RNA–Protein interactions for RNA: ENST00000534262.1

HIPK3-206, Transcript of homeodomain interacting protein kinase 3, humanhuman

TSL 1 (best)

Gene HIPK3, Length 349 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3-206ENST00000534262 TIMM17BO60830 172 aa1.87□□□□□ -2.11
HIPK3-206ENST00000534262 TMEM258P61165 79 aa1.87□□□□□ -2.11
HIPK3-206ENST00000534262 ERHP84090 104 aaKnown RBP1.87□□□□□ -2.11
HIPK3-206ENST00000534262 MYL5Q02045 173 aa1.87□□□□□ -2.11
HIPK3-206ENST00000534262 ZNF846Q147U1 533 aa1.87□□□□□ -2.11
HIPK3-206ENST00000534262 ITSN1Q15811 1721 aa1.87□□□□□ -2.11
HIPK3-206ENST00000534262 EDC4Q6P2E9 1401 aaKnown RBP1.87□□□□□ -2.11
HIPK3-206ENST00000534262 C7orf65Q6ZTY9 151 aa1.87□□□□□ -2.11
HIPK3-206ENST00000534262 LINC00305Q7Z4B0 112 aa1.87□□□□□ -2.11
HIPK3-206ENST00000534262 LRRC28Q86X40 367 aaPredicted RBP1.87□□□□□ -2.11
HIPK3-206ENST00000534262 TCTE3Q8IZS6 198 aa1.87□□□□□ -2.11
HIPK3-206ENST00000534262 OR4X2Q8NGF9 303 aa1.87□□□□□ -2.11
HIPK3-206ENST00000534262 LXNQ9BS40 222 aa1.87□□□□□ -2.11
HIPK3-206ENST00000534262 PEAK1Q9H792 1746 aa1.87□□□□□ -2.11
HIPK3-206ENST00000534262 MYH7BA7E2Y1 1941 aa1.87□□□□□ -2.11
HIPK3-206ENST00000534262 AKAP12Q02952 1782 aa1.87□□□□□ -2.11
HIPK3-206ENST00000534262 PAPPAQ13219 1627 aa1.87□□□□□ -2.11
HIPK3-206ENST00000534262 LTBP2Q14767 1821 aa1.87□□□□□ -2.11
HIPK3-206ENST00000534262 SDK2Q58EX2 2172 aa1.86□□□□□ -2.11
HIPK3-206ENST00000534262 TRAV13-1A0A0B4J241 112 aa1.86□□□□□ -2.11
HIPK3-206ENST00000534262 FNDC10F2Z333 226 aa1.86□□□□□ -2.11
HIPK3-206ENST00000534262 RER1O15258 196 aa1.86□□□□□ -2.11
HIPK3-206ENST00000534262 DPM2O94777 84 aa1.86□□□□□ -2.11
HIPK3-206ENST00000534262 OR2H2O95918 312 aa1.86□□□□□ -2.11
HIPK3-206ENST00000534262 TSPAN19P0C672 248 aa1.86□□□□□ -2.11
HIPK3-206ENST00000534262 BAALC-AS2P0C853 105 aa1.86□□□□□ -2.11
HIPK3-206ENST00000534262 UBBP0CG47 229 aa1.86□□□□□ -2.11
HIPK3-206ENST00000534262 HINT1P49773 126 aaPredicted RBP1.86□□□□□ -2.11
HIPK3-206ENST00000534262 FOXA3P55318 350 aaPredicted RBP1.86□□□□□ -2.11
HIPK3-206ENST00000534262 HIST1H1AQ02539 215 aaPredicted RBP1.86□□□□□ -2.11
HIPK3-206ENST00000534262 SPCS2Q15005 226 aa1.86□□□□□ -2.11
HIPK3-206ENST00000534262 Q8N814 137 aa1.86□□□□□ -2.11
HIPK3-206ENST00000534262 MORN4Q8NDC4 146 aa1.86□□□□□ -2.11
HIPK3-206ENST00000534262 WFDC11Q8NEX6 87 aa1.86□□□□□ -2.11
HIPK3-206ENST00000534262 LZICQ8WZA0 190 aa1.86□□□□□ -2.11
HIPK3-206ENST00000534262 PAIP2BQ9ULR5 123 aaKnown RBP1.86□□□□□ -2.11
HIPK3-206ENST00000534262 LRRC37A3O60309 1634 aa1.86□□□□□ -2.11
HIPK3-206ENST00000534262 EML6Q6ZMW3 1958 aa1.86□□□□□ -2.11
HIPK3-206ENST00000534262 SBF2Q86WG5 1849 aa1.86□□□□□ -2.11
HIPK3-206ENST00000534262 CACNA1GO43497 2377 aa1.86□□□□□ -2.11
HIPK3-206ENST00000534262 PIK3C2AO00443 1686 aa1.86□□□□□ -2.11
HIPK3-206ENST00000534262 ZFHX2Q9C0A1 2572 aaPredicted RBP1.86□□□□□ -2.11
HIPK3-206ENST00000534262 RFX7Q2KHR2 1363 aa1.85□□□□□ -2.11
HIPK3-206ENST00000534262 PHRF1Q9P1Y6 1649 aaKnown RBP1.85□□□□□ -2.11
HIPK3-206ENST00000534262 ARFGEF1Q9Y6D6 1849 aa1.85□□□□□ -2.11
HIPK3-206ENST00000534262 A0A087WSZ3 146 aa1.85□□□□□ -2.11
HIPK3-206ENST00000534262 ZNF727A8MUV8 499 aa1.85□□□□□ -2.11
HIPK3-206ENST00000534262 H3BMG7 143 aa1.85□□□□□ -2.11
HIPK3-206ENST00000534262 ZNF737O75373 536 aa1.85□□□□□ -2.11
HIPK3-206ENST00000534262 FABP2P12104 132 aa1.85□□□□□ -2.11
HIPK3-206ENST00000534262 EVI2AP22794 236 aa1.85□□□□□ -2.11
HIPK3-206ENST00000534262 QRFPP83859 136 aa1.85□□□□□ -2.11
HIPK3-206ENST00000534262 Q1T7F1 81 aa1.85□□□□□ -2.11
HIPK3-206ENST00000534262 CCDC58Q4VC31 144 aa1.85□□□□□ -2.11
HIPK3-206ENST00000534262 TMEM155Q4W5P6 130 aa1.85□□□□□ -2.11
HIPK3-206ENST00000534262 SPANXN5Q5MJ07 72 aa1.85□□□□□ -2.11
HIPK3-206ENST00000534262 GLYATL3Q5SZD4 288 aa1.85□□□□□ -2.11
HIPK3-206ENST00000534262 KRTAP26-1Q6PEX3 210 aa1.85□□□□□ -2.11
HIPK3-206ENST00000534262 OR5A2Q8NGI9 324 aa1.85□□□□□ -2.11
HIPK3-206ENST00000534262 OR5D16Q8NGK9 328 aa1.85□□□□□ -2.11
HIPK3-206ENST00000534262 OR4C6Q8NH72 309 aa1.85□□□□□ -2.11
HIPK3-206ENST00000534262 RETNLBQ9BQ08 111 aa1.85□□□□□ -2.11
HIPK3-206ENST00000534262 NIT2Q9NQR4 276 aa1.85□□□□□ -2.11
HIPK3-206ENST00000534262 ZNF609O15014 1411 aa1.84□□□□□ -2.11
HIPK3-206ENST00000534262 IGKV2D-26A0A0A0MRZ7 120 aa1.84□□□□□ -2.11
HIPK3-206ENST00000534262 IGKV3D-11A0A0A0MRZ8 115 aa1.84□□□□□ -2.11
HIPK3-206ENST00000534262 TRAV1-1A0A0B4J248 108 aa1.84□□□□□ -2.11
HIPK3-206ENST00000534262 IGKV1-17P01599 117 aa1.84□□□□□ -2.11
HIPK3-206ENST00000534262 MT-ND4LP03901 98 aa1.84□□□□□ -2.11
HIPK3-206ENST00000534262 IFNA4P05014 189 aa1.84□□□□□ -2.11
HIPK3-206ENST00000534262 ASAH2BP0C7U1 165 aa1.84□□□□□ -2.11
HIPK3-206ENST00000534262 KDELR1P24390 212 aa1.84□□□□□ -2.11
HIPK3-206ENST00000534262 CMPK1P30085 196 aa1.84□□□□□ -2.11
HIPK3-206ENST00000534262 KLRD1Q13241 179 aa1.84□□□□□ -2.11
HIPK3-206ENST00000534262 PDE6HQ13956 83 aa1.84□□□□□ -2.11
HIPK3-206ENST00000534262 TMEM244Q5VVB8 128 aa1.84□□□□□ -2.11
HIPK3-206ENST00000534262 CROCCP2Q86T23 111 aa1.84□□□□□ -2.11
HIPK3-206ENST00000534262 PSMF1Q92530 271 aa1.84□□□□□ -2.11
HIPK3-206ENST00000534262 MCEEQ96PE7 176 aa1.84□□□□□ -2.11
HIPK3-206ENST00000534262 PRO3102Q9H379 93 aa1.84□□□□□ -2.11
HIPK3-206ENST00000534262 C14orf132Q9NPU4 83 aa1.84□□□□□ -2.11
HIPK3-206ENST00000534262 COPZ2Q9P299 210 aa1.84□□□□□ -2.11
HIPK3-206ENST00000534262 SOX21Q9Y651 276 aaPredicted RBP1.84□□□□□ -2.11
HIPK3-206ENST00000534262 U3KQ87 197 aa1.84□□□□□ -2.11
HIPK3-206ENST00000534262 EP400Q96L91 3159 aa1.84□□□□□ -2.12
HIPK3-206ENST00000534262 BTAF1O14981 1849 aa1.84□□□□□ -2.12
HIPK3-206ENST00000534262 NUP98P52948 1817 aa1.84□□□□□ -2.12
HIPK3-206ENST00000534262 NUMA1Q14980 2115 aa1.84□□□□□ -2.12
HIPK3-206ENST00000534262 IBTKQ9P2D0 1353 aaPredicted RBP1.84□□□□□ -2.12
HIPK3-206ENST00000534262 COL4A5P29400 1685 aa1.83□□□□□ -2.12
HIPK3-206ENST00000534262 FAM208AQ9UK61 1670 aaKnown RBP1.83□□□□□ -2.12
HIPK3-206ENST00000534262 C4AP0C0L4 1744 aa1.83□□□□□ -2.12
HIPK3-206ENST00000534262 C4BP0C0L5 1744 aa1.83□□□□□ -2.12
HIPK3-206ENST00000534262 IFT172Q9UG01 1749 aa1.83□□□□□ -2.12
HIPK3-206ENST00000534262 COL1A1P02452 1464 aaPredicted RBP1.83□□□□□ -2.12
HIPK3-206ENST00000534262 PPLO60437 1756 aa1.83□□□□□ -2.12
HIPK3-206ENST00000534262 VIRMAQ69YN4 1812 aaKnown RBP1.83□□□□□ -2.12
HIPK3-206ENST00000534262 TRAV3A0A0B4J244 114 aa1.83□□□□□ -2.12
HIPK3-206ENST00000534262 TRAV12-1A0A0B4J245 112 aa1.83□□□□□ -2.12
HIPK3-206ENST00000534262 SSR2P43308 183 aa1.83□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms