RNA–Protein interactions for RNA: ENST00000533820.5

CAPN1-226, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-226ENST00000533820 TMEM14CQ9P0S9 112 aa15.19■□□□□ 0.02
CAPN1-226ENST00000533820 HSPB8Q9UJY1 196 aa15.19■□□□□ 0.02
CAPN1-226ENST00000533820 D6R8Y8 96 aa15.18■□□□□ 0.02
CAPN1-226ENST00000533820 CT45A10P0DMU9 189 aa15.18■□□□□ 0.02
CAPN1-226ENST00000533820 IGF2-ASQ6U949 168 aa15.18■□□□□ 0.02
CAPN1-226ENST00000533820 LYZL1Q6UWQ5 148 aa15.18■□□□□ 0.02
CAPN1-226ENST00000533820 MTURNQ8N3F0 131 aa15.18■□□□□ 0.02
CAPN1-226ENST00000533820 SH2D6Q7Z4S9 175 aa15.18■□□□□ 0.02
CAPN1-226ENST00000533820 MAP1AP78559 2803 aaPredicted RBP15.18■□□□□ 0.02
CAPN1-226ENST00000533820 A6NDN8 102 aa15.18■□□□□ 0.02
CAPN1-226ENST00000533820 NCBP2LA6PVI3 153 aaKnown RBP15.18■□□□□ 0.02
CAPN1-226ENST00000533820 OR5A1Q8NGJ0 315 aa15.18■□□□□ 0.02
CAPN1-226ENST00000533820 ZNF414Q96IQ9 312 aa15.18■□□□□ 0.02
CAPN1-226ENST00000533820 H3BRN7 92 aa15.17■□□□□ 0.02
CAPN1-226ENST00000533820 ODF1Q14990 250 aa15.17■□□□□ 0.02
CAPN1-226ENST00000533820 HRNRQ86YZ3 2850 aaPredicted RBP15.17■□□□□ 0.02
CAPN1-226ENST00000533820 WFDC2Q14508 124 aa15.17■□□□□ 0.02
CAPN1-226ENST00000533820 FABP2P12104 132 aa15.16■□□□□ 0.02
CAPN1-226ENST00000533820 B9A039 149 aa15.16■□□□□ 0.02
CAPN1-226ENST00000533820 CLEC3BP05452 202 aa15.16■□□□□ 0.02
CAPN1-226ENST00000533820 HLA-DMBP28068 263 aa15.16■□□□□ 0.02
CAPN1-226ENST00000533820 ZNF747Q9BV97 191 aa15.16■□□□□ 0.02
CAPN1-226ENST00000533820 A0A1B0GW15 77 aa15.15■□□□□ 0.02
CAPN1-226ENST00000533820 BRI3O95415 125 aa15.15■□□□□ 0.02
CAPN1-226ENST00000533820 ZNF672Q499Z4 452 aaPredicted RBP15.15■□□□□ 0.02
CAPN1-226ENST00000533820 AAMDCQ9H7C9 122 aa15.15■□□□□ 0.02
CAPN1-226ENST00000533820 NBR2O15453 112 aa15.15■□□□□ 0.02
CAPN1-226ENST00000533820 TSPAN13O95857 204 aa15.15■□□□□ 0.02
CAPN1-226ENST00000533820 TMEM75Q8N9X5 138 aa15.15■□□□□ 0.02
CAPN1-226ENST00000533820 RABAC1Q9UI14 185 aa15.15■□□□□ 0.02
CAPN1-226ENST00000533820 TMEM189A5PLL7 270 aa15.14■□□□□ 0.01
CAPN1-226ENST00000533820 INSL3P51460 131 aa15.14■□□□□ 0.01
CAPN1-226ENST00000533820 SPAG8Q99932 426 aaPredicted RBP15.14■□□□□ 0.01
CAPN1-226ENST00000533820 HIF1ANQ9NWT6 349 aa15.14■□□□□ 0.01
CAPN1-226ENST00000533820 TRBV7-9A0A0J9YWB2 115 aa15.14■□□□□ 0.01
CAPN1-226ENST00000533820 NPIPB5A8MRT5 1133 aa15.14■□□□□ 0.01
CAPN1-226ENST00000533820 HOXB4P17483 251 aaPredicted RBP15.14■□□□□ 0.01
CAPN1-226ENST00000533820 CSN1S1P47710 185 aa15.14■□□□□ 0.01
CAPN1-226ENST00000533820 ETDBQ3ZM63 59 aa15.14■□□□□ 0.01
CAPN1-226ENST00000533820 SMIM20Q8N5G0 67 aa15.14■□□□□ 0.01
CAPN1-226ENST00000533820 C1RLQ9NZP8 487 aa15.14■□□□□ 0.01
CAPN1-226ENST00000533820 B5MCH6 92 aa15.13■□□□□ 0.01
CAPN1-226ENST00000533820 SH2D1AO60880 128 aa15.13■□□□□ 0.01
CAPN1-226ENST00000533820 BOD1L2Q8IYS8 172 aa15.13■□□□□ 0.01
CAPN1-226ENST00000533820 PRELID3AQ96N28 172 aa15.13■□□□□ 0.01
CAPN1-226ENST00000533820 SIGLEC8Q9NYZ4 499 aa15.13■□□□□ 0.01
CAPN1-226ENST00000533820 DPM3Q9P2X0 92 aa15.13■□□□□ 0.01
CAPN1-226ENST00000533820 NDPQ00604 133 aa15.12■□□□□ 0.01
CAPN1-226ENST00000533820 SAMD5Q5TGI4 173 aa15.12■□□□□ 0.01
CAPN1-226ENST00000533820 LINC01545Q5VT33 79 aa15.12■□□□□ 0.01
CAPN1-226ENST00000533820 IGHV3OR16-13A0A075B7E8 117 aa15.12■□□□□ 0.01
CAPN1-226ENST00000533820 IGHV3-74A0A0B4J1X5 117 aa15.12■□□□□ 0.01
CAPN1-226ENST00000533820 LY6LH3BQJ8 138 aa15.12■□□□□ 0.01
CAPN1-226ENST00000533820 J3QR89 54 aa15.12■□□□□ 0.01
CAPN1-226ENST00000533820 COX8AP10176 69 aa15.12■□□□□ 0.01
CAPN1-226ENST00000533820 ARPC1AQ92747 370 aa15.12■□□□□ 0.01
CAPN1-226ENST00000533820 SPATA25Q9BR10 227 aa15.12■□□□□ 0.01
CAPN1-226ENST00000533820 MRPL16Q9NX20 251 aaKnown RBP15.12■□□□□ 0.01
CAPN1-226ENST00000533820 PPIFP30405 207 aaKnown RBP15.11■□□□□ 0.01
CAPN1-226ENST00000533820 A0A096LNJ9 63 aa15.11■□□□□ 0.01
CAPN1-226ENST00000533820 MRPS12O15235 138 aaKnown RBP15.11■□□□□ 0.01
CAPN1-226ENST00000533820 SIVA1O15304 175 aa15.11■□□□□ 0.01
CAPN1-226ENST00000533820 CACNG7P62955 275 aa15.11■□□□□ 0.01
CAPN1-226ENST00000533820 TWIST1Q15672 202 aa15.11■□□□□ 0.01
CAPN1-226ENST00000533820 C18orf15Q96N68 181 aa15.11■□□□□ 0.01
CAPN1-226ENST00000533820 VGLL1Q99990 258 aa15.11■□□□□ 0.01
CAPN1-226ENST00000533820 MSRB1Q9NZV6 116 aa15.11■□□□□ 0.01
CAPN1-226ENST00000533820 IGHV3-66A0A0C4DH42 116 aa15.11■□□□□ 0.01
CAPN1-226ENST00000533820 FANCD2OSQ96PS1 177 aa15.11■□□□□ 0.01
CAPN1-226ENST00000533820 EGR2P11161 476 aaPredicted RBP15.09■□□□□ 0.01
CAPN1-226ENST00000533820 ZNF80P51504 273 aaPredicted RBP15.09■□□□□ 0.01
CAPN1-226ENST00000533820 SPANXB1Q9NS25 103 aaPredicted RBP15.09■□□□□ 0.01
CAPN1-226ENST00000533820 MFAP4P55083 255 aa15.09■□□□□ 0.01
CAPN1-226ENST00000533820 ANXA2RQ3ZCQ2 193 aa15.09■□□□□ 0.01
CAPN1-226ENST00000533820 MRPL51Q4U2R6 128 aaKnown RBP15.09■□□□□ 0.01
CAPN1-226ENST00000533820 DYNAPQ8N1N2 210 aa15.09■□□□□ 0.01
CAPN1-226ENST00000533820 GAS8-AS1O95177 125 aa15.08■□□□□ 0.01
CAPN1-226ENST00000533820 ORM1P02763 201 aa15.08■□□□□ 0.01
CAPN1-226ENST00000533820 SPINK8P0C7L1 97 aa15.08■□□□□ 0.01
CAPN1-226ENST00000533820 CKS2P33552 79 aa15.08■□□□□ 0
CAPN1-226ENST00000533820 PIP4P2Q8N4L2 257 aa15.08■□□□□ 0
CAPN1-226ENST00000533820 C20orf78Q9BR46 151 aa15.08■□□□□ 0
CAPN1-226ENST00000533820 C21orf62Q9NYP8 219 aa15.08■□□□□ 0
CAPN1-226ENST00000533820 WI2-2373I1.2A0A1W2PRP0 233 aa15.08■□□□□ 0
CAPN1-226ENST00000533820 NPYP01303 97 aa15.08■□□□□ 0
CAPN1-226ENST00000533820 CDSNQ15517 529 aa15.08■□□□□ 0
CAPN1-226ENST00000533820 FAM104BQ5XKR9 115 aa15.08■□□□□ 0
CAPN1-226ENST00000533820 IGHV3-49A0A0A0MS15 119 aa15.07■□□□□ 0
CAPN1-226ENST00000533820 K7ERJ3 54 aa15.07■□□□□ 0
CAPN1-226ENST00000533820 ORMDL3Q8N138 153 aa15.07■□□□□ 0
CAPN1-226ENST00000533820 CFHR4Q92496 578 aa15.07■□□□□ 0
CAPN1-226ENST00000533820 CELSR1Q9NYQ6 3014 aa15.07■□□□□ 0
CAPN1-226ENST00000533820 K7EMI3 77 aa15.07■□□□□ 0
CAPN1-226ENST00000533820 ERCC8Q13216 396 aa15.07■□□□□ 0
CAPN1-226ENST00000533820 MS4A6AQ9H2W1 248 aa15.07■□□□□ 0
CAPN1-226ENST00000533820 F8W735 103 aaPredicted RBP15.06■□□□□ 0
CAPN1-226ENST00000533820 FOXC1Q12948 553 aa15.06■□□□□ 0
CAPN1-226ENST00000533820 OR11H12B2RN74 326 aa15.06■□□□□ 0
CAPN1-226ENST00000533820 LYPD1Q8N2G4 141 aa15.06■□□□□ 0
CAPN1-226ENST00000533820 OR11H1Q8NG94 326 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms