RNA–Protein interactions for RNA: ENST00000531582.1

ECHDC1-221, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 4

Gene ECHDC1, Length 531 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-221ENST00000531582 ATXN8Q156A1 80 aa3.7□□□□□ -1.82
ECHDC1-221ENST00000531582 SP6Q3SY56 376 aa3.7□□□□□ -1.82
ECHDC1-221ENST00000531582 C10orf25Q5T742 122 aa3.7□□□□□ -1.82
ECHDC1-221ENST00000531582 FAM104BQ5XKR9 115 aa3.7□□□□□ -1.82
ECHDC1-221ENST00000531582 NDUFA11Q86Y39 141 aa3.7□□□□□ -1.82
ECHDC1-221ENST00000531582 CNRIP1Q96F85 164 aaPredicted RBP3.7□□□□□ -1.82
ECHDC1-221ENST00000531582 GFRA4Q9GZZ7 299 aa3.7□□□□□ -1.82
ECHDC1-221ENST00000531582 TAS2R4Q9NYW5 299 aa3.7□□□□□ -1.82
ECHDC1-221ENST00000531582 SLC25A15Q9Y619 301 aa3.7□□□□□ -1.82
ECHDC1-221ENST00000531582 TNRC18O15417 2968 aaPredicted RBP3.7□□□□□ -1.82
ECHDC1-221ENST00000531582 SZT2Q5T011 3432 aa3.7□□□□□ -1.82
ECHDC1-221ENST00000531582 IGKV6D-41A0A0C4DH26 115 aa3.69□□□□□ -1.82
ECHDC1-221ENST00000531582 A0A1B0GWA3 101 aa3.69□□□□□ -1.82
ECHDC1-221ENST00000531582 CPSF4LA6NMK7 179 aaKnown RBP3.69□□□□□ -1.82
ECHDC1-221ENST00000531582 SMKR1H3BMG3 65 aa3.69□□□□□ -1.82
ECHDC1-221ENST00000531582 C16orf97H3BN30 126 aa3.69□□□□□ -1.82
ECHDC1-221ENST00000531582 OVOL3O00110 214 aa3.69□□□□□ -1.82
ECHDC1-221ENST00000531582 CCL21O00585 134 aa3.69□□□□□ -1.82
ECHDC1-221ENST00000531582 SS18L1O75177 396 aaPredicted RBP3.69□□□□□ -1.82
ECHDC1-221ENST00000531582 LGALS3P17931 250 aaKnown RBP3.69□□□□□ -1.82
ECHDC1-221ENST00000531582 CCL1P22362 96 aa3.69□□□□□ -1.82
ECHDC1-221ENST00000531582 TMEM155Q4W5P6 130 aa3.69□□□□□ -1.82
ECHDC1-221ENST00000531582 LINC01590Q5TEZ4 76 aa3.69□□□□□ -1.82
ECHDC1-221ENST00000531582 PVRIGQ6DKI7 326 aa3.69□□□□□ -1.82
ECHDC1-221ENST00000531582 ZFP2Q6ZN57 461 aa3.69□□□□□ -1.82
ECHDC1-221ENST00000531582 KTN1-AS1Q86SY8 53 aa3.69□□□□□ -1.82
ECHDC1-221ENST00000531582 LY6G5BQ8NDX9 201 aa3.69□□□□□ -1.82
ECHDC1-221ENST00000531582 WFDC11Q8NEX6 87 aa3.69□□□□□ -1.82
ECHDC1-221ENST00000531582 C10orf105Q8TEF2 133 aa3.69□□□□□ -1.82
ECHDC1-221ENST00000531582 KLK6Q92876 244 aa3.69□□□□□ -1.82
ECHDC1-221ENST00000531582 EEF1AKMT3Q96AZ1 226 aa3.69□□□□□ -1.82
ECHDC1-221ENST00000531582 ZNF799Q96GE5 643 aa3.69□□□□□ -1.82
ECHDC1-221ENST00000531582 ZNF414Q96IQ9 312 aa3.69□□□□□ -1.82
ECHDC1-221ENST00000531582 HIST1H4GQ99525 98 aa3.69□□□□□ -1.82
ECHDC1-221ENST00000531582 HEATR1Q9H583 2144 aaKnown RBP3.69□□□□□ -1.82
ECHDC1-221ENST00000531582 FGF22Q9HCT0 170 aa3.69□□□□□ -1.82
ECHDC1-221ENST00000531582 TANC2Q9HCD6 1990 aa3.69□□□□□ -1.82
ECHDC1-221ENST00000531582 DYSFO75923 2080 aa3.68□□□□□ -1.82
ECHDC1-221ENST00000531582 A0A0B4J2C4 111 aa3.68□□□□□ -1.82
ECHDC1-221ENST00000531582 LOC107984156A0A0G2JMH3 177 aa3.68□□□□□ -1.82
ECHDC1-221ENST00000531582 SRSF10O75494 262 aaKnown RBP3.68□□□□□ -1.82
ECHDC1-221ENST00000531582 IGKV1D-33P01593 117 aa3.68□□□□□ -1.82
ECHDC1-221ENST00000531582 IGKV1-33P01594 117 aa3.68□□□□□ -1.82
ECHDC1-221ENST00000531582 HMGA1P17096 107 aaKnown RBP3.68□□□□□ -1.82
ECHDC1-221ENST00000531582 MFAP2P55001 183 aa3.68□□□□□ -1.82
ECHDC1-221ENST00000531582 SYNJ2BPP57105 145 aa3.68□□□□□ -1.82
ECHDC1-221ENST00000531582 WDR38Q5JTN6 314 aa3.68□□□□□ -1.82
ECHDC1-221ENST00000531582 LINC00173Q6ZV60 143 aa3.68□□□□□ -1.82
ECHDC1-221ENST00000531582 FP248Q71RG6 208 aaPredicted RBP3.68□□□□□ -1.82
ECHDC1-221ENST00000531582 ARL17AQ8IVW1 177 aa3.68□□□□□ -1.82
ECHDC1-221ENST00000531582 DEFB106AQ8N104 65 aa3.68□□□□□ -1.82
ECHDC1-221ENST00000531582 C11orf45Q8TAV5 145 aa3.68□□□□□ -1.82
ECHDC1-221ENST00000531582 SLC25A22Q9H936 323 aa3.68□□□□□ -1.82
ECHDC1-221ENST00000531582 RBM12B-AS1Q9P1G2 102 aa3.68□□□□□ -1.82
ECHDC1-221ENST00000531582 LSM4Q9Y4Z0 139 aaKnown RBP3.68□□□□□ -1.82
ECHDC1-221ENST00000531582 COL4A5P29400 1685 aa3.68□□□□□ -1.82
ECHDC1-221ENST00000531582 C2orf16Q68DN1 1984 aa3.67□□□□□ -1.82
ECHDC1-221ENST00000531582 GOLGA4Q13439 2230 aaKnown RBP3.67□□□□□ -1.82
ECHDC1-221ENST00000531582 A0A0D9SEW6 157 aa3.67□□□□□ -1.82
ECHDC1-221ENST00000531582 LINC01553A4QN01 128 aa3.67□□□□□ -1.82
ECHDC1-221ENST00000531582 DNAJC9-AS1A6NH13 148 aa3.67□□□□□ -1.82
ECHDC1-221ENST00000531582 H3BVH4 76 aa3.67□□□□□ -1.82
ECHDC1-221ENST00000531582 K7EMT4 169 aa3.67□□□□□ -1.82
ECHDC1-221ENST00000531582 PEX7O00628 323 aa3.67□□□□□ -1.82
ECHDC1-221ENST00000531582 SAA4P35542 130 aa3.67□□□□□ -1.82
ECHDC1-221ENST00000531582 NCBP2P52298 156 aaKnown RBP eCLIP3.67□□□□□ -1.82
ECHDC1-221ENST00000531582 ZNF816Q0VGE8 651 aaPredicted RBP3.67□□□□□ -1.82
ECHDC1-221ENST00000531582 TMEM52BQ4KMG9 183 aa3.67□□□□□ -1.82
ECHDC1-221ENST00000531582 ORMDL2Q53FV1 153 aa3.67□□□□□ -1.82
ECHDC1-221ENST00000531582 ZNF497Q6ZNH5 498 aa3.67□□□□□ -1.82
ECHDC1-221ENST00000531582 PRR26Q8N8Z3 221 aa3.67□□□□□ -1.82
ECHDC1-221ENST00000531582 VSIG2Q96IQ7 327 aa3.67□□□□□ -1.82
ECHDC1-221ENST00000531582 METTL26Q96S19 204 aa3.67□□□□□ -1.82
ECHDC1-221ENST00000531582 WFDC6Q9BQY6 131 aa3.67□□□□□ -1.82
ECHDC1-221ENST00000531582 TMEM167BQ9NRX6 74 aa3.67□□□□□ -1.82
ECHDC1-221ENST00000531582 PSENENQ9NZ42 101 aa3.67□□□□□ -1.82
ECHDC1-221ENST00000531582 ZNF492Q9P255 531 aa3.67□□□□□ -1.82
ECHDC1-221ENST00000531582 COL5A1P20908 1838 aaPredicted RBP3.67□□□□□ -1.82
ECHDC1-221ENST00000531582 TRBV27A0A0K0K1C4 114 aa3.66□□□□□ -1.82
ECHDC1-221ENST00000531582 LINC01549A6NIU2 74 aa3.66□□□□□ -1.82
ECHDC1-221ENST00000531582 UBE2L6O14933 153 aa3.66□□□□□ -1.82
ECHDC1-221ENST00000531582 FRMD6-AS1P0C7T7 363 aa3.66□□□□□ -1.82
ECHDC1-221ENST00000531582 SLC25A16P16260 332 aa3.66□□□□□ -1.82
ECHDC1-221ENST00000531582 ZNF823P16415 610 aa3.66□□□□□ -1.82
ECHDC1-221ENST00000531582 MYCNOSP40205 109 aa3.66□□□□□ -1.82
ECHDC1-221ENST00000531582 FHL5Q5TD97 284 aa3.66□□□□□ -1.82
ECHDC1-221ENST00000531582 MIC13Q5XKP0 118 aa3.66□□□□□ -1.82
ECHDC1-221ENST00000531582 CEMP1Q6PRD7 247 aaPredicted RBP3.66□□□□□ -1.82
ECHDC1-221ENST00000531582 WDR86Q86TI4 376 aa3.66□□□□□ -1.82
ECHDC1-221ENST00000531582 SPATA3Q8NHX4 192 aa3.66□□□□□ -1.82
ECHDC1-221ENST00000531582 TMEM243Q9BU79 118 aa3.66□□□□□ -1.82
ECHDC1-221ENST00000531582 Q9H8V8 135 aa3.66□□□□□ -1.82
ECHDC1-221ENST00000531582 WDR83OSQ9Y284 106 aa3.66□□□□□ -1.82
ECHDC1-221ENST00000531582 WI2-2373I1.2A0A1W2PRP0 233 aa3.65□□□□□ -1.83
ECHDC1-221ENST00000531582 LINC01546A6NGU7 62 aa3.65□□□□□ -1.83
ECHDC1-221ENST00000531582 PRR32B1ATL7 298 aa3.65□□□□□ -1.83
ECHDC1-221ENST00000531582 INS-IGF2F8WCM5 200 aa3.65□□□□□ -1.83
ECHDC1-221ENST00000531582 LYPD3O95274 346 aa3.65□□□□□ -1.83
ECHDC1-221ENST00000531582 LTAP01374 205 aa3.65□□□□□ -1.83
ECHDC1-221ENST00000531582 IFI27P40305 119 aaPredicted RBP3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms