RNA–Protein interactions for RNA: ENST00000530893.6

BRCA2-204, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA2, Length 2,011 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-204ENST00000530893 D6R8Y8 96 aa13.27□□□□□ -0.29
BRCA2-204ENST00000530893 LINC01559Q495D7 138 aa13.27□□□□□ -0.29
BRCA2-204ENST00000530893 LINC00173Q6ZV60 143 aa13.27□□□□□ -0.29
BRCA2-204ENST00000530893 PIFOQ8TCI5 191 aa13.27□□□□□ -0.29
BRCA2-204ENST00000530893 IGF1P05019 195 aa13.26□□□□□ -0.29
BRCA2-204ENST00000530893 TMEM219Q86XT9 240 aa13.26□□□□□ -0.29
BRCA2-204ENST00000530893 PRELID3AQ96N28 172 aa13.26□□□□□ -0.29
BRCA2-204ENST00000530893 IGHV4-61A0A0C4DH41 118 aa13.25□□□□□ -0.29
BRCA2-204ENST00000530893 AMN1Q8IY45 258 aa13.25□□□□□ -0.29
BRCA2-204ENST00000530893 CSMD1Q96PZ7 3565 aa13.25□□□□□ -0.29
BRCA2-204ENST00000530893 TRAV40A0A0B4J280 105 aa13.25□□□□□ -0.29
BRCA2-204ENST00000530893 HSBP1L1C9JCN9 74 aa13.25□□□□□ -0.29
BRCA2-204ENST00000530893 H3BUA1 57 aa13.25□□□□□ -0.29
BRCA2-204ENST00000530893 ORM1P02763 201 aa13.25□□□□□ -0.29
BRCA2-204ENST00000530893 TWIST1Q15672 202 aa13.25□□□□□ -0.29
BRCA2-204ENST00000530893 BATFQ16520 125 aa13.25□□□□□ -0.29
BRCA2-204ENST00000530893 CLEC2AQ6UVW9 174 aa13.25□□□□□ -0.29
BRCA2-204ENST00000530893 PPP1R14DQ9NXH3 145 aa13.25□□□□□ -0.29
BRCA2-204ENST00000530893 HIST1H1AQ02539 215 aaPredicted RBP13.24□□□□□ -0.29
BRCA2-204ENST00000530893 MRPL51Q4U2R6 128 aaKnown RBP13.24□□□□□ -0.29
BRCA2-204ENST00000530893 LINC01545Q5VT33 79 aa13.24□□□□□ -0.29
BRCA2-204ENST00000530893 ZNF575Q86XF7 245 aa13.24□□□□□ -0.29
BRCA2-204ENST00000530893 ZNF747Q9BV97 191 aa13.24□□□□□ -0.29
BRCA2-204ENST00000530893 PRAC2D3DTV9 90 aa13.23□□□□□ -0.29
BRCA2-204ENST00000530893 PPBPP02775 128 aa13.23□□□□□ -0.29
BRCA2-204ENST00000530893 ERCC8Q13216 396 aa13.23□□□□□ -0.29
BRCA2-204ENST00000530893 C8orf86Q6ZUL3 223 aa13.23□□□□□ -0.29
BRCA2-204ENST00000530893 RNF182Q8N6D2 247 aa13.23□□□□□ -0.29
BRCA2-204ENST00000530893 PSMG3-AS1Q96PY0 264 aa13.23□□□□□ -0.29
BRCA2-204ENST00000530893 SIGLEC8Q9NYZ4 499 aa13.23□□□□□ -0.29
BRCA2-204ENST00000530893 TRGV3P03979 118 aa13.23□□□□□ -0.29
BRCA2-204ENST00000530893 IFI27P40305 119 aaPredicted RBP13.23□□□□□ -0.29
BRCA2-204ENST00000530893 TMEM78Q5T7P6 136 aa13.23□□□□□ -0.29
BRCA2-204ENST00000530893 MS4A6AQ9H2W1 248 aa13.23□□□□□ -0.29
BRCA2-204ENST00000530893 ASH1LQ9NR48 2969 aaKnown RBP13.22□□□□□ -0.29
BRCA2-204ENST00000530893 TRAV8-2A0A0B4J237 113 aa13.22□□□□□ -0.29
BRCA2-204ENST00000530893 IGHV3-66A0A0C4DH42 116 aa13.22□□□□□ -0.29
BRCA2-204ENST00000530893 TMEM8BA6NDV4 472 aa13.22□□□□□ -0.29
BRCA2-204ENST00000530893 ZNF25P17030 456 aaPredicted RBP13.22□□□□□ -0.29
BRCA2-204ENST00000530893 CKS2P33552 79 aa13.22□□□□□ -0.29
BRCA2-204ENST00000530893 GAGE1Q13065 139 aa13.22□□□□□ -0.29
BRCA2-204ENST00000530893 BRD3OSQ6XYD6 125 aa13.22□□□□□ -0.29
BRCA2-204ENST00000530893 C9orf47Q6ZRZ4 202 aa13.22□□□□□ -0.29
BRCA2-204ENST00000530893 USMG5Q96IX5 58 aa13.22□□□□□ -0.29
BRCA2-204ENST00000530893 IL17RELQ6ZVW7 336 aa13.22□□□□□ -0.29
BRCA2-204ENST00000530893 AGPAT4-IT1Q9H0P7 198 aa13.22□□□□□ -0.29
BRCA2-204ENST00000530893 IGHV3OR16-10A0A075B7F0 116 aa13.21□□□□□ -0.29
BRCA2-204ENST00000530893 NDUFA4O00483 81 aa13.21□□□□□ -0.29
BRCA2-204ENST00000530893 IGHG2P01859 326 aa13.21□□□□□ -0.29
BRCA2-204ENST00000530893 ARL3P36405 182 aa13.21□□□□□ -0.29
BRCA2-204ENST00000530893 C9orf139Q6ZV77 190 aa13.21□□□□□ -0.29
BRCA2-204ENST00000530893 NPFFR1Q9GZQ6 430 aa13.21□□□□□ -0.29
BRCA2-204ENST00000530893 ABCA2Q9BZC7 2435 aa13.21□□□□□ -0.29
BRCA2-204ENST00000530893 GLMPQ8WWB7 406 aa13.2□□□□□ -0.3
BRCA2-204ENST00000530893 LENEPQ9Y5L5 61 aa13.2□□□□□ -0.3
BRCA2-204ENST00000530893 ATP5J2P56134 94 aa13.2□□□□□ -0.3
BRCA2-204ENST00000530893 TMEM208Q9BTX3 173 aa13.2□□□□□ -0.3
BRCA2-204ENST00000530893 IGHV3OR16-13A0A075B7E8 117 aa13.19□□□□□ -0.3
BRCA2-204ENST00000530893 IGHV3-74A0A0B4J1X5 117 aa13.19□□□□□ -0.3
BRCA2-204ENST00000530893 A6NDX4 124 aa13.19□□□□□ -0.3
BRCA2-204ENST00000530893 MSMBP08118 114 aa13.19□□□□□ -0.3
BRCA2-204ENST00000530893 PPIFP30405 207 aaKnown RBP13.19□□□□□ -0.3
BRCA2-204ENST00000530893 AKAP6Q13023 2319 aa13.19□□□□□ -0.3
BRCA2-204ENST00000530893 A0A096LNJ9 63 aa13.18□□□□□ -0.3
BRCA2-204ENST00000530893 LOC389332A0A1B0GUA5 103 aa13.18□□□□□ -0.3
BRCA2-204ENST00000530893 DLEU1O43261 78 aa13.18□□□□□ -0.3
BRCA2-204ENST00000530893 ZNF207O43670 478 aaKnown RBP13.18□□□□□ -0.3
BRCA2-204ENST00000530893 TCF21O43680 179 aa13.18□□□□□ -0.3
BRCA2-204ENST00000530893 IGHV4-38-2P0DP08 117 aa13.18□□□□□ -0.3
BRCA2-204ENST00000530893 G0S2P27469 103 aa13.18□□□□□ -0.3
BRCA2-204ENST00000530893 STPG4Q8N801 248 aa13.18□□□□□ -0.3
BRCA2-204ENST00000530893 C16orf92Q96LL3 132 aa13.18□□□□□ -0.3
BRCA2-204ENST00000530893 MUC21A0A0G2JKD1 596 aa13.18□□□□□ -0.3
BRCA2-204ENST00000530893 MUC21A0A140T8X8 626 aa13.18□□□□□ -0.3
BRCA2-204ENST00000530893 hDV102S1A0JD36 115 aa13.18□□□□□ -0.3
BRCA2-204ENST00000530893 HBDP02042 147 aa13.18□□□□□ -0.3
BRCA2-204ENST00000530893 MUC21Q5SSG8 566 aa13.18□□□□□ -0.3
BRCA2-204ENST00000530893 SLC25A34Q6PIV7 304 aa13.18□□□□□ -0.3
BRCA2-204ENST00000530893 RNF185Q96GF1 192 aa13.18□□□□□ -0.3
BRCA2-204ENST00000530893 SVEP1Q4LDE5 3571 aa13.18□□□□□ -0.3
BRCA2-204ENST00000530893 IGHV3-49A0A0A0MS15 119 aa13.17□□□□□ -0.3
BRCA2-204ENST00000530893 IGKV3D-20A0A0C4DH25 116 aa13.17□□□□□ -0.3
BRCA2-204ENST00000530893 LINC01546A6NGU7 62 aa13.17□□□□□ -0.3
BRCA2-204ENST00000530893 NPYP01303 97 aa13.17□□□□□ -0.3
BRCA2-204ENST00000530893 DPF1Q92782 380 aa13.17□□□□□ -0.3
BRCA2-204ENST00000530893 SCRT2Q9NQ03 307 aa13.17□□□□□ -0.3
BRCA2-204ENST00000530893 LINC00527Q9UJ94 153 aa13.17□□□□□ -0.3
BRCA2-204ENST00000530893 IGHV4-30-2A0A087WSY4 118 aa13.17□□□□□ -0.3
BRCA2-204ENST00000530893 H3BUX3 64 aa13.17□□□□□ -0.3
BRCA2-204ENST00000530893 FAM106AQ4KMX7 169 aa13.17□□□□□ -0.3
BRCA2-204ENST00000530893 MAP1LC3AQ9H492 121 aa13.17□□□□□ -0.3
BRCA2-204ENST00000530893 TIMM8BQ9Y5J9 83 aaPredicted RBP13.17□□□□□ -0.3
BRCA2-204ENST00000530893 GATA3P23771 443 aa13.16□□□□□ -0.3
BRCA2-204ENST00000530893 DSCR9P59020 149 aa13.16□□□□□ -0.3
BRCA2-204ENST00000530893 LGALS9BQ3B8N2 356 aa13.16□□□□□ -0.3
BRCA2-204ENST00000530893 LGALS9CQ6DKI2 356 aa13.16□□□□□ -0.3
BRCA2-204ENST00000530893 SPOCK3Q9BQ16 436 aa13.16□□□□□ -0.3
BRCA2-204ENST00000530893 CACNA1BQ00975 2339 aa13.16□□□□□ -0.3
BRCA2-204ENST00000530893 H0Y8G0 127 aa13.15□□□□□ -0.3
BRCA2-204ENST00000530893 LOXL1Q08397 574 aaPredicted RBP13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms