RNA–Protein interactions for RNA: ENST00000530746.1

PPFIA1-216, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 3

Gene PPFIA1, Length 575 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-216ENST00000530746 OR10G9Q8NGN4 311 aa10.69□□□□□ -0.7
PPFIA1-216ENST00000530746 OR10G7Q8NGN6 311 aa10.69□□□□□ -0.7
PPFIA1-216ENST00000530746 ZNF503Q96F45 646 aa10.69□□□□□ -0.7
PPFIA1-216ENST00000530746 ODF3Q96PU9 254 aa10.69□□□□□ -0.7
PPFIA1-216ENST00000530746 DKK2Q9UBU2 259 aa10.69□□□□□ -0.7
PPFIA1-216ENST00000530746 YTHDF2Q9Y5A9 579 aaKnown RBP10.69□□□□□ -0.7
PPFIA1-216ENST00000530746 ZNF705GA8MUZ8 300 aaPredicted RBP10.68□□□□□ -0.7
PPFIA1-216ENST00000530746 PRM2P04554 102 aa10.68□□□□□ -0.7
PPFIA1-216ENST00000530746 CT45A10P0DMU9 189 aa10.68□□□□□ -0.7
PPFIA1-216ENST00000530746 TCTAP57738 103 aa10.68□□□□□ -0.7
PPFIA1-216ENST00000530746 FAM222AQ5U5X8 452 aa10.68□□□□□ -0.7
PPFIA1-216ENST00000530746 LINC01587Q99440 93 aa10.68□□□□□ -0.7
PPFIA1-216ENST00000530746 C20orf144Q9BQM9 153 aa10.68□□□□□ -0.7
PPFIA1-216ENST00000530746 SH3BGRL3Q9H299 93 aa10.68□□□□□ -0.7
PPFIA1-216ENST00000530746 VPS13DQ5THJ4 4388 aa10.67□□□□□ -0.7
PPFIA1-216ENST00000530746 IGLL5B9A064 214 aa10.67□□□□□ -0.7
PPFIA1-216ENST00000530746 LY6G6CO95867 125 aa10.67□□□□□ -0.7
PPFIA1-216ENST00000530746 LEPP41159 167 aa10.67□□□□□ -0.7
PPFIA1-216ENST00000530746 TAS2R60P59551 318 aa10.67□□□□□ -0.7
PPFIA1-216ENST00000530746 RAB2AP61019 212 aa10.67□□□□□ -0.7
PPFIA1-216ENST00000530746 UBE2L3P68036 154 aaKnown RBP10.67□□□□□ -0.7
PPFIA1-216ENST00000530746 KIR3DS1Q14943 382 aa10.67□□□□□ -0.7
PPFIA1-216ENST00000530746 FAM122CQ6P4D5 195 aa10.67□□□□□ -0.7
PPFIA1-216ENST00000530746 PHYHIPLQ96FC7 376 aa10.67□□□□□ -0.7
PPFIA1-216ENST00000530746 ACTR3CQ9C0K3 210 aaPredicted RBP10.67□□□□□ -0.7
PPFIA1-216ENST00000530746 DEFB131BA0A096LNP1 70 aa10.66□□□□□ -0.7
PPFIA1-216ENST00000530746 H7BYZ3 331 aa10.66□□□□□ -0.7
PPFIA1-216ENST00000530746 CDC34P49427 236 aaPredicted RBP10.66□□□□□ -0.7
PPFIA1-216ENST00000530746 ERCC8Q13216 396 aa10.66□□□□□ -0.7
PPFIA1-216ENST00000530746 GFI1BQ5VTD9 330 aa10.66□□□□□ -0.7
PPFIA1-216ENST00000530746 PQLC2Q6ZP29 291 aa10.66□□□□□ -0.7
PPFIA1-216ENST00000530746 LYPD1Q8N2G4 141 aa10.66□□□□□ -0.7
PPFIA1-216ENST00000530746 LINC00477Q96M19 166 aa10.66□□□□□ -0.7
PPFIA1-216ENST00000530746 NIPSNAP3BQ9BS92 247 aa10.66□□□□□ -0.7
PPFIA1-216ENST00000530746 AGPAT4-IT1Q9H0P7 198 aa10.66□□□□□ -0.7
PPFIA1-216ENST00000530746 EIF3GO75821 320 aaKnown RBP eCLIP10.65□□□□□ -0.7
PPFIA1-216ENST00000530746 HTN1P15515 57 aa10.65□□□□□ -0.7
PPFIA1-216ENST00000530746 AZU1P20160 251 aa10.65□□□□□ -0.7
PPFIA1-216ENST00000530746 RAB5CP51148 216 aa10.65□□□□□ -0.7
PPFIA1-216ENST00000530746 RANP62826 216 aaKnown RBP10.65□□□□□ -0.7
PPFIA1-216ENST00000530746 DPPA3Q6W0C5 159 aa10.65□□□□□ -0.7
PPFIA1-216ENST00000530746 C9orf47Q6ZRZ4 202 aa10.65□□□□□ -0.7
PPFIA1-216ENST00000530746 APLNQ9ULZ1 77 aa10.65□□□□□ -0.7
PPFIA1-216ENST00000530746 IGKV2-40A0A087WW87 121 aaPredicted RBP10.64□□□□□ -0.71
PPFIA1-216ENST00000530746 PLAC8L1A1L4L8 177 aa10.64□□□□□ -0.71
PPFIA1-216ENST00000530746 LYRM9A8MSI8 78 aa10.64□□□□□ -0.71
PPFIA1-216ENST00000530746 J3KRW8 73 aa10.64□□□□□ -0.71
PPFIA1-216ENST00000530746 IGKV2D-40P01614 121 aaPredicted RBP10.64□□□□□ -0.71
PPFIA1-216ENST00000530746 LGALS9CQ6DKI2 356 aa10.64□□□□□ -0.71
PPFIA1-216ENST00000530746 RAB24Q969Q5 203 aa10.64□□□□□ -0.71
PPFIA1-216ENST00000530746 C16orf74Q96GX8 76 aa10.64□□□□□ -0.71
PPFIA1-216ENST00000530746 FAM19A4Q96LR4 140 aa10.64□□□□□ -0.71
PPFIA1-216ENST00000530746 Q9H3A6 140 aa10.64□□□□□ -0.71
PPFIA1-216ENST00000530746 PLA2G2EQ9NZK7 142 aa10.64□□□□□ -0.71
PPFIA1-216ENST00000530746 KMT2AQ03164 3969 aa10.63□□□□□ -0.71
PPFIA1-216ENST00000530746 IGHV4-4A0A075B6R2 117 aa10.63□□□□□ -0.71
PPFIA1-216ENST00000530746 TRAV12-3A0A0B4J271 114 aa10.63□□□□□ -0.71
PPFIA1-216ENST00000530746 CTXND1A0A1B0GTU2 59 aa10.63□□□□□ -0.71
PPFIA1-216ENST00000530746 CXorf1O96002 111 aa10.63□□□□□ -0.71
PPFIA1-216ENST00000530746 SLC25A5P05141 298 aaKnown RBP10.63□□□□□ -0.71
PPFIA1-216ENST00000530746 STAG3L2P0CL84 134 aa10.63□□□□□ -0.71
PPFIA1-216ENST00000530746 STAG3L3P0CL85 134 aa10.63□□□□□ -0.71
PPFIA1-216ENST00000530746 CSN1S1P47710 185 aa10.63□□□□□ -0.71
PPFIA1-216ENST00000530746 TMEM78Q5T7P6 136 aa10.63□□□□□ -0.71
PPFIA1-216ENST00000530746 ZNF493Q6ZR52 646 aa10.63□□□□□ -0.71
PPFIA1-216ENST00000530746 VGLL1Q99990 258 aa10.63□□□□□ -0.71
PPFIA1-216ENST00000530746 KLLNB2CW77 178 aa10.62□□□□□ -0.71
PPFIA1-216ENST00000530746 HMGB3O15347 200 aaKnown RBP10.62□□□□□ -0.71
PPFIA1-216ENST00000530746 NMBP08949 121 aa10.62□□□□□ -0.71
PPFIA1-216ENST00000530746 CRISP2P16562 243 aa10.62□□□□□ -0.71
PPFIA1-216ENST00000530746 NKX2-5P52952 324 aaPredicted RBP10.62□□□□□ -0.71
PPFIA1-216ENST00000530746 DAD1P61803 113 aa10.62□□□□□ -0.71
PPFIA1-216ENST00000530746 RNASE8Q8TDE3 154 aaKnown RBP10.62□□□□□ -0.71
PPFIA1-216ENST00000530746 TMEM263Q8WUH6 116 aaKnown RBP10.62□□□□□ -0.71
PPFIA1-216ENST00000530746 TMED6Q8WW62 240 aa10.62□□□□□ -0.71
PPFIA1-216ENST00000530746 ZNF492Q9P255 531 aa10.62□□□□□ -0.71
PPFIA1-216ENST00000530746 C7orf71A4D174 169 aa10.61□□□□□ -0.71
PPFIA1-216ENST00000530746 RBAKDNA6NC62 111 aa10.61□□□□□ -0.71
PPFIA1-216ENST00000530746 RXFP4Q8TDU9 374 aa10.61□□□□□ -0.71
PPFIA1-216ENST00000530746 PYGO2Q9BRQ0 406 aa10.61□□□□□ -0.71
PPFIA1-216ENST00000530746 OTORQ9NRC9 128 aa10.61□□□□□ -0.71
PPFIA1-216ENST00000530746 TMEM167BQ9NRX6 74 aa10.61□□□□□ -0.71
PPFIA1-216ENST00000530746 PGPA6NDG6 321 aa10.6□□□□□ -0.71
PPFIA1-216ENST00000530746 DIRC3C9JPN6 131 aa10.6□□□□□ -0.71
PPFIA1-216ENST00000530746 GPX1P07203 203 aa10.6□□□□□ -0.71
PPFIA1-216ENST00000530746 ARL14EPLP0DKL9 152 aa10.6□□□□□ -0.71
PPFIA1-216ENST00000530746 ZNF138P52744 262 aa10.6□□□□□ -0.71
PPFIA1-216ENST00000530746 FAM74A1Q5RGS3 127 aa10.6□□□□□ -0.71
PPFIA1-216ENST00000530746 CCDC28AQ8IWP9 274 aa10.6□□□□□ -0.71
PPFIA1-216ENST00000530746 NDUFAF3Q9BU61 184 aa10.6□□□□□ -0.71
PPFIA1-216ENST00000530746 TIMM8BQ9Y5J9 83 aaPredicted RBP10.6□□□□□ -0.71
PPFIA1-216ENST00000530746 DNAH6Q9C0G6 4158 aa10.59□□□□□ -0.71
PPFIA1-216ENST00000530746 TRBV7-9A0A0J9YWB2 115 aa10.59□□□□□ -0.71
PPFIA1-216ENST00000530746 TEX46H3BTG2 121 aa10.59□□□□□ -0.71
PPFIA1-216ENST00000530746 ZNF324O75467 553 aaPredicted RBP10.59□□□□□ -0.71
PPFIA1-216ENST00000530746 DEFB130BP0DP73 79 aa10.59□□□□□ -0.71
PPFIA1-216ENST00000530746 DEFB130AP0DP74 79 aa10.59□□□□□ -0.71
PPFIA1-216ENST00000530746 HTN3P15516 51 aa10.59□□□□□ -0.71
PPFIA1-216ENST00000530746 RNASE4P34096 147 aaKnown RBP10.59□□□□□ -0.71
PPFIA1-216ENST00000530746 SULT1A2P50226 295 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 139.7 ms