RNA–Protein interactions for RNA: ENST00000522720.1

PABPC1-221, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 4

Gene PABPC1, Length 593 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-221ENST00000522720 IGLL5B9A064 214 aa11.7□□□□□ -0.54
PABPC1-221ENST00000522720 LY6G6CO95867 125 aa11.7□□□□□ -0.54
PABPC1-221ENST00000522720 MBP02144 154 aa11.7□□□□□ -0.54
PABPC1-221ENST00000522720 SEC11BP0C7V7 166 aa11.7□□□□□ -0.54
PABPC1-221ENST00000522720 TAS2R45P59539 299 aa11.7□□□□□ -0.54
PABPC1-221ENST00000522720 TAS2R60P59551 318 aa11.7□□□□□ -0.54
PABPC1-221ENST00000522720 KIR3DS1Q14943 382 aa11.7□□□□□ -0.54
PABPC1-221ENST00000522720 C20orf144Q9BQM9 153 aa11.7□□□□□ -0.54
PABPC1-221ENST00000522720 NIPSNAP3BQ9BS92 247 aa11.7□□□□□ -0.54
PABPC1-221ENST00000522720 PSMG3Q9BT73 122 aaPredicted RBP11.7□□□□□ -0.54
PABPC1-221ENST00000522720 DEFB131BA0A096LNP1 70 aa11.69□□□□□ -0.54
PABPC1-221ENST00000522720 AZU1P20160 251 aa11.69□□□□□ -0.54
PABPC1-221ENST00000522720 LEPP41159 167 aa11.69□□□□□ -0.54
PABPC1-221ENST00000522720 KHDC3LQ587J8 217 aa11.69□□□□□ -0.54
PABPC1-221ENST00000522720 HSD17B11Q8NBQ5 300 aa11.69□□□□□ -0.54
PABPC1-221ENST00000522720 LINC00477Q96M19 166 aa11.69□□□□□ -0.54
PABPC1-221ENST00000522720 BOLA1Q9Y3E2 137 aa11.69□□□□□ -0.54
PABPC1-221ENST00000522720 A0A1W2PPV4 95 aa11.68□□□□□ -0.54
PABPC1-221ENST00000522720 H7BYZ3 331 aa11.68□□□□□ -0.54
PABPC1-221ENST00000522720 IFNA7P01567 189 aa11.68□□□□□ -0.54
PABPC1-221ENST00000522720 ATP6V0CP27449 155 aa11.68□□□□□ -0.54
PABPC1-221ENST00000522720 UBE2L3P68036 154 aaKnown RBP11.68□□□□□ -0.54
PABPC1-221ENST00000522720 ERCC8Q13216 396 aa11.68□□□□□ -0.54
PABPC1-221ENST00000522720 GFI1BQ5VTD9 330 aa11.68□□□□□ -0.54
PABPC1-221ENST00000522720 FAM122CQ6P4D5 195 aa11.68□□□□□ -0.54
PABPC1-221ENST00000522720 C9orf47Q6ZRZ4 202 aa11.68□□□□□ -0.54
PABPC1-221ENST00000522720 LYPD1Q8N2G4 141 aa11.68□□□□□ -0.54
PABPC1-221ENST00000522720 OR2G3Q8NGZ4 309 aa11.68□□□□□ -0.54
PABPC1-221ENST00000522720 AGPAT4-IT1Q9H0P7 198 aa11.68□□□□□ -0.54
PABPC1-221ENST00000522720 PLA2G2EQ9NZK7 142 aa11.68□□□□□ -0.54
PABPC1-221ENST00000522720 UMAD1C9J7I0 102 aa11.67□□□□□ -0.54
PABPC1-221ENST00000522720 RAB5CP51148 216 aa11.67□□□□□ -0.54
PABPC1-221ENST00000522720 RAB2AP61019 212 aa11.67□□□□□ -0.54
PABPC1-221ENST00000522720 RANP62826 216 aaKnown RBP11.67□□□□□ -0.54
PABPC1-221ENST00000522720 LGALS9CQ6DKI2 356 aa11.67□□□□□ -0.54
PABPC1-221ENST00000522720 OR10G4Q8NGN3 311 aa11.67□□□□□ -0.54
PABPC1-221ENST00000522720 OR10G9Q8NGN4 311 aa11.67□□□□□ -0.54
PABPC1-221ENST00000522720 OR10G7Q8NGN6 311 aa11.67□□□□□ -0.54
PABPC1-221ENST00000522720 APLNQ9ULZ1 77 aa11.67□□□□□ -0.54
PABPC1-221ENST00000522720 IGKV2-40A0A087WW87 121 aaPredicted RBP11.66□□□□□ -0.54
PABPC1-221ENST00000522720 PLAC8L1A1L4L8 177 aa11.66□□□□□ -0.54
PABPC1-221ENST00000522720 EIF3GO75821 320 aaKnown RBP eCLIP11.66□□□□□ -0.54
PABPC1-221ENST00000522720 IGKV2D-40P01614 121 aaPredicted RBP11.66□□□□□ -0.54
PABPC1-221ENST00000522720 HTN1P15515 57 aa11.66□□□□□ -0.54
PABPC1-221ENST00000522720 PQLC2Q6ZP29 291 aa11.66□□□□□ -0.54
PABPC1-221ENST00000522720 ZNF493Q6ZR52 646 aa11.66□□□□□ -0.54
PABPC1-221ENST00000522720 FAM19A4Q96LR4 140 aa11.66□□□□□ -0.54
PABPC1-221ENST00000522720 VGLL1Q99990 258 aa11.66□□□□□ -0.54
PABPC1-221ENST00000522720 Q9H3A6 140 aa11.66□□□□□ -0.54
PABPC1-221ENST00000522720 IGHV4-4A0A075B6R2 117 aa11.65□□□□□ -0.54
PABPC1-221ENST00000522720 LYRM9A8MSI8 78 aa11.65□□□□□ -0.54
PABPC1-221ENST00000522720 J3KRW8 73 aa11.65□□□□□ -0.54
PABPC1-221ENST00000522720 SLC25A5P05141 298 aaKnown RBP11.65□□□□□ -0.54
PABPC1-221ENST00000522720 CSN1S1P47710 185 aa11.65□□□□□ -0.54
PABPC1-221ENST00000522720 AKR1C8PQ5T2L2 129 aa11.65□□□□□ -0.54
PABPC1-221ENST00000522720 TEX261Q6UWH6 196 aa11.65□□□□□ -0.54
PABPC1-221ENST00000522720 C16orf74Q96GX8 76 aa11.65□□□□□ -0.54
PABPC1-221ENST00000522720 TRAV12-3A0A0B4J271 114 aa11.64□□□□□ -0.55
PABPC1-221ENST00000522720 KLLNB2CW77 178 aa11.64□□□□□ -0.55
PABPC1-221ENST00000522720 CRISP2P16562 243 aa11.64□□□□□ -0.55
PABPC1-221ENST00000522720 DAD1P61803 113 aa11.64□□□□□ -0.55
PABPC1-221ENST00000522720 TMEM78Q5T7P6 136 aa11.64□□□□□ -0.55
PABPC1-221ENST00000522720 DPPA3Q6W0C5 159 aa11.64□□□□□ -0.55
PABPC1-221ENST00000522720 RNASE8Q8TDE3 154 aaKnown RBP11.64□□□□□ -0.55
PABPC1-221ENST00000522720 TMEM263Q8WUH6 116 aaKnown RBP11.64□□□□□ -0.55
PABPC1-221ENST00000522720 C7orf71A4D174 169 aa11.63□□□□□ -0.55
PABPC1-221ENST00000522720 RBAKDNA6NC62 111 aa11.63□□□□□ -0.55
PABPC1-221ENST00000522720 HMGB3O15347 200 aaKnown RBP11.63□□□□□ -0.55
PABPC1-221ENST00000522720 NMBP08949 121 aa11.63□□□□□ -0.55
PABPC1-221ENST00000522720 CDC34P49427 236 aaPredicted RBP11.63□□□□□ -0.55
PABPC1-221ENST00000522720 RXFP4Q8TDU9 374 aa11.63□□□□□ -0.55
PABPC1-221ENST00000522720 TMED6Q8WW62 240 aa11.63□□□□□ -0.55
PABPC1-221ENST00000522720 FAM210BQ96KR6 192 aa11.63□□□□□ -0.55
PABPC1-221ENST00000522720 SH3BGRL3Q9H299 93 aa11.63□□□□□ -0.55
PABPC1-221ENST00000522720 OTORQ9NRC9 128 aa11.63□□□□□ -0.55
PABPC1-221ENST00000522720 ZNF492Q9P255 531 aa11.63□□□□□ -0.55
PABPC1-221ENST00000522720 TIMM8BQ9Y5J9 83 aaPredicted RBP11.63□□□□□ -0.55
PABPC1-221ENST00000522720 VPS13DQ5THJ4 4388 aa11.62□□□□□ -0.55
PABPC1-221ENST00000522720 ZNF324O75467 553 aaPredicted RBP11.62□□□□□ -0.55
PABPC1-221ENST00000522720 STAG3L2P0CL84 134 aa11.62□□□□□ -0.55
PABPC1-221ENST00000522720 STAG3L3P0CL85 134 aa11.62□□□□□ -0.55
PABPC1-221ENST00000522720 ZNF138P52744 262 aa11.62□□□□□ -0.55
PABPC1-221ENST00000522720 CCDC28AQ8IWP9 274 aa11.62□□□□□ -0.55
PABPC1-221ENST00000522720 ZFAND2AQ8N6M9 145 aa11.62□□□□□ -0.55
PABPC1-221ENST00000522720 ZNF680Q8NEM1 530 aa11.62□□□□□ -0.55
PABPC1-221ENST00000522720 RAB24Q969Q5 203 aa11.62□□□□□ -0.55
PABPC1-221ENST00000522720 PYGO2Q9BRQ0 406 aa11.62□□□□□ -0.55
PABPC1-221ENST00000522720 TRBV7-9A0A0J9YWB2 115 aa11.61□□□□□ -0.55
PABPC1-221ENST00000522720 PGPA6NDG6 321 aa11.61□□□□□ -0.55
PABPC1-221ENST00000522720 DIRC3C9JPN6 131 aa11.61□□□□□ -0.55
PABPC1-221ENST00000522720 GPX1P07203 203 aa11.61□□□□□ -0.55
PABPC1-221ENST00000522720 ARL14EPLP0DKL9 152 aa11.61□□□□□ -0.55
PABPC1-221ENST00000522720 DEFB130BP0DP73 79 aa11.61□□□□□ -0.55
PABPC1-221ENST00000522720 DEFB130AP0DP74 79 aa11.61□□□□□ -0.55
PABPC1-221ENST00000522720 SULT1A2P50226 295 aa11.61□□□□□ -0.55
PABPC1-221ENST00000522720 NDUFAF3Q9BU61 184 aa11.61□□□□□ -0.55
PABPC1-221ENST00000522720 ACTR3CQ9C0K3 210 aaPredicted RBP11.61□□□□□ -0.55
PABPC1-221ENST00000522720 TEX46H3BTG2 121 aa11.6□□□□□ -0.55
PABPC1-221ENST00000522720 HTN3P15516 51 aa11.6□□□□□ -0.55
PABPC1-221ENST00000522720 RNASE4P34096 147 aaKnown RBP11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 93.2 ms