RNA–Protein interactions for RNA: ENST00000515289.2

NPHP3-211, Transcript of nephrocystin 3, humanhuman

TSL 3

Gene NPHP3, Length 556 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-211ENST00000515289 LY6LH3BQJ8 138 aa4.68□□□□□ -1.66
NPHP3-211ENST00000515289 HRASP01112 189 aa4.68□□□□□ -1.66
NPHP3-211ENST00000515289 APOA2P02652 100 aa4.68□□□□□ -1.66
NPHP3-211ENST00000515289 SAA1P0DJI8 122 aaPredicted RBP4.68□□□□□ -1.66
NPHP3-211ENST00000515289 M6PRP20645 277 aa4.68□□□□□ -1.66
NPHP3-211ENST00000515289 SNCAP37840 140 aa4.68□□□□□ -1.66
NPHP3-211ENST00000515289 REG1BP48304 166 aa4.68□□□□□ -1.66
NPHP3-211ENST00000515289 UBE2AP49459 152 aa4.68□□□□□ -1.66
NPHP3-211ENST00000515289 HSPE1P61604 102 aaKnown RBP4.68□□□□□ -1.66
NPHP3-211ENST00000515289 ARF6P62330 175 aa4.68□□□□□ -1.66
NPHP3-211ENST00000515289 RTL8BQ17RB0 113 aa4.68□□□□□ -1.66
NPHP3-211ENST00000515289 MRGPRG-AS1Q2M3A8 158 aa4.68□□□□□ -1.66
NPHP3-211ENST00000515289 LDLRAD2Q5SZI1 272 aa4.68□□□□□ -1.66
NPHP3-211ENST00000515289 HCP5Q6MZN7 132 aa4.68□□□□□ -1.66
NPHP3-211ENST00000515289 DPPA3Q6W0C5 159 aa4.68□□□□□ -1.66
NPHP3-211ENST00000515289 SPNS3Q6ZMD2 512 aa4.68□□□□□ -1.66
NPHP3-211ENST00000515289 PDPNQ86YL7 162 aa4.68□□□□□ -1.66
NPHP3-211ENST00000515289 ZFP82Q8N141 532 aa4.68□□□□□ -1.66
NPHP3-211ENST00000515289 FAM213BQ8TBF2 198 aa4.68□□□□□ -1.66
NPHP3-211ENST00000515289 SRSF12Q8WXF0 261 aaKnown RBP4.68□□□□□ -1.66
NPHP3-211ENST00000515289 BET1LQ9NYM9 111 aa4.68□□□□□ -1.66
NPHP3-211ENST00000515289 PRNDQ9UKY0 176 aa4.68□□□□□ -1.66
NPHP3-211ENST00000515289 CARHSP1Q9Y2V2 147 aaKnown RBP4.68□□□□□ -1.66
NPHP3-211ENST00000515289 TIMM9Q9Y5J7 89 aa4.68□□□□□ -1.66
NPHP3-211ENST00000515289 MALRD1Q5VYJ5 2156 aa4.68□□□□□ -1.66
NPHP3-211ENST00000515289 IGLV11-55A0A075B6I3 123 aa4.67□□□□□ -1.66
NPHP3-211ENST00000515289 TRAV1-1A0A0B4J248 108 aa4.67□□□□□ -1.66
NPHP3-211ENST00000515289 A0A1B0GW64 132 aa4.67□□□□□ -1.66
NPHP3-211ENST00000515289 PGPA6NDG6 321 aa4.67□□□□□ -1.66
NPHP3-211ENST00000515289 IFNA17P01571 189 aa4.67□□□□□ -1.66
NPHP3-211ENST00000515289 IGKV1D-33P01593 117 aa4.67□□□□□ -1.66
NPHP3-211ENST00000515289 IGKV1-33P01594 117 aa4.67□□□□□ -1.66
NPHP3-211ENST00000515289 CCL20P78556 96 aa4.67□□□□□ -1.66
NPHP3-211ENST00000515289 PRCDQ00LT1 54 aa4.67□□□□□ -1.66
NPHP3-211ENST00000515289 PRB3Q04118 309 aaPredicted RBP4.67□□□□□ -1.66
NPHP3-211ENST00000515289 AKR1C1Q04828 323 aa4.67□□□□□ -1.66
NPHP3-211ENST00000515289 ZNF616Q08AN1 781 aa4.67□□□□□ -1.66
NPHP3-211ENST00000515289 MAPK1IP1LQ8NDC0 245 aa4.67□□□□□ -1.66
NPHP3-211ENST00000515289 OR10P1Q8NGE3 313 aa4.67□□□□□ -1.66
NPHP3-211ENST00000515289 OR4C13Q8NGP0 309 aa4.67□□□□□ -1.66
NPHP3-211ENST00000515289 OR10X1Q8NGY0 326 aa4.67□□□□□ -1.66
NPHP3-211ENST00000515289 TMEM167AQ8TBQ9 72 aa4.67□□□□□ -1.66
NPHP3-211ENST00000515289 C18orf15Q96N68 181 aa4.67□□□□□ -1.66
NPHP3-211ENST00000515289 VSIRQ9H7M9 311 aa4.67□□□□□ -1.66
NPHP3-211ENST00000515289 RPRMQ9NS64 109 aa4.67□□□□□ -1.66
NPHP3-211ENST00000515289 UQCC1Q9NVA1 299 aa4.67□□□□□ -1.66
NPHP3-211ENST00000515289 PRELID1Q9Y255 219 aa4.67□□□□□ -1.66
NPHP3-211ENST00000515289 WASHC3Q9Y3C0 194 aa4.67□□□□□ -1.66
NPHP3-211ENST00000515289 INSIG2Q9Y5U4 225 aa4.67□□□□□ -1.66
NPHP3-211ENST00000515289 USP24Q9UPU5 2620 aa4.66□□□□□ -1.66
NPHP3-211ENST00000515289 TEX50A0A1B0GTY4 177 aa4.66□□□□□ -1.66
NPHP3-211ENST00000515289 LOC389332A0A1B0GUA5 103 aa4.66□□□□□ -1.66
NPHP3-211ENST00000515289 ODF3BA8MYP8 253 aa4.66□□□□□ -1.66
NPHP3-211ENST00000515289 BUB1B-PAK6H3BSN5 160 aa4.66□□□□□ -1.66
NPHP3-211ENST00000515289 M0R1W7 72 aa4.66□□□□□ -1.66
NPHP3-211ENST00000515289 CA2P00918 260 aa4.66□□□□□ -1.66
NPHP3-211ENST00000515289 PRH1P02810 166 aa4.66□□□□□ -1.66
NPHP3-211ENST00000515289 PRB1P04280 392 aa4.66□□□□□ -1.66
NPHP3-211ENST00000515289 HIST1H1EP10412 219 aaKnown RBP4.66□□□□□ -1.66
NPHP3-211ENST00000515289 FGF7P21781 194 aa4.66□□□□□ -1.66
NPHP3-211ENST00000515289 NPY1RP25929 384 aa4.66□□□□□ -1.66
NPHP3-211ENST00000515289 IL3RAP26951 378 aa4.66□□□□□ -1.66
NPHP3-211ENST00000515289 RAB13P51153 203 aa4.66□□□□□ -1.66
NPHP3-211ENST00000515289 EFNA4P52798 201 aa4.66□□□□□ -1.66
NPHP3-211ENST00000515289 RAB2AP61019 212 aa4.66□□□□□ -1.66
NPHP3-211ENST00000515289 SERF2P84101 59 aa4.66□□□□□ -1.66
NPHP3-211ENST00000515289 SMAGPQ0VAQ4 97 aa4.66□□□□□ -1.66
NPHP3-211ENST00000515289 GUK1Q16774 197 aa4.66□□□□□ -1.66
NPHP3-211ENST00000515289 TCTEX1D4Q5JR98 221 aa4.66□□□□□ -1.66
NPHP3-211ENST00000515289 AKR1C8PQ5T2L2 129 aa4.66□□□□□ -1.66
NPHP3-211ENST00000515289 OR11H6Q8NGC7 330 aa4.66□□□□□ -1.66
NPHP3-211ENST00000515289 OR4A5Q8NH83 315 aa4.66□□□□□ -1.66
NPHP3-211ENST00000515289 SCGB1C1Q8TD33 95 aa4.66□□□□□ -1.66
NPHP3-211ENST00000515289 MBD3L1Q8WWY6 194 aa4.66□□□□□ -1.66
NPHP3-211ENST00000515289 GGACTQ9BVM4 153 aa4.66□□□□□ -1.66
NPHP3-211ENST00000515289 KRTAP4-5Q9BYR2 181 aa4.66□□□□□ -1.66
NPHP3-211ENST00000515289 RPP21Q9H633 154 aaKnown RBP4.66□□□□□ -1.66
NPHP3-211ENST00000515289 NDUFA4L2Q9NRX3 87 aa4.66□□□□□ -1.66
NPHP3-211ENST00000515289 SPTBN1Q01082 2364 aaKnown RBP4.65□□□□□ -1.66
NPHP3-211ENST00000515289 IGHV3-72A0A0B4J1Y9 119 aa4.65□□□□□ -1.67
NPHP3-211ENST00000515289 IGHV1-3A0A0C4DH29 117 aa4.65□□□□□ -1.67
NPHP3-211ENST00000515289 E7EUB6 86 aa4.65□□□□□ -1.67
NPHP3-211ENST00000515289 FNDC10F2Z333 226 aa4.65□□□□□ -1.67
NPHP3-211ENST00000515289 IFNA10P01566 189 aa4.65□□□□□ -1.67
NPHP3-211ENST00000515289 IGLV2-8P01709 118 aa4.65□□□□□ -1.67
NPHP3-211ENST00000515289 APOC3P02656 99 aa4.65□□□□□ -1.67
NPHP3-211ENST00000515289 SFTA3P0C7M3 94 aa4.65□□□□□ -1.67
NPHP3-211ENST00000515289 RNASE2P10153 161 aaKnown RBP4.65□□□□□ -1.67
NPHP3-211ENST00000515289 PRTN3P24158 256 aa4.65□□□□□ -1.67
NPHP3-211ENST00000515289 KLRD1Q13241 179 aa4.65□□□□□ -1.67
NPHP3-211ENST00000515289 C10orf55Q5SWW7 151 aa4.65□□□□□ -1.67
NPHP3-211ENST00000515289 RPP25LQ8N5L8 163 aaKnown RBP4.65□□□□□ -1.67
NPHP3-211ENST00000515289 OR1L8Q8NGR8 309 aa4.65□□□□□ -1.67
NPHP3-211ENST00000515289 NARS2Q96I59 477 aaKnown RBP4.65□□□□□ -1.67
NPHP3-211ENST00000515289 MGST2Q99735 147 aa4.65□□□□□ -1.67
NPHP3-211ENST00000515289 GGTLC1Q9BX51 225 aa4.65□□□□□ -1.67
NPHP3-211ENST00000515289 SEC11CQ9BY50 192 aa4.65□□□□□ -1.67
NPHP3-211ENST00000515289 NPCDR1Q9BY65 106 aa4.65□□□□□ -1.67
NPHP3-211ENST00000515289 AMMECR1Q9Y4X0 333 aaPredicted RBP4.65□□□□□ -1.67
NPHP3-211ENST00000515289 RELNP78509 3460 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms