RNA–Protein interactions for RNA: ENST00000512789.5

GYPA-209, Transcript of glycophorin A (MNS blood group), humanhuman

TSL 1 (best) BASIC

Gene GYPA, Length 258 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPA-209ENST00000512789 AP3S2P59780 193 aa0.71□□□□□ -2.3
GYPA-209ENST00000512789 PTRHD1Q6GMV3 140 aaKnown RBP0.71□□□□□ -2.3
GYPA-209ENST00000512789 SOSTDC1Q6X4U4 206 aa0.71□□□□□ -2.3
GYPA-209ENST00000512789 OR13D1Q8NGV5 346 aa0.71□□□□□ -2.3
GYPA-209ENST00000512789 AMELYQ99218 206 aa0.71□□□□□ -2.3
GYPA-209ENST00000512789 DCSTAMPQ9H295 470 aa0.71□□□□□ -2.3
GYPA-209ENST00000512789 PKIGQ9Y2B9 76 aa0.71□□□□□ -2.3
GYPA-209ENST00000512789 SONP18583 2426 aaKnown RBP0.71□□□□□ -2.3
GYPA-209ENST00000512789 PKHD1L1Q86WI1 4243 aa0.71□□□□□ -2.3
GYPA-209ENST00000512789 MRC1P22897 1456 aa0.71□□□□□ -2.3
GYPA-209ENST00000512789 GCC2Q8IWJ2 1684 aa0.71□□□□□ -2.3
GYPA-209ENST00000512789 KIAA1107Q9UPP5 1409 aa0.71□□□□□ -2.3
GYPA-209ENST00000512789 URB1O60287 2271 aaKnown RBP0.71□□□□□ -2.3
GYPA-209ENST00000512789 STAB2Q8WWQ8 2551 aa0.7□□□□□ -2.3
GYPA-209ENST00000512789 MYO3BQ8WXR4 1341 aa0.7□□□□□ -2.3
GYPA-209ENST00000512789 VPS13DQ5THJ4 4388 aa0.7□□□□□ -2.3
GYPA-209ENST00000512789 DDX60LQ5H9U9 1706 aaKnown RBP0.7□□□□□ -2.3
GYPA-209ENST00000512789 A0A087X0T9 212 aa0.7□□□□□ -2.3
GYPA-209ENST00000512789 TRAV26-2A0A0B4J265 109 aa0.7□□□□□ -2.3
GYPA-209ENST00000512789 CLDN24A6NM45 220 aa0.7□□□□□ -2.3
GYPA-209ENST00000512789 LYZL6O75951 148 aa0.7□□□□□ -2.3
GYPA-209ENST00000512789 RHOBP62745 196 aa0.7□□□□□ -2.3
GYPA-209ENST00000512789 IMPG1Q17R60 797 aa0.7□□□□□ -2.3
GYPA-209ENST00000512789 FAM74A1Q5RGS3 127 aa0.7□□□□□ -2.3
GYPA-209ENST00000512789 TEX261Q6UWH6 196 aa0.7□□□□□ -2.3
GYPA-209ENST00000512789 CLDN22Q8N7P3 220 aa0.7□□□□□ -2.3
GYPA-209ENST00000512789 LINC00301Q8NCQ3 95 aa0.7□□□□□ -2.3
GYPA-209ENST00000512789 CT55Q8WUE5 264 aa0.7□□□□□ -2.3
GYPA-209ENST00000512789 C8orf76Q96K31 380 aa0.7□□□□□ -2.3
GYPA-209ENST00000512789 C2orf50Q96LR7 162 aa0.7□□□□□ -2.3
GYPA-209ENST00000512789 CCDC42Q96M95 316 aa0.7□□□□□ -2.3
GYPA-209ENST00000512789 HIST1H2BLQ99880 126 aa0.7□□□□□ -2.3
GYPA-209ENST00000512789 C14orf132Q9NPU4 83 aa0.7□□□□□ -2.3
GYPA-209ENST00000512789 MRPL27Q9P0M9 148 aaKnown RBP0.7□□□□□ -2.3
GYPA-209ENST00000512789 NOSIPQ9Y314 301 aaKnown RBP0.7□□□□□ -2.3
GYPA-209ENST00000512789 U3KQ87 197 aa0.7□□□□□ -2.3
GYPA-209ENST00000512789 APOBP04114 4563 aaKnown RBP0.7□□□□□ -2.3
GYPA-209ENST00000512789 TNRC6BQ9UPQ9 1833 aaKnown RBP0.7□□□□□ -2.3
GYPA-209ENST00000512789 ARHGAP31Q2M1Z3 1444 aa0.7□□□□□ -2.3
GYPA-209ENST00000512789 CEP162Q5TB80 1403 aa0.7□□□□□ -2.3
GYPA-209ENST00000512789 VPS13BQ7Z7G8 4022 aa0.7□□□□□ -2.3
GYPA-209ENST00000512789 CNTRLQ7Z7A1 2325 aa0.7□□□□□ -2.3
GYPA-209ENST00000512789 DNAH17Q9UFH2 4485 aa0.7□□□□□ -2.3
GYPA-209ENST00000512789 MUC12Q9UKN1 5478 aa0.69□□□□□ -2.3
GYPA-209ENST00000512789 ABCC6O95255 1503 aa0.69□□□□□ -2.3
GYPA-209ENST00000512789 E9PCH4 1651 aa0.69□□□□□ -2.3
GYPA-209ENST00000512789 ZNF831Q5JPB2 1677 aa0.69□□□□□ -2.3
GYPA-209ENST00000512789 DNAH5Q8TE73 4624 aa0.69□□□□□ -2.3
GYPA-209ENST00000512789 KIF1BO60333 1816 aa0.69□□□□□ -2.3
GYPA-209ENST00000512789 A0A1W2PPM0 123 aa0.69□□□□□ -2.3
GYPA-209ENST00000512789 CCDC160A6NGH7 325 aa0.69□□□□□ -2.3
GYPA-209ENST00000512789 ZNF736B4DX44 427 aaPredicted RBP0.69□□□□□ -2.3
GYPA-209ENST00000512789 PPIBP23284 216 aaKnown RBP0.69□□□□□ -2.3
GYPA-209ENST00000512789 RPS20P60866 119 aaKnown RBP0.69□□□□□ -2.3
GYPA-209ENST00000512789 C1orf137Q5JT78 98 aa0.69□□□□□ -2.3
GYPA-209ENST00000512789 TRAPPC5Q8IUR0 188 aa0.69□□□□□ -2.3
GYPA-209ENST00000512789 C3orf56Q8N813 242 aa0.69□□□□□ -2.3
GYPA-209ENST00000512789 GDPD1Q8N9F7 314 aa0.69□□□□□ -2.3
GYPA-209ENST00000512789 OR2T10Q8NGZ9 312 aa0.69□□□□□ -2.3
GYPA-209ENST00000512789 FAM172AQ8WUF8 416 aa0.69□□□□□ -2.3
GYPA-209ENST00000512789 PATE1Q8WXA2 126 aa0.69□□□□□ -2.3
GYPA-209ENST00000512789 TRIM4Q9C037 500 aa0.69□□□□□ -2.3
GYPA-209ENST00000512789 OR51V1Q9H2C8 321 aa0.69□□□□□ -2.3
GYPA-209ENST00000512789 CDC42SE1Q9NRR8 79 aa0.69□□□□□ -2.3
GYPA-209ENST00000512789 MACF1Q9UPN3 7388 aaKnown RBP0.69□□□□□ -2.3
GYPA-209ENST00000512789 SRRM2Q9UQ35 2752 aaKnown RBP0.69□□□□□ -2.3
GYPA-209ENST00000512789 DMBT1Q9UGM3 2413 aaPredicted RBP0.69□□□□□ -2.3
GYPA-209ENST00000512789 NCOA6Q14686 2063 aaPredicted RBP0.69□□□□□ -2.3
GYPA-209ENST00000512789 SPAG17Q6Q759 2223 aa0.69□□□□□ -2.3
GYPA-209ENST00000512789 LRRC37AA6NMS7 1700 aa0.69□□□□□ -2.3
GYPA-209ENST00000512789 LRP2P98164 4655 aa0.69□□□□□ -2.3
GYPA-209ENST00000512789 FAT3Q8TDW7 4589 aa0.69□□□□□ -2.3
GYPA-209ENST00000512789 LRP1Q07954 4544 aaKnown RBP0.68□□□□□ -2.3
GYPA-209ENST00000512789 DNAH11Q96DT5 4516 aa0.68□□□□□ -2.3
GYPA-209ENST00000512789 PPLO60437 1756 aa0.68□□□□□ -2.3
GYPA-209ENST00000512789 NCR3O14931 201 aa0.68□□□□□ -2.3
GYPA-209ENST00000512789 OR2J2O76002 312 aa0.68□□□□□ -2.3
GYPA-209ENST00000512789 RPP14O95059 124 aaKnown RBP0.68□□□□□ -2.3
GYPA-209ENST00000512789 TSNQ15631 228 aaKnown RBP0.68□□□□□ -2.3
GYPA-209ENST00000512789 ESRGQ1W209 222 aa0.68□□□□□ -2.3
GYPA-209ENST00000512789 LINC01554Q52M75 96 aa0.68□□□□□ -2.3
GYPA-209ENST00000512789 BRMS1LQ5PSV4 323 aa0.68□□□□□ -2.3
GYPA-209ENST00000512789 DDX60Q8IY21 1712 aaKnown RBP0.68□□□□□ -2.3
GYPA-209ENST00000512789 ARL5BQ96KC2 179 aa0.68□□□□□ -2.3
GYPA-209ENST00000512789 V9GYY5 206 aaPredicted RBP0.68□□□□□ -2.3
GYPA-209ENST00000512789 PKDREJQ9NTG1 2253 aa0.68□□□□□ -2.3
GYPA-209ENST00000512789 RTL1A6NKG5 1358 aa0.68□□□□□ -2.3
GYPA-209ENST00000512789 ARFGEF2Q9Y6D5 1785 aa0.68□□□□□ -2.3
GYPA-209ENST00000512789 IQGAP3Q86VI3 1631 aa0.67□□□□□ -2.3
GYPA-209ENST00000512789 MUC4Q99102 2169 aa0.67□□□□□ -2.3
GYPA-209ENST00000512789 USH2AO75445 5202 aa0.67□□□□□ -2.3
GYPA-209ENST00000512789 PLXNB2O15031 1838 aa0.67□□□□□ -2.3
GYPA-209ENST00000512789 TSC2P49815 1807 aa0.67□□□□□ -2.3
GYPA-209ENST00000512789 IAH1Q2TAA2 248 aaPredicted RBP0.67□□□□□ -2.3
GYPA-209ENST00000512789 LYRM7Q5U5X0 104 aa0.67□□□□□ -2.3
GYPA-209ENST00000512789 OR8D4Q8NGM9 314 aa0.67□□□□□ -2.3
GYPA-209ENST00000512789 TMEM254Q8TBM7 123 aa0.67□□□□□ -2.3
GYPA-209ENST00000512789 LINC00467Q9BRT7 94 aa0.67□□□□□ -2.3
GYPA-209ENST00000512789 FAM208AQ9UK61 1670 aaKnown RBP0.67□□□□□ -2.3
GYPA-209ENST00000512789 MGAMO43451 1857 aa0.67□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms