RNA–Protein interactions for RNA: ENST00000508736.1

PRPF40B-203, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 1,861 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-203ENST00000508736 TMEM70Q9BUB7 260 aa8.96□□□□□ -0.98
PRPF40B-203ENST00000508736 SETXQ7Z333 2677 aaKnown RBP8.96□□□□□ -0.98
PRPF40B-203ENST00000508736 PRRC2AP48634 2157 aaKnown RBP8.95□□□□□ -0.98
PRPF40B-203ENST00000508736 A0A087X0K7 114 aa8.95□□□□□ -0.98
PRPF40B-203ENST00000508736 ZNF785A8K8V0 405 aa8.95□□□□□ -0.98
PRPF40B-203ENST00000508736 SH2D1AO60880 128 aa8.95□□□□□ -0.98
PRPF40B-203ENST00000508736 IGF1P05019 195 aa8.95□□□□□ -0.98
PRPF40B-203ENST00000508736 LINC00614P0C842 121 aa8.95□□□□□ -0.98
PRPF40B-203ENST00000508736 BMI1P35226 326 aa8.95□□□□□ -0.98
PRPF40B-203ENST00000508736 RELQ04864 619 aaPredicted RBP8.95□□□□□ -0.98
PRPF40B-203ENST00000508736 PRSS57Q6UWY2 283 aa8.95□□□□□ -0.98
PRPF40B-203ENST00000508736 EEF1AKMT3Q96AZ1 226 aa8.95□□□□□ -0.98
PRPF40B-203ENST00000508736 Q96MF0 132 aa8.95□□□□□ -0.98
PRPF40B-203ENST00000508736 IGKV2-40A0A087WW87 121 aaPredicted RBP8.94□□□□□ -0.98
PRPF40B-203ENST00000508736 TRBV7-1A0A0A6YYK4 115 aa8.94□□□□□ -0.98
PRPF40B-203ENST00000508736 IGHV1-24A0A0C4DH33 117 aa8.94□□□□□ -0.98
PRPF40B-203ENST00000508736 C2orf70A6NJV1 201 aa8.94□□□□□ -0.98
PRPF40B-203ENST00000508736 IGKV2D-40P01614 121 aaPredicted RBP8.94□□□□□ -0.98
PRPF40B-203ENST00000508736 RPLP1P05386 114 aaKnown RBP8.94□□□□□ -0.98
PRPF40B-203ENST00000508736 CRIP1P50238 77 aa8.94□□□□□ -0.98
PRPF40B-203ENST00000508736 EBLN2Q6P2I7 272 aa8.94□□□□□ -0.98
PRPF40B-203ENST00000508736 Q71RC1 249 aaPredicted RBP8.94□□□□□ -0.98
PRPF40B-203ENST00000508736 TMEM219Q86XT9 240 aa8.94□□□□□ -0.98
PRPF40B-203ENST00000508736 KRTAP1-3Q8IUG1 177 aa8.94□□□□□ -0.98
PRPF40B-203ENST00000508736 URB1-AS1Q96HZ7 61 aa8.94□□□□□ -0.98
PRPF40B-203ENST00000508736 PRR25Q96S07 402 aa8.94□□□□□ -0.98
PRPF40B-203ENST00000508736 TPPP3Q9BW30 176 aa8.94□□□□□ -0.98
PRPF40B-203ENST00000508736 TRAV9-2A0A087WT02 112 aa8.94□□□□□ -0.98
PRPF40B-203ENST00000508736 TRAV41A0A0B4J266 112 aa8.94□□□□□ -0.98
PRPF40B-203ENST00000508736 LINC01548A6NM66 108 aa8.94□□□□□ -0.98
PRPF40B-203ENST00000508736 G3V318 75 aa8.94□□□□□ -0.98
PRPF40B-203ENST00000508736 H3BUX3 64 aa8.94□□□□□ -0.98
PRPF40B-203ENST00000508736 LEPROTL1O95214 131 aa8.94□□□□□ -0.98
PRPF40B-203ENST00000508736 AVPP01185 164 aa8.94□□□□□ -0.98
PRPF40B-203ENST00000508736 IGHG2P01859 326 aa8.94□□□□□ -0.98
PRPF40B-203ENST00000508736 IGLC3P0DOY3 106 aa8.94□□□□□ -0.98
PRPF40B-203ENST00000508736 ZNF493Q6ZR52 646 aa8.94□□□□□ -0.98
PRPF40B-203ENST00000508736 WFDC11Q8NEX6 87 aa8.94□□□□□ -0.98
PRPF40B-203ENST00000508736 SLC50A1Q9BRV3 221 aa8.94□□□□□ -0.98
PRPF40B-203ENST00000508736 ZFAND3Q9H8U3 227 aa8.94□□□□□ -0.98
PRPF40B-203ENST00000508736 HSPB8Q9UJY1 196 aa8.94□□□□□ -0.98
PRPF40B-203ENST00000508736 ZNF580Q9UK33 172 aa8.94□□□□□ -0.98
PRPF40B-203ENST00000508736 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.93□□□□□ -0.98
PRPF40B-203ENST00000508736 FAM223BA6NKX1 122 aa8.93□□□□□ -0.98
PRPF40B-203ENST00000508736 RNF223E7ERA6 249 aa8.93□□□□□ -0.98
PRPF40B-203ENST00000508736 H3BUA1 57 aa8.93□□□□□ -0.98
PRPF40B-203ENST00000508736 CLEC3BP05452 202 aa8.93□□□□□ -0.98
PRPF40B-203ENST00000508736 HNRNPA3P51991 378 aaKnown RBP8.93□□□□□ -0.98
PRPF40B-203ENST00000508736 SRSF2Q01130 221 aaKnown RBP8.93□□□□□ -0.98
PRPF40B-203ENST00000508736 LCN12Q6JVE5 192 aa8.93□□□□□ -0.98
PRPF40B-203ENST00000508736 FAM223AQ8IWN6 122 aa8.93□□□□□ -0.98
PRPF40B-203ENST00000508736 ASCL2Q99929 193 aa8.93□□□□□ -0.98
PRPF40B-203ENST00000508736 SMAD5-AS1Q9Y6J3 95 aa8.93□□□□□ -0.98
PRPF40B-203ENST00000508736 M0QZ24 198 aa8.92□□□□□ -0.98
PRPF40B-203ENST00000508736 TCAPO15273 167 aa8.92□□□□□ -0.98
PRPF40B-203ENST00000508736 CRXO43186 299 aaPredicted RBP8.92□□□□□ -0.98
PRPF40B-203ENST00000508736 PRR31Q5SQ13 230 aa8.92□□□□□ -0.98
PRPF40B-203ENST00000508736 Q6ZN92 141 aa8.92□□□□□ -0.98
PRPF40B-203ENST00000508736 MAPK1IP1LQ8NDC0 245 aa8.92□□□□□ -0.98
PRPF40B-203ENST00000508736 METTL26Q96S19 204 aa8.92□□□□□ -0.98
PRPF40B-203ENST00000508736 MAP1LC3CQ9BXW4 147 aa8.92□□□□□ -0.98
PRPF40B-203ENST00000508736 CLEC5AQ9NY25 188 aa8.92□□□□□ -0.98
PRPF40B-203ENST00000508736 RBAKDNA6NC62 111 aa8.91□□□□□ -0.98
PRPF40B-203ENST00000508736 BUB3O43684 328 aa8.91□□□□□ -0.98
PRPF40B-203ENST00000508736 LYZL1Q6UWQ5 148 aa8.91□□□□□ -0.98
PRPF40B-203ENST00000508736 CLEC19AQ6UXS0 136 aa8.91□□□□□ -0.98
PRPF40B-203ENST00000508736 FA2HQ7L5A8 372 aa8.91□□□□□ -0.98
PRPF40B-203ENST00000508736 ATOH7Q8N100 152 aa8.91□□□□□ -0.98
PRPF40B-203ENST00000508736 CCDC140Q96MF4 163 aa8.91□□□□□ -0.98
PRPF40B-203ENST00000508736 TMEM191AQ9H0A3 160 aa8.91□□□□□ -0.98
PRPF40B-203ENST00000508736 AP5S1Q9NUS5 200 aa8.91□□□□□ -0.98
PRPF40B-203ENST00000508736 IGHV3-35A0A0C4DH35 117 aa8.91□□□□□ -0.98
PRPF40B-203ENST00000508736 SYS1-DBNDD2H3BUS1 97 aa8.91□□□□□ -0.98
PRPF40B-203ENST00000508736 ATP5G2Q06055 141 aa8.91□□□□□ -0.98
PRPF40B-203ENST00000508736 TMSB15BA0A087X1C1 80 aa8.9□□□□□ -0.98
PRPF40B-203ENST00000508736 TGFAP01135 160 aa8.9□□□□□ -0.98
PRPF40B-203ENST00000508736 FSHBP01225 129 aa8.9□□□□□ -0.98
PRPF40B-203ENST00000508736 PPIFP30405 207 aaKnown RBP8.9□□□□□ -0.98
PRPF40B-203ENST00000508736 PET117Q6UWS5 81 aa8.9□□□□□ -0.98
PRPF40B-203ENST00000508736 C9orf139Q6ZV77 190 aa8.9□□□□□ -0.98
PRPF40B-203ENST00000508736 FER1L6-AS1Q8NA97 138 aa8.9□□□□□ -0.98
PRPF40B-203ENST00000508736 PRSS3P2Q8NHM4 247 aa8.9□□□□□ -0.98
PRPF40B-203ENST00000508736 Q8TAT8 98 aa8.9□□□□□ -0.98
PRPF40B-203ENST00000508736 VGLL1Q99990 258 aa8.9□□□□□ -0.98
PRPF40B-203ENST00000508736 IGHV3OR16-8A0A075B7F1 116 aa8.89□□□□□ -0.99
PRPF40B-203ENST00000508736 OR4C46A6NHA9 309 aa8.89□□□□□ -0.99
PRPF40B-203ENST00000508736 CYSRT1A8MQ03 144 aa8.89□□□□□ -0.99
PRPF40B-203ENST00000508736 HSBP1L1C9JCN9 74 aa8.89□□□□□ -0.99
PRPF40B-203ENST00000508736 CSN3P07498 182 aa8.89□□□□□ -0.99
PRPF40B-203ENST00000508736 IGHV4-31P0DP07 118 aa8.89□□□□□ -0.99
PRPF40B-203ENST00000508736 PRB4P10163 310 aaPredicted RBP8.89□□□□□ -0.99
PRPF40B-203ENST00000508736 BATFQ16520 125 aa8.89□□□□□ -0.99
PRPF40B-203ENST00000508736 LY6EQ16553 131 aa8.89□□□□□ -0.99
PRPF40B-203ENST00000508736 COL5A1-AS1Q5SY13 56 aa8.89□□□□□ -0.99
PRPF40B-203ENST00000508736 FAM104BQ5XKR9 115 aa8.89□□□□□ -0.99
PRPF40B-203ENST00000508736 OR10AG1Q8NH19 301 aa8.89□□□□□ -0.99
PRPF40B-203ENST00000508736 MRPL53Q96EL3 112 aaKnown RBP8.89□□□□□ -0.99
PRPF40B-203ENST00000508736 MYO9AB2RTY4 2548 aa8.89□□□□□ -0.99
PRPF40B-203ENST00000508736 TEX15Q9BXT5 2789 aa8.89□□□□□ -0.99
PRPF40B-203ENST00000508736 FABP5P3A8MUU1 101 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms