RNA–Protein interactions for RNA: ENST00000502971.5

PTPN13-205, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

TSL 1 (best) BASIC

Gene PTPN13, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-205ENST00000502971 F8P00451 2351 aa16.72■□□□□ 0.27
PTPN13-205ENST00000502971 IGHV4OR15-8A0A075B7B6 117 aa16.72■□□□□ 0.27
PTPN13-205ENST00000502971 A0A087WW49 117 aa16.72■□□□□ 0.27
PTPN13-205ENST00000502971 A8MWP6 167 aa16.72■□□□□ 0.27
PTPN13-205ENST00000502971 SOCS3O14543 225 aa16.72■□□□□ 0.27
PTPN13-205ENST00000502971 CDX1P47902 265 aaPredicted RBP16.72■□□□□ 0.27
PTPN13-205ENST00000502971 ASCL2Q99929 193 aa16.72■□□□□ 0.27
PTPN13-205ENST00000502971 HIGD1CA8MV81 97 aa16.71■□□□□ 0.27
PTPN13-205ENST00000502971 MT-ND6P03923 174 aa16.71■□□□□ 0.27
PTPN13-205ENST00000502971 RNASE1P07998 156 aaKnown RBP16.71■□□□□ 0.27
PTPN13-205ENST00000502971 CRIP1P50238 77 aa16.71■□□□□ 0.27
PTPN13-205ENST00000502971 SPINK4O60575 86 aa16.7■□□□□ 0.26
PTPN13-205ENST00000502971 HOXA5P20719 270 aa16.7■□□□□ 0.26
PTPN13-205ENST00000502971 CBLN1P23435 193 aa16.7■□□□□ 0.26
PTPN13-205ENST00000502971 OR2D3Q8NGH3 330 aa16.7■□□□□ 0.26
PTPN13-205ENST00000502971 WIPF2Q8TF74 440 aaPredicted RBP16.7■□□□□ 0.26
PTPN13-205ENST00000502971 TMEM213A2RRL7 107 aa16.7■□□□□ 0.26
PTPN13-205ENST00000502971 SNURFLB1AK76 121 aa16.7■□□□□ 0.26
PTPN13-205ENST00000502971 RPL11P62913 178 aaKnown RBP16.7■□□□□ 0.26
PTPN13-205ENST00000502971 FAM162BQ5T6X4 162 aa16.7■□□□□ 0.26
PTPN13-205ENST00000502971 SAMD13Q5VXD3 122 aa16.7■□□□□ 0.26
PTPN13-205ENST00000502971 ATP5L2Q7Z4Y8 100 aa16.7■□□□□ 0.26
PTPN13-205ENST00000502971 ZNF418Q8TF45 676 aaPredicted RBP16.7■□□□□ 0.26
PTPN13-205ENST00000502971 HOXD3P31249 432 aaPredicted RBP16.69■□□□□ 0.26
PTPN13-205ENST00000502971 ERCC8Q13216 396 aa16.69■□□□□ 0.26
PTPN13-205ENST00000502971 MRPL54Q6P161 138 aaKnown RBP16.69■□□□□ 0.26
PTPN13-205ENST00000502971 C9orf47Q6ZRZ4 202 aa16.69■□□□□ 0.26
PTPN13-205ENST00000502971 Q8TAT8 98 aa16.69■□□□□ 0.26
PTPN13-205ENST00000502971 C4orf3Q8WVX3 66 aa16.69■□□□□ 0.26
PTPN13-205ENST00000502971 MRPL18Q9H0U6 180 aaKnown RBP16.69■□□□□ 0.26
PTPN13-205ENST00000502971 PPP1R14DQ9NXH3 145 aa16.69■□□□□ 0.26
PTPN13-205ENST00000502971 SMUG1Q53HV7 270 aa16.68■□□□□ 0.26
PTPN13-205ENST00000502971 TMEM136Q6ZRR5 245 aa16.68■□□□□ 0.26
PTPN13-205ENST00000502971 TCF24Q7RTU0 167 aa16.68■□□□□ 0.26
PTPN13-205ENST00000502971 TEP1Q99973 2627 aaKnown RBP16.68■□□□□ 0.26
PTPN13-205ENST00000502971 MTORP42345 2549 aa16.68■□□□□ 0.26
PTPN13-205ENST00000502971 FRMD6-AS1P0C7T7 363 aa16.67■□□□□ 0.26
PTPN13-205ENST00000502971 FOXA3P55318 350 aaPredicted RBP16.67■□□□□ 0.26
PTPN13-205ENST00000502971 SYNJ2BPP57105 145 aa16.67■□□□□ 0.26
PTPN13-205ENST00000502971 TMEM78Q5T7P6 136 aa16.67■□□□□ 0.26
PTPN13-205ENST00000502971 RBPMS2Q6ZRY4 209 aaKnown RBP16.67■□□□□ 0.26
PTPN13-205ENST00000502971 GTSF1Q8WW33 167 aa16.67■□□□□ 0.26
PTPN13-205ENST00000502971 WFDC12Q8WWY7 111 aa16.67■□□□□ 0.26
PTPN13-205ENST00000502971 C20orf173Q96LM9 149 aa16.67■□□□□ 0.26
PTPN13-205ENST00000502971 AGPAT4-IT1Q9H0P7 198 aa16.67■□□□□ 0.26
PTPN13-205ENST00000502971 ANK3Q12955 4377 aaKnown RBP16.67■□□□□ 0.26
PTPN13-205ENST00000502971 INAFM1C9JVW0 142 aa16.67■□□□□ 0.26
PTPN13-205ENST00000502971 OVOL1O14753 267 aa16.67■□□□□ 0.26
PTPN13-205ENST00000502971 HLA-DQA1P01909 254 aa16.67■□□□□ 0.26
PTPN13-205ENST00000502971 ZNF138P52744 262 aa16.67■□□□□ 0.26
PTPN13-205ENST00000502971 KLF5Q13887 457 aaPredicted RBP16.67■□□□□ 0.26
PTPN13-205ENST00000502971 TCTEX1D4Q5JR98 221 aa16.67■□□□□ 0.26
PTPN13-205ENST00000502971 ZNF738Q8NE65 137 aa16.67■□□□□ 0.26
PTPN13-205ENST00000502971 C16orf95Q9H693 158 aa16.67■□□□□ 0.26
PTPN13-205ENST00000502971 SH2D1AO60880 128 aa16.66■□□□□ 0.26
PTPN13-205ENST00000502971 EDN2P20800 178 aa16.66■□□□□ 0.26
PTPN13-205ENST00000502971 HILS1P60008 231 aa16.66■□□□□ 0.26
PTPN13-205ENST00000502971 GPR61Q9BZJ8 451 aa16.66■□□□□ 0.26
PTPN13-205ENST00000502971 LINC01619G3V211 115 aa16.65■□□□□ 0.26
PTPN13-205ENST00000502971 AKR1D1P51857 326 aa16.65■□□□□ 0.26
PTPN13-205ENST00000502971 COA6Q5JTJ3 125 aaKnown RBP16.65■□□□□ 0.26
PTPN13-205ENST00000502971 NSD1Q96L73 2696 aaPredicted RBP16.65■□□□□ 0.26
PTPN13-205ENST00000502971 XKRY2A2RUG3 117 aa16.65■□□□□ 0.26
PTPN13-205ENST00000502971 RAB4BP61018 213 aa16.65■□□□□ 0.26
PTPN13-205ENST00000502971 C18orf65Q6ZTR6 163 aa16.65■□□□□ 0.26
PTPN13-205ENST00000502971 A0A1B0GXF2 115 aa16.64■□□□□ 0.25
PTPN13-205ENST00000502971 ID1P41134 155 aa16.64■□□□□ 0.25
PTPN13-205ENST00000502971 SRSF2Q01130 221 aaKnown RBP16.64■□□□□ 0.25
PTPN13-205ENST00000502971 PGLYRP4Q96LB8 373 aa16.64■□□□□ 0.25
PTPN13-205ENST00000502971 JMJD8Q96S16 334 aa16.64■□□□□ 0.25
PTPN13-205ENST00000502971 LENEPQ9Y5L5 61 aa16.64■□□□□ 0.25
PTPN13-205ENST00000502971 TMEM189A5PLL7 270 aa16.63■□□□□ 0.25
PTPN13-205ENST00000502971 CRLF1O75462 422 aa16.63■□□□□ 0.25
PTPN13-205ENST00000502971 Q6AWC8 147 aa16.63■□□□□ 0.25
PTPN13-205ENST00000502971 OR10J6PQ8NGY7 276 aa16.63■□□□□ 0.25
PTPN13-205ENST00000502971 DPF1Q92782 380 aa16.63■□□□□ 0.25
PTPN13-205ENST00000502971 LINC00477Q96M19 166 aa16.63■□□□□ 0.25
PTPN13-205ENST00000502971 C2orf70A6NJV1 201 aa16.62■□□□□ 0.25
PTPN13-205ENST00000502971 FABP5P3A8MUU1 101 aa16.62■□□□□ 0.25
PTPN13-205ENST00000502971 GZMBP10144 247 aa16.62■□□□□ 0.25
PTPN13-205ENST00000502971 ZNF80P51504 273 aaPredicted RBP16.62■□□□□ 0.25
PTPN13-205ENST00000502971 RPS20P60866 119 aaKnown RBP16.62■□□□□ 0.25
PTPN13-205ENST00000502971 KHDC1LQ5JSQ8 128 aa16.62■□□□□ 0.25
PTPN13-205ENST00000502971 OR1N2Q8NGR9 330 aa16.62■□□□□ 0.25
PTPN13-205ENST00000502971 IGKV3-7A0A075B6H7 116 aa16.62■□□□□ 0.25
PTPN13-205ENST00000502971 HBBP68871 147 aa16.62■□□□□ 0.25
PTPN13-205ENST00000502971 HIST3H2BBQ8N257 126 aa16.62■□□□□ 0.25
PTPN13-205ENST00000502971 OR11H1Q8NG94 326 aa16.62■□□□□ 0.25
PTPN13-205ENST00000502971 DCANP1Q8TF63 244 aa16.62■□□□□ 0.25
PTPN13-205ENST00000502971 M0QZ24 198 aa16.61■□□□□ 0.25
PTPN13-205ENST00000502971 SLURP1P55000 103 aa16.61■□□□□ 0.25
PTPN13-205ENST00000502971 DEFB136Q30KP8 78 aa16.61■□□□□ 0.25
PTPN13-205ENST00000502971 APCSP02743 223 aa16.6■□□□□ 0.25
PTPN13-205ENST00000502971 S100A8P05109 93 aa16.6■□□□□ 0.25
PTPN13-205ENST00000502971 KLHL30-AS1Q8NEE0 82 aa16.6■□□□□ 0.25
PTPN13-205ENST00000502971 PEMTQ9UBM1 199 aa16.6■□□□□ 0.25
PTPN13-205ENST00000502971 HAX1O00165 279 aa16.59■□□□□ 0.25
PTPN13-205ENST00000502971 GFI1BQ5VTD9 330 aa16.59■□□□□ 0.25
PTPN13-205ENST00000502971 MS4A6AQ9H2W1 248 aa16.59■□□□□ 0.25
PTPN13-205ENST00000502971 HIST1H1AQ02539 215 aaPredicted RBP16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms