RNA–Protein interactions for RNA: ENST00000501271.2

CLIP1-204, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 2,426 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-204ENST00000501271 A0A087X0K7 114 aa7.61□□□□□ -1.19
CLIP1-204ENST00000501271 IGHV3-74A0A0B4J1X5 117 aa7.61□□□□□ -1.19
CLIP1-204ENST00000501271 LOC389332A0A1B0GUA5 103 aa7.61□□□□□ -1.19
CLIP1-204ENST00000501271 FBLL1A6NHQ2 334 aaKnown RBP7.61□□□□□ -1.19
CLIP1-204ENST00000501271 IGLC6P0CF74 106 aa7.61□□□□□ -1.19
CLIP1-204ENST00000501271 MRPL51Q4U2R6 128 aaKnown RBP7.61□□□□□ -1.19
CLIP1-204ENST00000501271 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.61□□□□□ -1.19
CLIP1-204ENST00000501271 ZNF747Q9BV97 191 aa7.61□□□□□ -1.19
CLIP1-204ENST00000501271 SIGLEC8Q9NYZ4 499 aa7.61□□□□□ -1.19
CLIP1-204ENST00000501271 GOLT1BQ9Y3E0 138 aa7.61□□□□□ -1.19
CLIP1-204ENST00000501271 NCR2O95944 276 aa7.61□□□□□ -1.19
CLIP1-204ENST00000501271 LINC01545Q5VT33 79 aa7.61□□□□□ -1.19
CLIP1-204ENST00000501271 CYB5R2Q6BCY4 276 aa7.61□□□□□ -1.19
CLIP1-204ENST00000501271 TMEM219Q86XT9 240 aa7.61□□□□□ -1.19
CLIP1-204ENST00000501271 C5orf56Q8N8D9 126 aa7.61□□□□□ -1.19
CLIP1-204ENST00000501271 FER1L6-AS1Q8NA97 138 aa7.61□□□□□ -1.19
CLIP1-204ENST00000501271 PRELID3AQ96N28 172 aa7.61□□□□□ -1.19
CLIP1-204ENST00000501271 IGHV3OR16-10A0A075B7F0 116 aa7.6□□□□□ -1.19
CLIP1-204ENST00000501271 IGHV3-49A0A0A0MS15 119 aa7.6□□□□□ -1.19
CLIP1-204ENST00000501271 BMI1P35226 326 aa7.6□□□□□ -1.19
CLIP1-204ENST00000501271 Q6ZVH6 145 aa7.6□□□□□ -1.19
CLIP1-204ENST00000501271 ORMDL3Q8N138 153 aa7.6□□□□□ -1.19
CLIP1-204ENST00000501271 OR10AG1Q8NH19 301 aa7.6□□□□□ -1.19
CLIP1-204ENST00000501271 SMKR1H3BMG3 65 aa7.6□□□□□ -1.19
CLIP1-204ENST00000501271 ZNF207O43670 478 aaKnown RBP7.6□□□□□ -1.19
CLIP1-204ENST00000501271 GOSR1O95249 250 aa7.6□□□□□ -1.19
CLIP1-204ENST00000501271 IGHV4-39P01824 125 aa7.6□□□□□ -1.19
CLIP1-204ENST00000501271 FOSL1P15407 271 aa7.6□□□□□ -1.19
CLIP1-204ENST00000501271 GNLYP22749 145 aa7.6□□□□□ -1.19
CLIP1-204ENST00000501271 S100A7P31151 101 aa7.6□□□□□ -1.19
CLIP1-204ENST00000501271 RPS20P60866 119 aaKnown RBP7.6□□□□□ -1.19
CLIP1-204ENST00000501271 TWIST1Q15672 202 aa7.6□□□□□ -1.19
CLIP1-204ENST00000501271 IL17RELQ6ZVW7 336 aa7.6□□□□□ -1.19
CLIP1-204ENST00000501271 COL12A1Q99715 3063 aa7.6□□□□□ -1.19
CLIP1-204ENST00000501271 MSRB1Q9NZV6 116 aa7.6□□□□□ -1.19
CLIP1-204ENST00000501271 ORM1P02763 201 aa7.59□□□□□ -1.19
CLIP1-204ENST00000501271 RAB9AP51151 201 aa7.59□□□□□ -1.19
CLIP1-204ENST00000501271 FXYD7P58549 80 aa7.59□□□□□ -1.19
CLIP1-204ENST00000501271 EEF1AKMT3Q96AZ1 226 aa7.59□□□□□ -1.19
CLIP1-204ENST00000501271 SCRT2Q9NQ03 307 aa7.59□□□□□ -1.19
CLIP1-204ENST00000501271 TRAV8-2A0A0B4J237 113 aa7.59□□□□□ -1.19
CLIP1-204ENST00000501271 HSBP1L1C9JCN9 74 aa7.59□□□□□ -1.19
CLIP1-204ENST00000501271 NPYP01303 97 aa7.59□□□□□ -1.19
CLIP1-204ENST00000501271 SRSF2Q01130 221 aaKnown RBP7.59□□□□□ -1.19
CLIP1-204ENST00000501271 SLC50A1Q9BRV3 221 aa7.59□□□□□ -1.19
CLIP1-204ENST00000501271 PRORYQ9H606 182 aa7.59□□□□□ -1.19
CLIP1-204ENST00000501271 LINC00527Q9UJ94 153 aa7.59□□□□□ -1.19
CLIP1-204ENST00000501271 FABP5P3A8MUU1 101 aa7.58□□□□□ -1.2
CLIP1-204ENST00000501271 PAX8Q06710 450 aa7.58□□□□□ -1.2
CLIP1-204ENST00000501271 TRBV7-1A0A0A6YYK4 115 aa7.58□□□□□ -1.2
CLIP1-204ENST00000501271 RBAKDNA6NC62 111 aa7.58□□□□□ -1.2
CLIP1-204ENST00000501271 CKS2P33552 79 aa7.58□□□□□ -1.2
CLIP1-204ENST00000501271 LINC01559Q495D7 138 aa7.58□□□□□ -1.2
CLIP1-204ENST00000501271 SLC25A34Q6PIV7 304 aa7.58□□□□□ -1.2
CLIP1-204ENST00000501271 BRD3OSQ6XYD6 125 aa7.58□□□□□ -1.2
CLIP1-204ENST00000501271 OR8A1Q8NGG7 326 aa7.58□□□□□ -1.2
CLIP1-204ENST00000501271 RNF185Q96GF1 192 aa7.58□□□□□ -1.2
CLIP1-204ENST00000501271 CNFNQ9BYD5 112 aa7.58□□□□□ -1.2
CLIP1-204ENST00000501271 SPTAN1Q13813 2472 aaKnown RBP7.57□□□□□ -1.2
CLIP1-204ENST00000501271 GAS8-AS1O95177 125 aa7.57□□□□□ -1.2
CLIP1-204ENST00000501271 PPIFP30405 207 aaKnown RBP7.57□□□□□ -1.2
CLIP1-204ENST00000501271 MPV17L2Q567V2 206 aa7.57□□□□□ -1.2
CLIP1-204ENST00000501271 C19orf54Q5BKX5 351 aa7.57□□□□□ -1.2
CLIP1-204ENST00000501271 C8orf86Q6ZUL3 223 aa7.57□□□□□ -1.2
CLIP1-204ENST00000501271 PIFOQ8TCI5 191 aa7.57□□□□□ -1.2
CLIP1-204ENST00000501271 METTL26Q96S19 204 aa7.57□□□□□ -1.2
CLIP1-204ENST00000501271 AGPAT4-IT1Q9H0P7 198 aa7.57□□□□□ -1.2
CLIP1-204ENST00000501271 MOB4Q9Y3A3 225 aa7.57□□□□□ -1.2
CLIP1-204ENST00000501271 TRAV41A0A0B4J266 112 aa7.57□□□□□ -1.2
CLIP1-204ENST00000501271 PRSS57Q6UWY2 283 aa7.57□□□□□ -1.2
CLIP1-204ENST00000501271 MS4A6AQ9H2W1 248 aa7.57□□□□□ -1.2
CLIP1-204ENST00000501271 C11orf21Q9P2W6 132 aa7.57□□□□□ -1.2
CLIP1-204ENST00000501271 U3KQE9 123 aa7.57□□□□□ -1.2
CLIP1-204ENST00000501271 CELSR2Q9HCU4 2923 aa7.57□□□□□ -1.2
CLIP1-204ENST00000501271 TRAV40A0A0B4J280 105 aa7.56□□□□□ -1.2
CLIP1-204ENST00000501271 IGKV3D-20A0A0C4DH25 116 aa7.56□□□□□ -1.2
CLIP1-204ENST00000501271 SFTPCP11686 197 aa7.56□□□□□ -1.2
CLIP1-204ENST00000501271 ATP5G2Q06055 141 aa7.56□□□□□ -1.2
CLIP1-204ENST00000501271 COX11Q9Y6N1 276 aa7.56□□□□□ -1.2
CLIP1-204ENST00000501271 MAP1AP78559 2803 aaPredicted RBP7.56□□□□□ -1.2
CLIP1-204ENST00000501271 IGHV1-69DA0A0B4J2H0 117 aa7.56□□□□□ -1.2
CLIP1-204ENST00000501271 IGHV4-61A0A0C4DH41 118 aa7.56□□□□□ -1.2
CLIP1-204ENST00000501271 IGHV1-69P01742 117 aa7.56□□□□□ -1.2
CLIP1-204ENST00000501271 HBDP02042 147 aa7.56□□□□□ -1.2
CLIP1-204ENST00000501271 FOXE3Q13461 319 aa7.56□□□□□ -1.2
CLIP1-204ENST00000501271 ORAOV1Q8WV07 137 aa7.56□□□□□ -1.2
CLIP1-204ENST00000501271 PKD1L2Q7Z442 2459 aa7.55□□□□□ -1.2
CLIP1-204ENST00000501271 NUDT3O95989 172 aa7.55□□□□□ -1.2
CLIP1-204ENST00000501271 Q6ZQT7 251 aa7.55□□□□□ -1.2
CLIP1-204ENST00000501271 CFAP46Q8IYW2 2715 aa7.55□□□□□ -1.2
CLIP1-204ENST00000501271 TRBV12-3P01733 135 aa7.54□□□□□ -1.2
CLIP1-204ENST00000501271 TRGV3P03979 118 aa7.54□□□□□ -1.2
CLIP1-204ENST00000501271 CACNG7P62955 275 aa7.54□□□□□ -1.2
CLIP1-204ENST00000501271 BVES-AS1Q5T3Y7 98 aa7.54□□□□□ -1.2
CLIP1-204ENST00000501271 TMEM78Q5T7P6 136 aa7.54□□□□□ -1.2
CLIP1-204ENST00000501271 MRPL53Q96EL3 112 aaKnown RBP7.54□□□□□ -1.2
CLIP1-204ENST00000501271 FAM223BA6NKX1 122 aa7.54□□□□□ -1.2
CLIP1-204ENST00000501271 TCF21O43680 179 aa7.54□□□□□ -1.2
CLIP1-204ENST00000501271 IGHV4-38-2P0DP08 117 aa7.54□□□□□ -1.2
CLIP1-204ENST00000501271 COX8AP10176 69 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms