RNA–Protein interactions for RNA: ENST00000498041.1

RIF1-212, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 776 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-212ENST00000498041 Q8N976 141 aa1.62□□□□□ -2.15
RIF1-212ENST00000498041 NECAP1Q8NC96 275 aa1.62□□□□□ -2.15
RIF1-212ENST00000498041 OR11H6Q8NGC7 330 aa1.62□□□□□ -2.15
RIF1-212ENST00000498041 OR10X1Q8NGY0 326 aa1.62□□□□□ -2.15
RIF1-212ENST00000498041 TMEM167AQ8TBQ9 72 aa1.62□□□□□ -2.15
RIF1-212ENST00000498041 DTD1Q8TEA8 209 aa1.62□□□□□ -2.15
RIF1-212ENST00000498041 RAB1CQ92928 201 aa1.62□□□□□ -2.15
RIF1-212ENST00000498041 LSM10Q969L4 123 aaKnown RBP1.62□□□□□ -2.15
RIF1-212ENST00000498041 ISOC2Q96AB3 205 aa1.62□□□□□ -2.15
RIF1-212ENST00000498041 TVP23CQ96ET8 276 aa1.62□□□□□ -2.15
RIF1-212ENST00000498041 ACY3Q96HD9 319 aa1.62□□□□□ -2.15
RIF1-212ENST00000498041 FAM167A-AS1Q96KT0 104 aa1.62□□□□□ -2.15
RIF1-212ENST00000498041 TSNAXQ99598 290 aaKnown RBP1.62□□□□□ -2.15
RIF1-212ENST00000498041 HSD17B10Q99714 261 aaKnown RBP1.62□□□□□ -2.15
RIF1-212ENST00000498041 GGTLC1Q9BX51 225 aa1.62□□□□□ -2.15
RIF1-212ENST00000498041 SLC25A2Q9BXI2 301 aa1.62□□□□□ -2.15
RIF1-212ENST00000498041 WDR61Q9GZS3 305 aaKnown RBP1.62□□□□□ -2.15
RIF1-212ENST00000498041 NDUFA4L2Q9NRX3 87 aa1.62□□□□□ -2.15
RIF1-212ENST00000498041 CTNNBIP1Q9NSA3 81 aaPredicted RBP1.62□□□□□ -2.15
RIF1-212ENST00000498041 LYRM2Q9NU23 88 aaPredicted RBP1.62□□□□□ -2.15
RIF1-212ENST00000498041 COMMD9Q9P000 198 aa1.62□□□□□ -2.15
RIF1-212ENST00000498041 GLS2Q9UI32 602 aa1.62□□□□□ -2.15
RIF1-212ENST00000498041 JPT1Q9UK76 154 aa1.62□□□□□ -2.15
RIF1-212ENST00000498041 KCNIP3Q9Y2W7 256 aa1.62□□□□□ -2.15
RIF1-212ENST00000498041 LINC00312Q9Y6C7 94 aa1.62□□□□□ -2.15
RIF1-212ENST00000498041 ZFYVE26Q68DK2 2539 aa1.62□□□□□ -2.15
RIF1-212ENST00000498041 NBEAL1Q6ZS30 2694 aa1.62□□□□□ -2.15
RIF1-212ENST00000498041 TLN1Q9Y490 2541 aaKnown RBP1.61□□□□□ -2.15
RIF1-212ENST00000498041 TRBV20OR9-2A0A075B6H5 130 aa1.61□□□□□ -2.15
RIF1-212ENST00000498041 TRAV8-1A0A0A6YYK1 113 aa1.61□□□□□ -2.15
RIF1-212ENST00000498041 TGIF2-C20orf24A0A0A6YYL0 155 aa1.61□□□□□ -2.15
RIF1-212ENST00000498041 IGHV1-69DA0A0B4J2H0 117 aa1.61□□□□□ -2.15
RIF1-212ENST00000498041 LOC105371267A0A1B0GV96 52 aa1.61□□□□□ -2.15
RIF1-212ENST00000498041 KANTRA0A1W2PQU2 76 aa1.61□□□□□ -2.15
RIF1-212ENST00000498041 CLPSL1A2RUU4 121 aa1.61□□□□□ -2.15
RIF1-212ENST00000498041 IZUMO1RA6ND01 250 aa1.61□□□□□ -2.15
RIF1-212ENST00000498041 OR2T8A6NH00 312 aa1.61□□□□□ -2.15
RIF1-212ENST00000498041 SLC17A3O00476 420 aa1.61□□□□□ -2.15
RIF1-212ENST00000498041 MRPS12O15235 138 aaKnown RBP1.61□□□□□ -2.15
RIF1-212ENST00000498041 IFNA21P01568 189 aa1.61□□□□□ -2.15
RIF1-212ENST00000498041 IGLV2-8P01709 118 aa1.61□□□□□ -2.15
RIF1-212ENST00000498041 IGHV1-69P01742 117 aa1.61□□□□□ -2.15
RIF1-212ENST00000498041 RBP4P02753 201 aa1.61□□□□□ -2.15
RIF1-212ENST00000498041 CTXN2P0C2S0 81 aa1.61□□□□□ -2.15
RIF1-212ENST00000498041 CD28P10747 220 aa1.61□□□□□ -2.15
RIF1-212ENST00000498041 SLC25A6P12236 298 aa1.61□□□□□ -2.15
RIF1-212ENST00000498041 NQO2P16083 231 aa1.61□□□□□ -2.15
RIF1-212ENST00000498041 ORM2P19652 201 aa1.61□□□□□ -2.15
RIF1-212ENST00000498041 USF1P22415 310 aaPredicted RBP1.61□□□□□ -2.15
RIF1-212ENST00000498041 HTR1DP28221 377 aa1.61□□□□□ -2.15
RIF1-212ENST00000498041 SNCAP37840 140 aa1.61□□□□□ -2.15
RIF1-212ENST00000498041 RPL27AP46776 148 aaKnown RBP1.61□□□□□ -2.15
RIF1-212ENST00000498041 UBE2AP49459 152 aa1.61□□□□□ -2.15
RIF1-212ENST00000498041 SULT1A1P50225 295 aa1.61□□□□□ -2.15
RIF1-212ENST00000498041 SULT1A2P50226 295 aa1.61□□□□□ -2.15
RIF1-212ENST00000498041 CRIP1P50238 77 aa1.61□□□□□ -2.15
RIF1-212ENST00000498041 RND2P52198 227 aa1.61□□□□□ -2.15
RIF1-212ENST00000498041 TAS2R30P59541 319 aa1.61□□□□□ -2.15
RIF1-212ENST00000498041 RPS23P62266 143 aaKnown RBP1.61□□□□□ -2.15
RIF1-212ENST00000498041 SLC35B1P78383 322 aa1.61□□□□□ -2.15
RIF1-212ENST00000498041 RPL19P84098 196 aaKnown RBP1.61□□□□□ -2.15
RIF1-212ENST00000498041 MEF2CQ06413 473 aaPredicted RBP1.61□□□□□ -2.15
RIF1-212ENST00000498041 BAXQ07812 192 aa1.61□□□□□ -2.15
RIF1-212ENST00000498041 ZNF616Q08AN1 781 aa1.61□□□□□ -2.15
RIF1-212ENST00000498041 SURF2Q15527 256 aaPredicted RBP1.61□□□□□ -2.15
RIF1-212ENST00000498041 MMDQ15546 238 aa1.61□□□□□ -2.15
RIF1-212ENST00000498041 USF2Q15853 346 aaPredicted RBP1.61□□□□□ -2.15
RIF1-212ENST00000498041 GUK1Q16774 197 aa1.61□□□□□ -2.15
RIF1-212ENST00000498041 TMEM249Q2WGJ8 235 aa1.61□□□□□ -2.15
RIF1-212ENST00000498041 COA6Q5JTJ3 125 aaKnown RBP1.61□□□□□ -2.15
RIF1-212ENST00000498041 GDF5OSQ5U4N7 250 aa1.61□□□□□ -2.15
RIF1-212ENST00000498041 UNQ5815/PRO19632Q6UWF5 114 aa1.61□□□□□ -2.15
RIF1-212ENST00000498041 CLEC19AQ6UXS0 136 aa1.61□□□□□ -2.15
RIF1-212ENST00000498041 IQCF2Q8IXL9 164 aa1.61□□□□□ -2.15
RIF1-212ENST00000498041 Q8IYB0 196 aa1.61□□□□□ -2.15
RIF1-212ENST00000498041 RNF182Q8N6D2 247 aa1.61□□□□□ -2.15
RIF1-212ENST00000498041 TMEM75Q8N9X5 138 aa1.61□□□□□ -2.15
RIF1-212ENST00000498041 UBAC2Q8NBM4 344 aa1.61□□□□□ -2.15
RIF1-212ENST00000498041 OR10G4Q8NGN3 311 aa1.61□□□□□ -2.15
RIF1-212ENST00000498041 C15orf40Q8WUR7 153 aa1.61□□□□□ -2.15
RIF1-212ENST00000498041 SFT2D1Q8WV19 159 aa1.61□□□□□ -2.15
RIF1-212ENST00000498041 BLNKQ8WV28 456 aa1.61□□□□□ -2.15
RIF1-212ENST00000498041 THRSPQ92748 146 aa1.61□□□□□ -2.15
RIF1-212ENST00000498041 RPEQ96AT9 228 aa1.61□□□□□ -2.15
RIF1-212ENST00000498041 FLYWCH2Q96CP2 140 aaKnown RBP1.61□□□□□ -2.15
RIF1-212ENST00000498041 ATP5SQ99766 215 aa1.61□□□□□ -2.15
RIF1-212ENST00000498041 GON7Q9BXV9 100 aa1.61□□□□□ -2.15
RIF1-212ENST00000498041 RHOFQ9HBH0 211 aa1.61□□□□□ -2.15
RIF1-212ENST00000498041 SPACA1Q9HBV2 294 aa1.61□□□□□ -2.15
RIF1-212ENST00000498041 TREM1Q9NP99 234 aa1.61□□□□□ -2.15
RIF1-212ENST00000498041 PARP11Q9NR21 331 aa1.61□□□□□ -2.15
RIF1-212ENST00000498041 TMEM14BQ9NUH8 114 aa1.61□□□□□ -2.15
RIF1-212ENST00000498041 ZNF586Q9NXT0 402 aa1.61□□□□□ -2.15
RIF1-212ENST00000498041 GNG13Q9P2W3 67 aa1.61□□□□□ -2.15
RIF1-212ENST00000498041 WASHC3Q9Y3C0 194 aa1.61□□□□□ -2.15
RIF1-212ENST00000498041 PUS1Q9Y606 427 aaKnown RBP eCLIP1.61□□□□□ -2.15
RIF1-212ENST00000498041 PXMP4Q9Y6I8 212 aa1.61□□□□□ -2.15
RIF1-212ENST00000498041 TENM1Q9UKZ4 2725 aa1.61□□□□□ -2.15
RIF1-212ENST00000498041 SPTAN1Q13813 2472 aaKnown RBP1.61□□□□□ -2.15
RIF1-212ENST00000498041 RYR2Q92736 4967 aa1.61□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms