RNA–Protein interactions for RNA: ENST00000497251.1

TRAPPC3-207, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2

Gene TRAPPC3, Length 715 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-207ENST00000497251 FGF7P21781 194 aa11.68□□□□□ -0.54
TRAPPC3-207ENST00000497251 NHLH2Q02577 135 aa11.68□□□□□ -0.54
TRAPPC3-207ENST00000497251 GFI1BQ5VTD9 330 aa11.68□□□□□ -0.54
TRAPPC3-207ENST00000497251 SPATA12Q7Z6I5 190 aa11.68□□□□□ -0.54
TRAPPC3-207ENST00000497251 OR5C1Q8NGR4 320 aa11.68□□□□□ -0.54
TRAPPC3-207ENST00000497251 MRPL53Q96EL3 112 aaKnown RBP11.68□□□□□ -0.54
TRAPPC3-207ENST00000497251 SAT2Q96F10 170 aaPredicted RBP11.68□□□□□ -0.54
TRAPPC3-207ENST00000497251 MPC2O95563 127 aa11.67□□□□□ -0.54
TRAPPC3-207ENST00000497251 ZNF680Q8NEM1 530 aa11.67□□□□□ -0.54
TRAPPC3-207ENST00000497251 LINC00467Q9BRT7 94 aa11.67□□□□□ -0.54
TRAPPC3-207ENST00000497251 NPCDR1Q9BY65 106 aa11.67□□□□□ -0.54
TRAPPC3-207ENST00000497251 GAGE12BA1L429 117 aa11.66□□□□□ -0.54
TRAPPC3-207ENST00000497251 NPIPB6E9PJ23 425 aa11.66□□□□□ -0.54
TRAPPC3-207ENST00000497251 GAGE7O76087 117 aa11.66□□□□□ -0.54
TRAPPC3-207ENST00000497251 SLC25A5P05141 298 aaKnown RBP11.66□□□□□ -0.54
TRAPPC3-207ENST00000497251 GAGE12FP0CL80 117 aa11.66□□□□□ -0.54
TRAPPC3-207ENST00000497251 GAGE12GP0CL81 117 aa11.66□□□□□ -0.54
TRAPPC3-207ENST00000497251 GAGE12IP0CL82 117 aa11.66□□□□□ -0.54
TRAPPC3-207ENST00000497251 ESRGQ1W209 222 aa11.66□□□□□ -0.54
TRAPPC3-207ENST00000497251 MORN5Q5VZ52 161 aa11.66□□□□□ -0.54
TRAPPC3-207ENST00000497251 KCNIP2Q9NS61 270 aa11.66□□□□□ -0.54
TRAPPC3-207ENST00000497251 PRELID1Q9Y255 219 aa11.66□□□□□ -0.54
TRAPPC3-207ENST00000497251 LINC00477Q96M19 166 aa11.65□□□□□ -0.54
TRAPPC3-207ENST00000497251 ALG5Q9Y673 324 aa11.65□□□□□ -0.54
TRAPPC3-207ENST00000497251 NMBP08949 121 aa11.64□□□□□ -0.55
TRAPPC3-207ENST00000497251 HOXA5P20719 270 aa11.64□□□□□ -0.55
TRAPPC3-207ENST00000497251 SLAQ13239 276 aa11.64□□□□□ -0.55
TRAPPC3-207ENST00000497251 PDE6HQ13956 83 aa11.64□□□□□ -0.55
TRAPPC3-207ENST00000497251 ANXA2RQ3ZCQ2 193 aa11.64□□□□□ -0.55
TRAPPC3-207ENST00000497251 THAP6Q8TBB0 222 aa11.64□□□□□ -0.55
TRAPPC3-207ENST00000497251 WDR61Q9GZS3 305 aaKnown RBP11.64□□□□□ -0.55
TRAPPC3-207ENST00000497251 TRGV2A0A075B6R0 118 aa11.63□□□□□ -0.55
TRAPPC3-207ENST00000497251 TRAV12-3A0A0B4J271 114 aa11.63□□□□□ -0.55
TRAPPC3-207ENST00000497251 A0A0J9YY99 117 aa11.63□□□□□ -0.55
TRAPPC3-207ENST00000497251 PRAC2D3DTV9 90 aa11.63□□□□□ -0.55
TRAPPC3-207ENST00000497251 H3BQ15 152 aa11.63□□□□□ -0.55
TRAPPC3-207ENST00000497251 SLC17A3O00476 420 aa11.63□□□□□ -0.55
TRAPPC3-207ENST00000497251 CT45A10P0DMU9 189 aa11.63□□□□□ -0.55
TRAPPC3-207ENST00000497251 KIR3DS1Q14943 382 aa11.63□□□□□ -0.55
TRAPPC3-207ENST00000497251 ATP5SQ99766 215 aa11.63□□□□□ -0.55
TRAPPC3-207ENST00000497251 KRTAP1-5Q9BYS1 174 aa11.63□□□□□ -0.55
TRAPPC3-207ENST00000497251 SCRT2Q9NQ03 307 aa11.63□□□□□ -0.55
TRAPPC3-207ENST00000497251 PGPEP1Q9NXJ5 209 aa11.63□□□□□ -0.55
TRAPPC3-207ENST00000497251 TMEM14CQ9P0S9 112 aa11.63□□□□□ -0.55
TRAPPC3-207ENST00000497251 HSPB11Q9Y547 144 aa11.63□□□□□ -0.55
TRAPPC3-207ENST00000497251 TRAV5A0A0B4J249 113 aa11.62□□□□□ -0.55
TRAPPC3-207ENST00000497251 C17orf112F2Z3M2 114 aa11.62□□□□□ -0.55
TRAPPC3-207ENST00000497251 K7EP13 123 aa11.62□□□□□ -0.55
TRAPPC3-207ENST00000497251 EREGO14944 169 aa11.62□□□□□ -0.55
TRAPPC3-207ENST00000497251 RPL12P30050 165 aaKnown RBP11.62□□□□□ -0.55
TRAPPC3-207ENST00000497251 MBD2Q9UBB5 411 aa11.62□□□□□ -0.55
TRAPPC3-207ENST00000497251 C7orf71A4D174 169 aa11.61□□□□□ -0.55
TRAPPC3-207ENST00000497251 KLLNB2CW77 178 aa11.61□□□□□ -0.55
TRAPPC3-207ENST00000497251 IBA57Q5T440 356 aaKnown RBP11.61□□□□□ -0.55
TRAPPC3-207ENST00000497251 CDPF1Q6NVV7 123 aa11.61□□□□□ -0.55
TRAPPC3-207ENST00000497251 Q6ZTI0 123 aa11.61□□□□□ -0.55
TRAPPC3-207ENST00000497251 EIF4E3Q8N5X7 224 aaKnown RBP11.61□□□□□ -0.55
TRAPPC3-207ENST00000497251 TMPRSS5Q9H3S3 457 aa11.61□□□□□ -0.55
TRAPPC3-207ENST00000497251 DNAH5Q8TE73 4624 aa11.6□□□□□ -0.55
TRAPPC3-207ENST00000497251 TRBV19A0A075B6N1 114 aa11.6□□□□□ -0.55
TRAPPC3-207ENST00000497251 A0A096LPF7 62 aa11.6□□□□□ -0.55
TRAPPC3-207ENST00000497251 SIVA1O15304 175 aa11.6□□□□□ -0.55
TRAPPC3-207ENST00000497251 HIST1H1EP10412 219 aaKnown RBP11.6□□□□□ -0.55
TRAPPC3-207ENST00000497251 NFE4Q86UQ8 179 aa11.6□□□□□ -0.55
TRAPPC3-207ENST00000497251 VSIG2Q96IQ7 327 aa11.6□□□□□ -0.55
TRAPPC3-207ENST00000497251 MED28Q9H204 178 aa11.6□□□□□ -0.55
TRAPPC3-207ENST00000497251 ZNF586Q9NXT0 402 aa11.6□□□□□ -0.55
TRAPPC3-207ENST00000497251 ZNF324O75467 553 aaPredicted RBP11.59□□□□□ -0.55
TRAPPC3-207ENST00000497251 IFNA5P01569 189 aa11.59□□□□□ -0.55
TRAPPC3-207ENST00000497251 SNRPCP09234 159 aaKnown RBP11.59□□□□□ -0.55
TRAPPC3-207ENST00000497251 CRISP2P16562 243 aa11.59□□□□□ -0.55
TRAPPC3-207ENST00000497251 GCSAMLQ5JQS6 135 aa11.59□□□□□ -0.55
TRAPPC3-207ENST00000497251 C11orf72Q8NBR9 251 aa11.59□□□□□ -0.55
TRAPPC3-207ENST00000497251 ASB13Q8WXK3 278 aa11.59□□□□□ -0.55
TRAPPC3-207ENST00000497251 FAM19A4Q96LR4 140 aa11.59□□□□□ -0.55
TRAPPC3-207ENST00000497251 MRPL32Q9BYC8 188 aaKnown RBP11.59□□□□□ -0.55
TRAPPC3-207ENST00000497251 PARD6GQ9BYG4 376 aaPredicted RBP11.59□□□□□ -0.55
TRAPPC3-207ENST00000497251 AAMDCQ9H7C9 122 aa11.59□□□□□ -0.55
TRAPPC3-207ENST00000497251 GSN-AS1Q9NRJ2 163 aa11.59□□□□□ -0.55
TRAPPC3-207ENST00000497251 FUT9Q9Y231 359 aa11.59□□□□□ -0.55
TRAPPC3-207ENST00000497251 TRAV9-2A0A087WT02 112 aa11.58□□□□□ -0.56
TRAPPC3-207ENST00000497251 TRBV7-9A0A0J9YWB2 115 aa11.58□□□□□ -0.56
TRAPPC3-207ENST00000497251 H3BTX0 84 aa11.58□□□□□ -0.56
TRAPPC3-207ENST00000497251 SPINK4O60575 86 aa11.58□□□□□ -0.56
TRAPPC3-207ENST00000497251 TCL1AP56279 114 aa11.58□□□□□ -0.56
TRAPPC3-207ENST00000497251 KRTAP10-2P60368 255 aa11.58□□□□□ -0.56
TRAPPC3-207ENST00000497251 C9orf47Q6ZRZ4 202 aa11.58□□□□□ -0.56
TRAPPC3-207ENST00000497251 SCGB1C1Q8TD33 95 aa11.58□□□□□ -0.56
TRAPPC3-207ENST00000497251 ST6GAL2Q96JF0 529 aa11.58□□□□□ -0.56
TRAPPC3-207ENST00000497251 SLC25A2Q9BXI2 301 aa11.58□□□□□ -0.56
TRAPPC3-207ENST00000497251 TIMM9Q9Y5J7 89 aa11.58□□□□□ -0.56
TRAPPC3-207ENST00000497251 ICOSQ9Y6W8 199 aa11.58□□□□□ -0.56
TRAPPC3-207ENST00000497251 TRGV1A0A0A0MS02 117 aa11.57□□□□□ -0.56
TRAPPC3-207ENST00000497251 J3KRW8 73 aa11.57□□□□□ -0.56
TRAPPC3-207ENST00000497251 PAX4O43316 350 aa11.57□□□□□ -0.56
TRAPPC3-207ENST00000497251 LINC00315P59091 139 aa11.57□□□□□ -0.56
TRAPPC3-207ENST00000497251 FAM167A-AS1Q96KT0 104 aa11.57□□□□□ -0.56
TRAPPC3-207ENST00000497251 PRO0255Q9UI72 69 aa11.57□□□□□ -0.56
TRAPPC3-207ENST00000497251 GPX1P07203 203 aa11.56□□□□□ -0.56
TRAPPC3-207ENST00000497251 MRPL23Q16540 153 aaKnown RBP11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms