RNA–Protein interactions for RNA: ENST00000494748.1

SDF4-207, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 3,516 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-207ENST00000494748 AAMDCQ9H7C9 122 aa11.94□□□□□ -0.5
SDF4-207ENST00000494748 FBLL1A6NHQ2 334 aaKnown RBP11.94□□□□□ -0.5
SDF4-207ENST00000494748 SRSF2Q01130 221 aaKnown RBP11.94□□□□□ -0.5
SDF4-207ENST00000494748 FANCD2OSQ96PS1 177 aa11.94□□□□□ -0.5
SDF4-207ENST00000494748 NPIPB5A8MRT5 1133 aa11.94□□□□□ -0.5
SDF4-207ENST00000494748 E9PLD3 99 aa11.94□□□□□ -0.5
SDF4-207ENST00000494748 CIDEAO60543 219 aa11.93□□□□□ -0.5
SDF4-207ENST00000494748 GATA1P15976 413 aaPredicted RBP11.93□□□□□ -0.5
SDF4-207ENST00000494748 CEND1Q8N111 149 aa11.93□□□□□ -0.5
SDF4-207ENST00000494748 IGFBPL1Q8WX77 278 aa11.93□□□□□ -0.5
SDF4-207ENST00000494748 A0A0G2JNJ9 132 aa11.93□□□□□ -0.5
SDF4-207ENST00000494748 HLA-DRB4P13762 266 aa11.93□□□□□ -0.5
SDF4-207ENST00000494748 HLA-DMBP28068 263 aa11.93□□□□□ -0.5
SDF4-207ENST00000494748 Q6ZS92 163 aa11.93□□□□□ -0.5
SDF4-207ENST00000494748 RNF5Q99942 180 aa11.93□□□□□ -0.5
SDF4-207ENST00000494748 MAP1LC3AQ9H492 121 aa11.93□□□□□ -0.5
SDF4-207ENST00000494748 SPANXB1Q9NS25 103 aaPredicted RBP11.93□□□□□ -0.5
SDF4-207ENST00000494748 Q9UFV3 132 aa11.93□□□□□ -0.5
SDF4-207ENST00000494748 HLA-DRB4X5D2U9 266 aa11.93□□□□□ -0.5
SDF4-207ENST00000494748 BDP1A6H8Y1 2624 aa11.93□□□□□ -0.5
SDF4-207ENST00000494748 TNFRSF6BO95407 300 aa11.93□□□□□ -0.5
SDF4-207ENST00000494748 SAMD13Q5VXD3 122 aa11.93□□□□□ -0.5
SDF4-207ENST00000494748 MAPKAPK5-AS1Q8N8E1 139 aa11.93□□□□□ -0.5
SDF4-207ENST00000494748 IGKCP01834 107 aa11.92□□□□□ -0.5
SDF4-207ENST00000494748 IGFL4Q6B9Z1 124 aa11.92□□□□□ -0.5
SDF4-207ENST00000494748 FOXI2Q6ZQN5 318 aa11.92□□□□□ -0.5
SDF4-207ENST00000494748 GTSCR1Q86UQ5 136 aa11.92□□□□□ -0.5
SDF4-207ENST00000494748 FAM57AQ8TBR7 257 aa11.92□□□□□ -0.5
SDF4-207ENST00000494748 ZNF48Q96MX3 618 aaPredicted RBP11.92□□□□□ -0.5
SDF4-207ENST00000494748 IGLV11-55A0A075B6I3 123 aa11.92□□□□□ -0.5
SDF4-207ENST00000494748 AZU1P20160 251 aa11.91□□□□□ -0.5
SDF4-207ENST00000494748 COX7A1P24310 79 aa11.91□□□□□ -0.5
SDF4-207ENST00000494748 RALYQ9UKM9 306 aaKnown RBP11.91□□□□□ -0.5
SDF4-207ENST00000494748 TIMM23O14925 209 aa11.91□□□□□ -0.5
SDF4-207ENST00000494748 GNG7O60262 68 aa11.91□□□□□ -0.5
SDF4-207ENST00000494748 PIP4P1Q86T03 277 aa11.91□□□□□ -0.5
SDF4-207ENST00000494748 CNIH1O95406 144 aa11.91□□□□□ -0.5
SDF4-207ENST00000494748 RPL24P83731 157 aaKnown RBP11.91□□□□□ -0.5
SDF4-207ENST00000494748 WFDC2Q14508 124 aa11.91□□□□□ -0.5
SDF4-207ENST00000494748 PSMG4Q5JS54 123 aa11.91□□□□□ -0.5
SDF4-207ENST00000494748 CFHR4Q92496 578 aa11.91□□□□□ -0.5
SDF4-207ENST00000494748 RPEQ96AT9 228 aa11.91□□□□□ -0.5
SDF4-207ENST00000494748 RAB1BQ9H0U4 201 aa11.91□□□□□ -0.5
SDF4-207ENST00000494748 NHP2Q9NX24 153 aaKnown RBP11.91□□□□□ -0.5
SDF4-207ENST00000494748 LRBAP50851 2863 aa11.91□□□□□ -0.5
SDF4-207ENST00000494748 IGLL5B9A064 214 aa11.9□□□□□ -0.5
SDF4-207ENST00000494748 SRSF1Q07955 248 aaKnown RBP eCLIP11.9□□□□□ -0.5
SDF4-207ENST00000494748 PLGLAQ15195 96 aa11.9□□□□□ -0.5
SDF4-207ENST00000494748 ZNF672Q499Z4 452 aaPredicted RBP11.9□□□□□ -0.5
SDF4-207ENST00000494748 TMEM158Q8WZ71 300 aa11.9□□□□□ -0.5
SDF4-207ENST00000494748 TMEM8BA6NDV4 472 aa11.9□□□□□ -0.5
SDF4-207ENST00000494748 E7EQL1 145 aa11.9□□□□□ -0.5
SDF4-207ENST00000494748 NXT2Q9NPJ8 142 aaKnown RBP11.9□□□□□ -0.5
SDF4-207ENST00000494748 ZNF207O43670 478 aaKnown RBP11.9□□□□□ -0.51
SDF4-207ENST00000494748 NDUFA3O95167 84 aa11.9□□□□□ -0.51
SDF4-207ENST00000494748 ZC2HC1BQ5TFG8 222 aa11.9□□□□□ -0.51
SDF4-207ENST00000494748 FOXC2Q99958 501 aa11.9□□□□□ -0.51
SDF4-207ENST00000494748 SMPXQ9UHP9 88 aa11.89□□□□□ -0.51
SDF4-207ENST00000494748 SCGB1A1P11684 91 aa11.89□□□□□ -0.51
SDF4-207ENST00000494748 NPBQ8NG41 125 aa11.89□□□□□ -0.51
SDF4-207ENST00000494748 GTSF1LQ9H1H1 148 aa11.89□□□□□ -0.51
SDF4-207ENST00000494748 PRO0461Q9UI25 63 aa11.89□□□□□ -0.51
SDF4-207ENST00000494748 ARHGAP32A7KAX9 2087 aa11.89□□□□□ -0.51
SDF4-207ENST00000494748 DPM2O94777 84 aa11.89□□□□□ -0.51
SDF4-207ENST00000494748 BMI1P35226 326 aa11.89□□□□□ -0.51
SDF4-207ENST00000494748 Q8N8P6 123 aa11.88□□□□□ -0.51
SDF4-207ENST00000494748 NBR2O15453 112 aa11.88□□□□□ -0.51
SDF4-207ENST00000494748 FTH1P19P0C7X4 201 aa11.88□□□□□ -0.51
SDF4-207ENST00000494748 LINC01559Q495D7 138 aa11.88□□□□□ -0.51
SDF4-207ENST00000494748 Q5PR19 223 aa11.88□□□□□ -0.51
SDF4-207ENST00000494748 DTX2Q86UW9 622 aa11.88□□□□□ -0.51
SDF4-207ENST00000494748 DYNAPQ8N1N2 210 aa11.88□□□□□ -0.51
SDF4-207ENST00000494748 DEFB123Q8N688 67 aa11.88□□□□□ -0.51
SDF4-207ENST00000494748 TSSC4Q9Y5U2 329 aaPredicted RBP11.88□□□□□ -0.51
SDF4-207ENST00000494748 SPAARA0A1B0GVQ0 90 aa11.87□□□□□ -0.51
SDF4-207ENST00000494748 LYNX1G3V0Z9 82 aa11.87□□□□□ -0.51
SDF4-207ENST00000494748 PRSS1P07477 247 aa11.87□□□□□ -0.51
SDF4-207ENST00000494748 LYNX1P0DP58 116 aa11.87□□□□□ -0.51
SDF4-207ENST00000494748 NDPQ00604 133 aa11.87□□□□□ -0.51
SDF4-207ENST00000494748 NRACQ8N912 160 aa11.87□□□□□ -0.51
SDF4-207ENST00000494748 SPATA25Q9BR10 227 aa11.87□□□□□ -0.51
SDF4-207ENST00000494748 MRPL35Q9NZE8 188 aaKnown RBP11.87□□□□□ -0.51
SDF4-207ENST00000494748 TRAV40A0A0B4J280 105 aa11.87□□□□□ -0.51
SDF4-207ENST00000494748 PRAC2D3DTV9 90 aa11.87□□□□□ -0.51
SDF4-207ENST00000494748 TRGV3P03979 118 aa11.87□□□□□ -0.51
SDF4-207ENST00000494748 C11orf21Q9P2W6 132 aa11.87□□□□□ -0.51
SDF4-207ENST00000494748 AKAP13Q12802 2813 aa11.87□□□□□ -0.51
SDF4-207ENST00000494748 F8W1H4 67 aa11.87□□□□□ -0.51
SDF4-207ENST00000494748 ERCC8Q13216 396 aa11.87□□□□□ -0.51
SDF4-207ENST00000494748 S100A7AQ86SG5 101 aa11.87□□□□□ -0.51
SDF4-207ENST00000494748 ATP5LO75964 103 aa11.86□□□□□ -0.51
SDF4-207ENST00000494748 MFAP4P55083 255 aa11.86□□□□□ -0.51
SDF4-207ENST00000494748 CD300EQ496F6 205 aaPredicted RBP11.86□□□□□ -0.51
SDF4-207ENST00000494748 GAGE12HA6NDE8 117 aa11.86□□□□□ -0.51
SDF4-207ENST00000494748 PRRG2O14669 202 aa11.86□□□□□ -0.51
SDF4-207ENST00000494748 IGHV3-23P01764 117 aa11.86□□□□□ -0.51
SDF4-207ENST00000494748 RPL7P18124 248 aaKnown RBP11.86□□□□□ -0.51
SDF4-207ENST00000494748 PPIFP30405 207 aaKnown RBP11.86□□□□□ -0.51
SDF4-207ENST00000494748 C12orf74Q32Q52 190 aa11.86□□□□□ -0.51
SDF4-207ENST00000494748 IGKV3D-20A0A0C4DH25 116 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms